RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 ZNF316A6NFI3 1004 aaPredicted RBP29.95■■■□□ 2.38
RAB5A-201ENST00000273047 PDS5BQ9NTI5 1447 aa29.94■■■□□ 2.38
RAB5A-201ENST00000273047 TIAM1Q13009 1591 aa29.94■■■□□ 2.38
RAB5A-201ENST00000273047 DHX57Q6P158 1386 aaKnown RBP29.9■■■□□ 2.38
RAB5A-201ENST00000273047 PCF11O94913 1555 aaKnown RBP29.89■■■□□ 2.38
RAB5A-201ENST00000273047 WDR97A6NE52 1622 aa29.88■■■□□ 2.37
RAB5A-201ENST00000273047 ACIN1Q9UKV3 1341 aaKnown RBP29.86■■■□□ 2.37
RAB5A-201ENST00000273047 CUL7Q14999 1698 aa29.86■■■□□ 2.37
RAB5A-201ENST00000273047 LRRC9Q6ZRR7 1453 aa29.85■■■□□ 2.37
RAB5A-201ENST00000273047 GAPVD1Q14C86 1478 aa29.84■■■□□ 2.37
RAB5A-201ENST00000273047 PHLDB1Q86UU1 1377 aa29.83■■■□□ 2.37
RAB5A-201ENST00000273047 FHAD1B1AJZ9 1412 aa29.83■■■□□ 2.37
RAB5A-201ENST00000273047 ABCA5Q8WWZ7 1642 aa29.8■■■□□ 2.36
RAB5A-201ENST00000273047 CTTNBP2Q8WZ74 1663 aa29.8■■■□□ 2.36
RAB5A-201ENST00000273047 NEUROD1Q13562 356 aa29.78■■■□□ 2.36
RAB5A-201ENST00000273047 FAM50AQ14320 339 aaKnown RBP29.78■■■□□ 2.36
RAB5A-201ENST00000273047 MAP3K1Q13233 1512 aa29.75■■■□□ 2.35
RAB5A-201ENST00000273047 CFAP43Q8NDM7 1665 aa29.69■■■□□ 2.34
RAB5A-201ENST00000273047 EFCAB5A4FU69 1503 aa29.68■■■□□ 2.34
RAB5A-201ENST00000273047 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
RAB5A-201ENST00000273047 AQRO60306 1485 aaKnown RBP eCLIP29.67■■■□□ 2.342e-6■■■□□ 15.4
RAB5A-201ENST00000273047 RAB3GAP2Q9H2M9 1393 aa29.67■■■□□ 2.34
RAB5A-201ENST00000273047 CASKIN1Q8WXD9 1431 aa29.65■■■□□ 2.34
RAB5A-201ENST00000273047 FYCO1Q9BQS8 1478 aa29.64■■■□□ 2.34
RAB5A-201ENST00000273047 CLSPNQ9HAW4 1339 aa29.6■■■□□ 2.33
RAB5A-201ENST00000273047 MIER1Q8N108 512 aa29.58■■■□□ 2.33
RAB5A-201ENST00000273047 SNAPC4Q5SXM2 1469 aa29.57■■■□□ 2.32
RAB5A-201ENST00000273047 FMN1Q68DA7 1419 aa29.57■■■□□ 2.32
RAB5A-201ENST00000273047 GTF3C3Q9Y5Q9 886 aa29.56■■■□□ 2.32
RAB5A-201ENST00000273047 CENPBP07199 599 aaPredicted RBP29.52■■■□□ 2.32
RAB5A-201ENST00000273047 YTHDC1Q96MU7 727 aaKnown RBP29.52■■■□□ 2.32
RAB5A-201ENST00000273047 SAMD9Q5K651 1589 aa29.52■■■□□ 2.32
RAB5A-201ENST00000273047 LRRIQ1Q96JM4 1722 aa29.51■■■□□ 2.32
RAB5A-201ENST00000273047 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
RAB5A-201ENST00000273047 SETD5Q9C0A6 1442 aa29.5■■■□□ 2.31
RAB5A-201ENST00000273047 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
RAB5A-201ENST00000273047 MTUS2Q5JR59 1369 aa29.49■■■□□ 2.31
RAB5A-201ENST00000273047 ZNF608Q9ULD9 1512 aaPredicted RBP29.48■■■□□ 2.31
RAB5A-201ENST00000273047 ARID3CA6NKF2 412 aa29.47■■■□□ 2.31
RAB5A-201ENST00000273047 MAPKBP1O60336 1514 aa29.44■■■□□ 2.3
RAB5A-201ENST00000273047 SIN3AQ96ST3 1273 aa29.41■■■□□ 2.3
RAB5A-201ENST00000273047 GRIN2BQ13224 1484 aa29.4■■■□□ 2.3
RAB5A-201ENST00000273047 FGD6Q6ZV73 1430 aa29.37■■■□□ 2.29
RAB5A-201ENST00000273047 MYT1Q01538 1121 aa29.36■■■□□ 2.29
RAB5A-201ENST00000273047 ADAMTS12P58397 1594 aa29.36■■■□□ 2.29
RAB5A-201ENST00000273047 NCOA2Q15596 1464 aa29.31■■■□□ 2.28
RAB5A-201ENST00000273047 IQGAP2Q13576 1575 aa29.31■■■□□ 2.28
RAB5A-201ENST00000273047 PTPRKQ15262 1439 aa29.3■■■□□ 2.28
RAB5A-201ENST00000273047 MAGI3Q5TCQ9 1506 aa29.3■■■□□ 2.28
RAB5A-201ENST00000273047 IFT140Q96RY7 1462 aa29.25■■■□□ 2.27
RAB5A-201ENST00000273047 WDR62O43379 1518 aa29.25■■■□□ 2.27
RAB5A-201ENST00000273047 ERCC6Q03468 1493 aa29.25■■■□□ 2.27
RAB5A-201ENST00000273047 MYOM3Q5VTT5 1437 aa29.21■■■□□ 2.27
RAB5A-201ENST00000273047 CDK13Q14004 1512 aaKnown RBP29.21■■■□□ 2.27
RAB5A-201ENST00000273047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.21■■■□□ 2.27
RAB5A-201ENST00000273047 SUPT6HQ7KZ85 1726 aaKnown RBP29.19■■■□□ 2.26
RAB5A-201ENST00000273047 CHIC2Q9UKJ5 165 aa29.18■■■□□ 2.26
RAB5A-201ENST00000273047 EHBP1L1Q8N3D4 1523 aa29.16■■■□□ 2.26
RAB5A-201ENST00000273047 THOC2Q8NI27 1593 aaKnown RBP29.16■■■□□ 2.26
RAB5A-201ENST00000273047 FBLN2P98095 1184 aa29.16■■■□□ 2.26
RAB5A-201ENST00000273047 EIF4G3O43432 1585 aaKnown RBP29.15■■■□□ 2.26
RAB5A-201ENST00000273047 EPRSP07814 1512 aaKnown RBP29.15■■■□□ 2.26
RAB5A-201ENST00000273047 UGGT2Q9NYU1 1516 aa29.12■■■□□ 2.25
RAB5A-201ENST00000273047 HECW1Q76N89 1606 aa29.12■■■□□ 2.25
RAB5A-201ENST00000273047 RRP7BPQ9NSQ0 103 aa29.12■■■□□ 2.25
RAB5A-201ENST00000273047 CCDC18Q5T9S5 1454 aa29.11■■■□□ 2.25
RAB5A-201ENST00000273047 PTPN23Q9H3S7 1636 aa29.1■■■□□ 2.25
RAB5A-201ENST00000273047 HIRIP3Q9BW71 556 aaPredicted RBP29.09■■■□□ 2.25
RAB5A-201ENST00000273047 GRIN2AQ12879 1464 aa29.07■■■□□ 2.24
RAB5A-201ENST00000273047 HFM1A2PYH4 1435 aa29.06■■■□□ 2.24
RAB5A-201ENST00000273047 DISP1Q96F81 1524 aa29.06■■■□□ 2.24
RAB5A-201ENST00000273047 NAIPQ13075 1403 aa29.06■■■□□ 2.24
RAB5A-201ENST00000273047 CHMP7Q8WUX9 453 aaPredicted RBP29.05■■■□□ 2.24
RAB5A-201ENST00000273047 ARHGEF11O15085 1522 aa29.05■■■□□ 2.24
RAB5A-201ENST00000273047 KIAA0586Q9BVV6 1533 aa29.05■■■□□ 2.24
RAB5A-201ENST00000273047 KIAA0556O60303 1618 aa29■■■□□ 2.23
RAB5A-201ENST00000273047 UACAQ9BZF9 1416 aa28.95■■■□□ 2.23
RAB5A-201ENST00000273047 PPP1R15AO75807 674 aaPredicted RBP28.94■■■□□ 2.22
RAB5A-201ENST00000273047 ZNF644Q9H582 1327 aaPredicted RBP28.93■■■□□ 2.22
RAB5A-201ENST00000273047 NUP153P49790 1475 aaKnown RBP28.93■■■□□ 2.22
RAB5A-201ENST00000273047 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
RAB5A-201ENST00000273047 TRIM52Q96A61 297 aa28.9■■■□□ 2.22
RAB5A-201ENST00000273047 DDX10Q13206 875 aaKnown RBP28.9■■■□□ 2.22
RAB5A-201ENST00000273047 KDM6BO15054 1643 aa28.89■■■□□ 2.22
RAB5A-201ENST00000273047 TCOF1Q13428 1488 aaKnown RBP28.89■■■□□ 2.21
RAB5A-201ENST00000273047 KCNH8Q96L42 1107 aa28.88■■■□□ 2.21
RAB5A-201ENST00000273047 TONSLQ96HA7 1378 aa28.88■■■□□ 2.21
RAB5A-201ENST00000273047 MAGI1Q96QZ7 1491 aaPredicted RBP28.87■■■□□ 2.21
RAB5A-201ENST00000273047 SYNJ2O15056 1496 aa28.86■■■□□ 2.21
RAB5A-201ENST00000273047 PLB1Q6P1J6 1458 aa28.86■■■□□ 2.21
RAB5A-201ENST00000273047 RAPGEF6Q8TEU7 1601 aa28.85■■■□□ 2.21
RAB5A-201ENST00000273047 FOXD1Q16676 465 aa28.83■■■□□ 2.21
RAB5A-201ENST00000273047 JPH4Q96JJ6 628 aa28.83■■■□□ 2.21
RAB5A-201ENST00000273047 TIMELESSQ9UNS1 1208 aa28.83■■■□□ 2.21
RAB5A-201ENST00000273047 PRG4Q92954 1404 aaPredicted RBP28.82■■■□□ 2.2
RAB5A-201ENST00000273047 MIA2Q96PC5 1412 aa28.8■■■□□ 2.2
RAB5A-201ENST00000273047 DENND4BO75064 1496 aaPredicted RBP28.77■■■□□ 2.2
RAB5A-201ENST00000273047 CDK11AQ9UQ88 783 aaPredicted RBP28.74■■■□□ 2.19
RAB5A-201ENST00000273047 ZNF777Q9ULD5 760 aaPredicted RBP28.74■■■□□ 2.19
RAB5A-201ENST00000273047 GCC2Q8IWJ2 1684 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms