RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SUPT16HQ9Y5B9 1047 aaKnown RBP19.1■□□□□ 0.65
SLC28A1-201ENST00000286749 SETD5Q9C0A6 1442 aa19.1■□□□□ 0.65
SLC28A1-201ENST00000286749 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
SLC28A1-201ENST00000286749 CFAP43Q8NDM7 1665 aa19.09■□□□□ 0.65
SLC28A1-201ENST00000286749 PHLDB1Q86UU1 1377 aa19.09■□□□□ 0.65
SLC28A1-201ENST00000286749 PCF11O94913 1555 aaKnown RBP19.07■□□□□ 0.64
SLC28A1-201ENST00000286749 FHAD1B1AJZ9 1412 aa19.04■□□□□ 0.64
SLC28A1-201ENST00000286749 FAM50AQ14320 339 aaKnown RBP19.04■□□□□ 0.64
SLC28A1-201ENST00000286749 WDR97A6NE52 1622 aa19.02■□□□□ 0.64
SLC28A1-201ENST00000286749 P3H3Q8IVL6 736 aa19.02■□□□□ 0.64
SLC28A1-201ENST00000286749 KCNH8Q96L42 1107 aa19.01■□□□□ 0.63
SLC28A1-201ENST00000286749 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
SLC28A1-201ENST00000286749 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
SLC28A1-201ENST00000286749 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
SLC28A1-201ENST00000286749 FANCD2Q9BXW9 1451 aa18.94■□□□□ 0.62
SLC28A1-201ENST00000286749 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
SLC28A1-201ENST00000286749 DDX10Q13206 875 aaKnown RBP18.92■□□□□ 0.62
SLC28A1-201ENST00000286749 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
SLC28A1-201ENST00000286749 EFCAB5A4FU69 1503 aa18.91■□□□□ 0.62
SLC28A1-201ENST00000286749 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
SLC28A1-201ENST00000286749 CTTNBP2Q8WZ74 1663 aa18.9■□□□□ 0.62
SLC28A1-201ENST00000286749 CASKIN1Q8WXD9 1431 aa18.89■□□□□ 0.61
SLC28A1-201ENST00000286749 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
SLC28A1-201ENST00000286749 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
SLC28A1-201ENST00000286749 CUL7Q14999 1698 aa18.86■□□□□ 0.61
SLC28A1-201ENST00000286749 AQRO60306 1485 aaKnown RBP eCLIP18.86■□□□□ 0.61
SLC28A1-201ENST00000286749 TIMELESSQ9UNS1 1208 aa18.86■□□□□ 0.61
SLC28A1-201ENST00000286749 TOPBP1Q92547 1522 aa18.85■□□□□ 0.61
SLC28A1-201ENST00000286749 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
SLC28A1-201ENST00000286749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
SLC28A1-201ENST00000286749 HIRIP3Q9BW71 556 aaPredicted RBP18.84■□□□□ 0.61
SLC28A1-201ENST00000286749 TSHZ2Q9NRE2 1034 aa18.83■□□□□ 0.61
SLC28A1-201ENST00000286749 FGD6Q6ZV73 1430 aa18.81■□□□□ 0.6
SLC28A1-201ENST00000286749 FMN1Q68DA7 1419 aa18.79■□□□□ 0.6
SLC28A1-201ENST00000286749 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
SLC28A1-201ENST00000286749 CCDC18Q5T9S5 1454 aa18.78■□□□□ 0.6
SLC28A1-201ENST00000286749 NESP48681 1621 aa18.77■□□□□ 0.6
SLC28A1-201ENST00000286749 LRRIQ1Q96JM4 1722 aa18.77■□□□□ 0.6
SLC28A1-201ENST00000286749 BCANQ96GW7 911 aa18.77■□□□□ 0.6
SLC28A1-201ENST00000286749 MTUS2Q5JR59 1369 aa18.75■□□□□ 0.59
SLC28A1-201ENST00000286749 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
SLC28A1-201ENST00000286749 FKBP8Q14318 412 aa18.74■□□□□ 0.59
SLC28A1-201ENST00000286749 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
SLC28A1-201ENST00000286749 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
SLC28A1-201ENST00000286749 ANP32CO43423 234 aa18.72■□□□□ 0.59
SLC28A1-201ENST00000286749 HFM1A2PYH4 1435 aa18.72■□□□□ 0.59
SLC28A1-201ENST00000286749 SAMD9Q5K651 1589 aa18.72■□□□□ 0.59
SLC28A1-201ENST00000286749 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
SLC28A1-201ENST00000286749 UACAQ9BZF9 1416 aa18.71■□□□□ 0.59
SLC28A1-201ENST00000286749 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
SLC28A1-201ENST00000286749 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
SLC28A1-201ENST00000286749 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
SLC28A1-201ENST00000286749 SUPT6HQ7KZ85 1726 aaKnown RBP18.67■□□□□ 0.58
SLC28A1-201ENST00000286749 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
SLC28A1-201ENST00000286749 MYOM3Q5VTT5 1437 aa18.67■□□□□ 0.58
SLC28A1-201ENST00000286749 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
SLC28A1-201ENST00000286749 NAIPQ13075 1403 aa18.66■□□□□ 0.58
SLC28A1-201ENST00000286749 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
SLC28A1-201ENST00000286749 NEFLP07196 543 aa18.63■□□□□ 0.57
SLC28A1-201ENST00000286749 THOC2Q8NI27 1593 aaKnown RBP18.63■□□□□ 0.57
SLC28A1-201ENST00000286749 EHBP1L1Q8N3D4 1523 aa18.62■□□□□ 0.57
SLC28A1-201ENST00000286749 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
SLC28A1-201ENST00000286749 KDM5BQ9UGL1 1544 aa18.61■□□□□ 0.57
SLC28A1-201ENST00000286749 LAMC3Q9Y6N6 1575 aa18.6■□□□□ 0.57
SLC28A1-201ENST00000286749 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
SLC28A1-201ENST00000286749 KIF21AQ7Z4S6 1674 aa18.58■□□□□ 0.57
SLC28A1-201ENST00000286749 MAGI3Q5TCQ9 1506 aa18.57■□□□□ 0.56
SLC28A1-201ENST00000286749 ARHGEF11O15085 1522 aa18.55■□□□□ 0.56
SLC28A1-201ENST00000286749 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
SLC28A1-201ENST00000286749 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
SLC28A1-201ENST00000286749 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
SLC28A1-201ENST00000286749 HECW1Q76N89 1606 aa18.53■□□□□ 0.56
SLC28A1-201ENST00000286749 CHIC2Q9UKJ5 165 aa18.52■□□□□ 0.55
SLC28A1-201ENST00000286749 TCOF1Q13428 1488 aaKnown RBP18.5■□□□□ 0.55
SLC28A1-201ENST00000286749 KDM6BO15054 1643 aa18.5■□□□□ 0.55
SLC28A1-201ENST00000286749 DENND4BO75064 1496 aaPredicted RBP18.49■□□□□ 0.55
SLC28A1-201ENST00000286749 HSPA5P11021 654 aaKnown RBP18.47■□□□□ 0.55
SLC28A1-201ENST00000286749 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
SLC28A1-201ENST00000286749 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
SLC28A1-201ENST00000286749 TARBP1Q13395 1621 aaKnown RBP18.46■□□□□ 0.55
SLC28A1-201ENST00000286749 PDS5BQ9NTI5 1447 aa18.45■□□□□ 0.54
SLC28A1-201ENST00000286749 RBM19Q9Y4C8 960 aaKnown RBP18.45■□□□□ 0.54
SLC28A1-201ENST00000286749 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
SLC28A1-201ENST00000286749 EPRSP07814 1512 aaKnown RBP18.44■□□□□ 0.54
SLC28A1-201ENST00000286749 AKNAQ7Z591 1439 aa18.44■□□□□ 0.54
SLC28A1-201ENST00000286749 CDK13Q14004 1512 aaKnown RBP18.42■□□□□ 0.54
SLC28A1-201ENST00000286749 IQGAP2Q13576 1575 aa18.42■□□□□ 0.54
SLC28A1-201ENST00000286749 EIF4G2P78344 907 aaKnown RBP eCLIP18.4■□□□□ 0.54
SLC28A1-201ENST00000286749 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.54
SLC28A1-201ENST00000286749 MIA2Q96PC5 1412 aa18.38■□□□□ 0.53
SLC28A1-201ENST00000286749 WDR62O43379 1518 aa18.38■□□□□ 0.53
SLC28A1-201ENST00000286749 ARID3CA6NKF2 412 aa18.38■□□□□ 0.53
SLC28A1-201ENST00000286749 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
SLC28A1-201ENST00000286749 FOXD1Q16676 465 aa18.37■□□□□ 0.53
SLC28A1-201ENST00000286749 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
SLC28A1-201ENST00000286749 L3MBTL2Q969R5 705 aa18.36■□□□□ 0.53
SLC28A1-201ENST00000286749 ADAMTS12P58397 1594 aa18.36■□□□□ 0.53
SLC28A1-201ENST00000286749 CCDC184Q52MB2 194 aa18.33■□□□□ 0.53
SLC28A1-201ENST00000286749 C11orf95C9JLR9 678 aaPredicted RBP18.32■□□□□ 0.52
SLC28A1-201ENST00000286749 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms