RNA–Protein interactions for RNA: ENST00000278426.7

SLC43A1-201, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-201ENST00000278426 MAPKBP1O60336 1514 aa25.75■■□□□ 1.71
SLC43A1-201ENST00000278426 PHLDB1Q86UU1 1377 aa25.74■■□□□ 1.71
SLC43A1-201ENST00000278426 CADPSQ9ULU8 1353 aa25.74■■□□□ 1.71
SLC43A1-201ENST00000278426 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
SLC43A1-201ENST00000278426 LRRC9Q6ZRR7 1453 aa25.72■■□□□ 1.71
SLC43A1-201ENST00000278426 ANP32EQ9BTT0 268 aa25.72■■□□□ 1.71
SLC43A1-201ENST00000278426 SETD5Q9C0A6 1442 aa25.72■■□□□ 1.71
SLC43A1-201ENST00000278426 SIN3AQ96ST3 1273 aa25.72■■□□□ 1.71
SLC43A1-201ENST00000278426 MAP3K1Q13233 1512 aa25.7■■□□□ 1.7
SLC43A1-201ENST00000278426 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
SLC43A1-201ENST00000278426 DDX10Q13206 875 aaKnown RBP25.64■■□□□ 1.7
SLC43A1-201ENST00000278426 FKBP8Q14318 412 aa25.64■■□□□ 1.69
SLC43A1-201ENST00000278426 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
SLC43A1-201ENST00000278426 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
SLC43A1-201ENST00000278426 PCF11O94913 1555 aaKnown RBP25.57■■□□□ 1.68
SLC43A1-201ENST00000278426 FHOD3Q2V2M9 1422 aa25.56■■□□□ 1.68
SLC43A1-201ENST00000278426 HIRIP3Q9BW71 556 aaPredicted RBP25.54■■□□□ 1.68
SLC43A1-201ENST00000278426 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
SLC43A1-201ENST00000278426 FANCD2Q9BXW9 1451 aa25.5■■□□□ 1.67
SLC43A1-201ENST00000278426 PPP1R15AO75807 674 aaPredicted RBP25.49■■□□□ 1.67
SLC43A1-201ENST00000278426 CFAP43Q8NDM7 1665 aa25.49■■□□□ 1.67
SLC43A1-201ENST00000278426 TRIM52Q96A61 297 aa25.44■■□□□ 1.66
SLC43A1-201ENST00000278426 TIMELESSQ9UNS1 1208 aa25.41■■□□□ 1.66
SLC43A1-201ENST00000278426 FYCO1Q9BQS8 1478 aa25.4■■□□□ 1.66
SLC43A1-201ENST00000278426 CASKIN1Q8WXD9 1431 aa25.39■■□□□ 1.66
SLC43A1-201ENST00000278426 RBM19Q9Y4C8 960 aaKnown RBP25.39■■□□□ 1.66
SLC43A1-201ENST00000278426 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
SLC43A1-201ENST00000278426 NEFLP07196 543 aa25.38■■□□□ 1.65
SLC43A1-201ENST00000278426 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
SLC43A1-201ENST00000278426 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
SLC43A1-201ENST00000278426 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
SLC43A1-201ENST00000278426 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
SLC43A1-201ENST00000278426 EFCAB5A4FU69 1503 aa25.33■■□□□ 1.65
SLC43A1-201ENST00000278426 NESP48681 1621 aa25.32■■□□□ 1.64
SLC43A1-201ENST00000278426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.32■■□□□ 1.64
SLC43A1-201ENST00000278426 BCL11AQ9H165 835 aa25.32■■□□□ 1.64
SLC43A1-201ENST00000278426 FGD6Q6ZV73 1430 aa25.31■■□□□ 1.64
SLC43A1-201ENST00000278426 CCER2I3L3R5 266 aa25.31■■□□□ 1.64
SLC43A1-201ENST00000278426 ANP32CO43423 234 aa25.31■■□□□ 1.64
SLC43A1-201ENST00000278426 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.644e-7■■■■□ 21.6
SLC43A1-201ENST00000278426 MTUS2Q5JR59 1369 aa25.29■■□□□ 1.64
SLC43A1-201ENST00000278426 TONSLQ96HA7 1378 aa25.28■■□□□ 1.64
SLC43A1-201ENST00000278426 PTPRKQ15262 1439 aa25.27■■□□□ 1.64
SLC43A1-201ENST00000278426 FMN1Q68DA7 1419 aa25.27■■□□□ 1.64
SLC43A1-201ENST00000278426 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
SLC43A1-201ENST00000278426 CTTNBP2Q8WZ74 1663 aa25.24■■□□□ 1.63
SLC43A1-201ENST00000278426 CUL7Q14999 1698 aa25.23■■□□□ 1.63
SLC43A1-201ENST00000278426 SNAPC4Q5SXM2 1469 aa25.23■■□□□ 1.63
SLC43A1-201ENST00000278426 TDRD9Q8NDG6 1382 aaKnown RBP25.22■■□□□ 1.63
SLC43A1-201ENST00000278426 HFM1A2PYH4 1435 aa25.18■■□□□ 1.62
SLC43A1-201ENST00000278426 UACAQ9BZF9 1416 aa25.17■■□□□ 1.62
SLC43A1-201ENST00000278426 MSH5O43196 834 aa25.15■■□□□ 1.62
SLC43A1-201ENST00000278426 NCOA2Q15596 1464 aa25.14■■□□□ 1.62
SLC43A1-201ENST00000278426 PTPN23Q9H3S7 1636 aa25.14■■□□□ 1.61
SLC43A1-201ENST00000278426 NAIPQ13075 1403 aa25.13■■□□□ 1.61
SLC43A1-201ENST00000278426 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
SLC43A1-201ENST00000278426 MYOM3Q5VTT5 1437 aa25.11■■□□□ 1.61
SLC43A1-201ENST00000278426 IRX6P78412 446 aaPredicted RBP25.11■■□□□ 1.61
SLC43A1-201ENST00000278426 LRRIQ1Q96JM4 1722 aa25.11■■□□□ 1.61
SLC43A1-201ENST00000278426 RRP7BPQ9NSQ0 103 aa25.09■■□□□ 1.61
SLC43A1-201ENST00000278426 CHIC2Q9UKJ5 165 aa25.09■■□□□ 1.61
SLC43A1-201ENST00000278426 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
SLC43A1-201ENST00000278426 SAMD9Q5K651 1589 aa25.06■■□□□ 1.6
SLC43A1-201ENST00000278426 GAPVD1Q14C86 1478 aa25.06■■□□□ 1.6
SLC43A1-201ENST00000278426 HNRNPUQ00839 825 aaKnown RBP eCLIP25.05■■□□□ 1.6
SLC43A1-201ENST00000278426 SUPT6HQ7KZ85 1726 aaKnown RBP25■■□□□ 1.59
SLC43A1-201ENST00000278426 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
SLC43A1-201ENST00000278426 KDM5BQ9UGL1 1544 aa24.98■■□□□ 1.59
SLC43A1-201ENST00000278426 MAGI3Q5TCQ9 1506 aa24.97■■□□□ 1.59
SLC43A1-201ENST00000278426 EHBP1L1Q8N3D4 1523 aa24.97■■□□□ 1.59
SLC43A1-201ENST00000278426 ARID3CA6NKF2 412 aa24.96■■□□□ 1.59
SLC43A1-201ENST00000278426 HSPA5P11021 654 aaKnown RBP24.96■■□□□ 1.59
SLC43A1-201ENST00000278426 UGGT2Q9NYU1 1516 aa24.95■■□□□ 1.58
SLC43A1-201ENST00000278426 WASHC2AQ641Q2 1341 aa24.93■■□□□ 1.58
SLC43A1-201ENST00000278426 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
SLC43A1-201ENST00000278426 CDK11AQ9UQ88 783 aaPredicted RBP24.93■■□□□ 1.58
SLC43A1-201ENST00000278426 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
SLC43A1-201ENST00000278426 THOC2Q8NI27 1593 aaKnown RBP24.92■■□□□ 1.58
SLC43A1-201ENST00000278426 FANCIQ9NVI1 1328 aa24.91■■□□□ 1.58
SLC43A1-201ENST00000278426 FOXD1Q16676 465 aa24.9■■□□□ 1.58
SLC43A1-201ENST00000278426 DENND4BO75064 1496 aaPredicted RBP24.89■■□□□ 1.58
SLC43A1-201ENST00000278426 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
SLC43A1-201ENST00000278426 CCDC184Q52MB2 194 aa24.87■■□□□ 1.57
SLC43A1-201ENST00000278426 MPHOSPH9Q99550 1183 aa24.87■■□□□ 1.57
SLC43A1-201ENST00000278426 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
SLC43A1-201ENST00000278426 KDM6BO15054 1643 aa24.86■■□□□ 1.57
SLC43A1-201ENST00000278426 EIF4G2P78344 907 aaKnown RBP eCLIP24.85■■□□□ 1.574e-7■■■■□ 21.5
SLC43A1-201ENST00000278426 L3MBTL2Q969R5 705 aa24.84■■□□□ 1.57
SLC43A1-201ENST00000278426 TCOF1Q13428 1488 aaKnown RBP24.83■■□□□ 1.57
SLC43A1-201ENST00000278426 ERICH6Q7L0X2 663 aa24.81■■□□□ 1.56
SLC43A1-201ENST00000278426 EPRSP07814 1512 aaKnown RBP24.8■■□□□ 1.56
SLC43A1-201ENST00000278426 CDK13Q14004 1512 aaKnown RBP24.8■■□□□ 1.56
SLC43A1-201ENST00000278426 C11orf95C9JLR9 678 aaPredicted RBP24.79■■□□□ 1.56
SLC43A1-201ENST00000278426 GCC2Q8IWJ2 1684 aa24.78■■□□□ 1.56
SLC43A1-201ENST00000278426 HECW1Q76N89 1606 aa24.77■■□□□ 1.56
SLC43A1-201ENST00000278426 PPP4R2Q9NY27 417 aa24.77■■□□□ 1.56
SLC43A1-201ENST00000278426 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
SLC43A1-201ENST00000278426 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
SLC43A1-201ENST00000278426 AKNAQ7Z591 1439 aa24.73■■□□□ 1.55
SLC43A1-201ENST00000278426 FAM9BQ8IZU0 186 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms