RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
TNFRSF11A-201ENST00000269485 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
TNFRSF11A-201ENST00000269485 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
TNFRSF11A-201ENST00000269485 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
TNFRSF11A-201ENST00000269485 KIF21BO75037 1637 aa20.46■□□□□ 0.87
TNFRSF11A-201ENST00000269485 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
TNFRSF11A-201ENST00000269485 MYT1LQ9UL68 1186 aa20.45■□□□□ 0.86
TNFRSF11A-201ENST00000269485 RRP7BPQ9NSQ0 103 aa20.45■□□□□ 0.86
TNFRSF11A-201ENST00000269485 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.86
TNFRSF11A-201ENST00000269485 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF11A-201ENST00000269485 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
TNFRSF11A-201ENST00000269485 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
TNFRSF11A-201ENST00000269485 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF11A-201ENST00000269485 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF11A-201ENST00000269485 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF11A-201ENST00000269485 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
TNFRSF11A-201ENST00000269485 MIER1Q8N108 512 aa20.38■□□□□ 0.85
TNFRSF11A-201ENST00000269485 PRKCSHP14314 528 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF11A-201ENST00000269485 ARHGAP35Q9NRY4 1499 aa20.33■□□□□ 0.85
TNFRSF11A-201ENST00000269485 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.84
TNFRSF11A-201ENST00000269485 BCANQ96GW7 911 aa20.31■□□□□ 0.84
TNFRSF11A-201ENST00000269485 FOXD1Q16676 465 aa20.3■□□□□ 0.84
TNFRSF11A-201ENST00000269485 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
TNFRSF11A-201ENST00000269485 ANP32EQ9BTT0 268 aa20.28■□□□□ 0.84
TNFRSF11A-201ENST00000269485 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
TNFRSF11A-201ENST00000269485 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.83
TNFRSF11A-201ENST00000269485 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
TNFRSF11A-201ENST00000269485 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
TNFRSF11A-201ENST00000269485 KCNH8Q96L42 1107 aa20.22■□□□□ 0.83
TNFRSF11A-201ENST00000269485 PHLDB1Q86UU1 1377 aa20.16■□□□□ 0.82
TNFRSF11A-201ENST00000269485 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF11A-201ENST00000269485 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
TNFRSF11A-201ENST00000269485 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
TNFRSF11A-201ENST00000269485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.81
TNFRSF11A-201ENST00000269485 RAB3GAP2Q9H2M9 1393 aa20.09■□□□□ 0.81
TNFRSF11A-201ENST00000269485 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
TNFRSF11A-201ENST00000269485 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
TNFRSF11A-201ENST00000269485 ABCA10Q8WWZ4 1543 aa20.06■□□□□ 0.8
TNFRSF11A-201ENST00000269485 KDM2AQ9Y2K7 1162 aa20.05■□□□□ 0.8
TNFRSF11A-201ENST00000269485 ZNF644Q9H582 1327 aaPredicted RBP20.03■□□□□ 0.8
TNFRSF11A-201ENST00000269485 KIF21AQ7Z4S6 1674 aa20.02■□□□□ 0.8
TNFRSF11A-201ENST00000269485 LAMC3Q9Y6N6 1575 aa20.02■□□□□ 0.8
TNFRSF11A-201ENST00000269485 DHX57Q6P158 1386 aaKnown RBP20.01■□□□□ 0.79
TNFRSF11A-201ENST00000269485 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
TNFRSF11A-201ENST00000269485 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
TNFRSF11A-201ENST00000269485 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
TNFRSF11A-201ENST00000269485 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
TNFRSF11A-201ENST00000269485 SUPT16HQ9Y5B9 1047 aaKnown RBP19.94■□□□□ 0.78
TNFRSF11A-201ENST00000269485 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
TNFRSF11A-201ENST00000269485 FMN1Q68DA7 1419 aa19.93■□□□□ 0.78
TNFRSF11A-201ENST00000269485 RGL3Q3MIN7 710 aa19.93■□□□□ 0.78
TNFRSF11A-201ENST00000269485 CDK11AQ9UQ88 783 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF11A-201ENST00000269485 CFDP1Q9UEE9 299 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF11A-201ENST00000269485 PCF11O94913 1555 aaKnown RBP19.91■□□□□ 0.78
TNFRSF11A-201ENST00000269485 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
TNFRSF11A-201ENST00000269485 TONSLQ96HA7 1378 aa19.89■□□□□ 0.77
TNFRSF11A-201ENST00000269485 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
TNFRSF11A-201ENST00000269485 SETD5Q9C0A6 1442 aa19.88■□□□□ 0.77
TNFRSF11A-201ENST00000269485 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
TNFRSF11A-201ENST00000269485 PLEKHD1A6NEE1 506 aa19.86■□□□□ 0.77
TNFRSF11A-201ENST00000269485 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
TNFRSF11A-201ENST00000269485 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
TNFRSF11A-201ENST00000269485 CDK13Q14004 1512 aaKnown RBP19.83■□□□□ 0.77
TNFRSF11A-201ENST00000269485 TIAM1Q13009 1591 aa19.83■□□□□ 0.77
TNFRSF11A-201ENST00000269485 RRBP1Q9P2E9 1410 aaKnown RBP19.8■□□□□ 0.76
TNFRSF11A-201ENST00000269485 CASKIN1Q8WXD9 1431 aa19.79■□□□□ 0.76
TNFRSF11A-201ENST00000269485 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
TNFRSF11A-201ENST00000269485 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.76
TNFRSF11A-201ENST00000269485 FAM9BQ8IZU0 186 aa19.78■□□□□ 0.76
TNFRSF11A-201ENST00000269485 FGD6Q6ZV73 1430 aa19.75■□□□□ 0.75
TNFRSF11A-201ENST00000269485 NCOA2Q15596 1464 aa19.75■□□□□ 0.75
TNFRSF11A-201ENST00000269485 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
TNFRSF11A-201ENST00000269485 ANP32CO43423 234 aa19.74■□□□□ 0.75
TNFRSF11A-201ENST00000269485 ANO8Q9HCE9 1232 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF11A-201ENST00000269485 CCDC136Q96JN2 1154 aa19.73■□□□□ 0.75
TNFRSF11A-201ENST00000269485 IFT140Q96RY7 1462 aa19.72■□□□□ 0.75
TNFRSF11A-201ENST00000269485 PRG4Q92954 1404 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF11A-201ENST00000269485 PLB1Q6P1J6 1458 aa19.71■□□□□ 0.75
TNFRSF11A-201ENST00000269485 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
TNFRSF11A-201ENST00000269485 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
TNFRSF11A-201ENST00000269485 FKBP8Q14318 412 aa19.69■□□□□ 0.74
TNFRSF11A-201ENST00000269485 FYCO1Q9BQS8 1478 aa19.68■□□□□ 0.74
TNFRSF11A-201ENST00000269485 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
TNFRSF11A-201ENST00000269485 MPHOSPH9Q99550 1183 aa19.66■□□□□ 0.74
TNFRSF11A-201ENST00000269485 CUL7Q14999 1698 aa19.65■□□□□ 0.74
TNFRSF11A-201ENST00000269485 HNRNPUQ00839 825 aaKnown RBP eCLIP19.64■□□□□ 0.73
TNFRSF11A-201ENST00000269485 MYOM3Q5VTT5 1437 aa19.63■□□□□ 0.73
TNFRSF11A-201ENST00000269485 IQGAP2Q13576 1575 aa19.63■□□□□ 0.73
TNFRSF11A-201ENST00000269485 CARMIL2Q6F5E8 1435 aa19.62■□□□□ 0.73
TNFRSF11A-201ENST00000269485 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
TNFRSF11A-201ENST00000269485 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
TNFRSF11A-201ENST00000269485 NEFLP07196 543 aa19.62■□□□□ 0.73
TNFRSF11A-201ENST00000269485 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
TNFRSF11A-201ENST00000269485 RTN4Q9NQC3 1192 aaKnown RBP19.6■□□□□ 0.73
TNFRSF11A-201ENST00000269485 CCDC18Q5T9S5 1454 aa19.6■□□□□ 0.73
TNFRSF11A-201ENST00000269485 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
TNFRSF11A-201ENST00000269485 PTPRGP23470 1445 aa19.59■□□□□ 0.73
TNFRSF11A-201ENST00000269485 PPP1R15AO75807 674 aaPredicted RBP19.59■□□□□ 0.73
TNFRSF11A-201ENST00000269485 EFCAB5A4FU69 1503 aa19.59■□□□□ 0.73
TNFRSF11A-201ENST00000269485 L3MBTL2Q969R5 705 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms