RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 MAPKBP1O60336 1514 aa32.03■■■□□ 2.72
CDR2-201ENST00000268383 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
CDR2-201ENST00000268383 LRRC9Q6ZRR7 1453 aa31.98■■■□□ 2.71
CDR2-201ENST00000268383 SUPT16HQ9Y5B9 1047 aaKnown RBP31.95■■■□□ 2.7
CDR2-201ENST00000268383 SETD5Q9C0A6 1442 aa31.94■■■□□ 2.7
CDR2-201ENST00000268383 FHOD3Q2V2M9 1422 aa31.88■■■□□ 2.69
CDR2-201ENST00000268383 RAD54L2Q9Y4B4 1467 aa31.88■■■□□ 2.69
CDR2-201ENST00000268383 HIRIP3Q9BW71 556 aaPredicted RBP31.88■■■□□ 2.69
CDR2-201ENST00000268383 PCF11O94913 1555 aaKnown RBP31.87■■■□□ 2.69
CDR2-201ENST00000268383 DDX10Q13206 875 aaKnown RBP31.84■■■□□ 2.69
CDR2-201ENST00000268383 MAP3K1Q13233 1512 aa31.84■■■□□ 2.69
CDR2-201ENST00000268383 WDR97A6NE52 1622 aa31.84■■■□□ 2.69
CDR2-201ENST00000268383 FANCD2Q9BXW9 1451 aa31.8■■■□□ 2.68
CDR2-201ENST00000268383 FHAD1B1AJZ9 1412 aa31.79■■■□□ 2.68
CDR2-201ENST00000268383 CC2D2AQ9P2K1 1620 aa31.73■■■□□ 2.67
CDR2-201ENST00000268383 CFAP43Q8NDM7 1665 aa31.72■■■□□ 2.67
CDR2-201ENST00000268383 NESP48681 1621 aa31.7■■■□□ 2.66
CDR2-201ENST00000268383 POLA1P09884 1462 aaPredicted RBP31.66■■■□□ 2.66
CDR2-201ENST00000268383 BCANQ96GW7 911 aa31.62■■■□□ 2.65
CDR2-201ENST00000268383 TOPBP1Q92547 1522 aa31.6■■■□□ 2.65
CDR2-201ENST00000268383 ABCA10Q8WWZ4 1543 aa31.58■■■□□ 2.65
CDR2-201ENST00000268383 DNMBPQ6XZF7 1577 aa31.57■■■□□ 2.65
CDR2-201ENST00000268383 FYCO1Q9BQS8 1478 aa31.57■■■□□ 2.64
CDR2-201ENST00000268383 CASKIN1Q8WXD9 1431 aa31.57■■■□□ 2.64
CDR2-201ENST00000268383 PPP1R15AO75807 674 aaPredicted RBP31.56■■■□□ 2.64
CDR2-201ENST00000268383 MYT1Q01538 1121 aa31.56■■■□□ 2.64
CDR2-201ENST00000268383 TDRD9Q8NDG6 1382 aaKnown RBP31.49■■■□□ 2.63
CDR2-201ENST00000268383 PTPRKQ15262 1439 aa31.48■■■□□ 2.63
CDR2-201ENST00000268383 FGD6Q6ZV73 1430 aa31.48■■■□□ 2.63
CDR2-201ENST00000268383 TSHZ2Q9NRE2 1034 aa31.48■■■□□ 2.63
CDR2-201ENST00000268383 MTUS2Q5JR59 1369 aa31.47■■■□□ 2.63
CDR2-201ENST00000268383 EFCAB5A4FU69 1503 aa31.46■■■□□ 2.63
CDR2-201ENST00000268383 TRIM52Q96A61 297 aa31.46■■■□□ 2.63
CDR2-201ENST00000268383 CTTNBP2Q8WZ74 1663 aa31.45■■■□□ 2.62
CDR2-201ENST00000268383 FKBP8Q14318 412 aa31.43■■■□□ 2.62
CDR2-201ENST00000268383 SNAPC4Q5SXM2 1469 aa31.41■■■□□ 2.62
CDR2-201ENST00000268383 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.624e-10■■■□□ 17.2
CDR2-201ENST00000268383 CCDC18Q5T9S5 1454 aa31.4■■■□□ 2.62
CDR2-201ENST00000268383 TIMELESSQ9UNS1 1208 aa31.4■■■□□ 2.62
CDR2-201ENST00000268383 TONSLQ96HA7 1378 aa31.39■■■□□ 2.62
CDR2-201ENST00000268383 FMN1Q68DA7 1419 aa31.39■■■□□ 2.62
CDR2-201ENST00000268383 CUL7Q14999 1698 aa31.39■■■□□ 2.62
CDR2-201ENST00000268383 URB2Q14146 1524 aaKnown RBP31.36■■■□□ 2.61
CDR2-201ENST00000268383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.36■■■□□ 2.61
CDR2-201ENST00000268383 LRRIQ1Q96JM4 1722 aa31.35■■■□□ 2.61
CDR2-201ENST00000268383 ANP32CO43423 234 aa31.34■■■□□ 2.61
CDR2-201ENST00000268383 DNAJC5BQ9UF47 199 aa31.33■■■□□ 2.61
CDR2-201ENST00000268383 CHIC2Q9UKJ5 165 aa31.31■■■□□ 2.6
CDR2-201ENST00000268383 NCOA2Q15596 1464 aa31.29■■■□□ 2.6
CDR2-201ENST00000268383 RRP7BPQ9NSQ0 103 aa31.28■■■□□ 2.6
CDR2-201ENST00000268383 HFM1A2PYH4 1435 aa31.27■■■□□ 2.6
CDR2-201ENST00000268383 PTPN23Q9H3S7 1636 aa31.27■■■□□ 2.6
CDR2-201ENST00000268383 ARID3CA6NKF2 412 aa31.26■■■□□ 2.59
CDR2-201ENST00000268383 NAIPQ13075 1403 aa31.25■■■□□ 2.59
CDR2-201ENST00000268383 UACAQ9BZF9 1416 aa31.25■■■□□ 2.59
CDR2-201ENST00000268383 GAPVD1Q14C86 1478 aa31.22■■■□□ 2.59
CDR2-201ENST00000268383 MYOM3Q5VTT5 1437 aa31.22■■■□□ 2.59
CDR2-201ENST00000268383 CCER2I3L3R5 266 aa31.2■■■□□ 2.58
CDR2-201ENST00000268383 SAMD9Q5K651 1589 aa31.2■■■□□ 2.58
CDR2-201ENST00000268383 GRIN2BQ13224 1484 aa31.2■■■□□ 2.58
CDR2-201ENST00000268383 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
CDR2-201ENST00000268383 MAGI3Q5TCQ9 1506 aa31.15■■■□□ 2.58
CDR2-201ENST00000268383 SUPT6HQ7KZ85 1726 aaKnown RBP31.1■■■□□ 2.57
CDR2-201ENST00000268383 NEFLP07196 543 aa31.1■■■□□ 2.57
CDR2-201ENST00000268383 FOXD1Q16676 465 aa31.08■■■□□ 2.57
CDR2-201ENST00000268383 KDM5BQ9UGL1 1544 aa31.08■■■□□ 2.57
CDR2-201ENST00000268383 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
CDR2-201ENST00000268383 EHBP1L1Q8N3D4 1523 aa31.04■■■□□ 2.56
CDR2-201ENST00000268383 UGGT2Q9NYU1 1516 aa31.03■■■□□ 2.56
CDR2-201ENST00000268383 HSPA5P11021 654 aaKnown RBP31.03■■■□□ 2.56
CDR2-201ENST00000268383 KDM6BO15054 1643 aa31.01■■■□□ 2.56
CDR2-201ENST00000268383 DENND4BO75064 1496 aaPredicted RBP31■■■□□ 2.55
CDR2-201ENST00000268383 WASHC2AQ641Q2 1341 aa30.99■■■□□ 2.55
CDR2-201ENST00000268383 HNRNPUQ00839 825 aaKnown RBP eCLIP30.99■■■□□ 2.55
CDR2-201ENST00000268383 IRX6P78412 446 aaPredicted RBP30.97■■■□□ 2.55
CDR2-201ENST00000268383 KIF21AQ7Z4S6 1674 aa30.97■■■□□ 2.55
CDR2-201ENST00000268383 CDK13Q14004 1512 aaKnown RBP30.96■■■□□ 2.55
CDR2-201ENST00000268383 PDS5BQ9NTI5 1447 aa30.95■■■□□ 2.55
CDR2-201ENST00000268383 ARHGEF11O15085 1522 aa30.94■■■□□ 2.54
CDR2-201ENST00000268383 THOC2Q8NI27 1593 aaKnown RBP30.93■■■□□ 2.54
CDR2-201ENST00000268383 MPHOSPH9Q99550 1183 aa30.91■■■□□ 2.54
CDR2-201ENST00000268383 CCDC184Q52MB2 194 aa30.9■■■□□ 2.54
CDR2-201ENST00000268383 L3MBTL2Q969R5 705 aa30.89■■■□□ 2.54
CDR2-201ENST00000268383 EPRSP07814 1512 aaKnown RBP30.88■■■□□ 2.53
CDR2-201ENST00000268383 TARBP1Q13395 1621 aaKnown RBP30.87■■■□□ 2.53
CDR2-201ENST00000268383 C11orf95C9JLR9 678 aaPredicted RBP30.87■■■□□ 2.53
CDR2-201ENST00000268383 ANP32EQ9BTT0 268 aa30.86■■■□□ 2.53
CDR2-201ENST00000268383 RBM19Q9Y4C8 960 aaKnown RBP30.86■■■□□ 2.53
CDR2-201ENST00000268383 TCOF1Q13428 1488 aaKnown RBP30.84■■■□□ 2.53
CDR2-201ENST00000268383 EIF4G2P78344 907 aaKnown RBP eCLIP30.84■■■□□ 2.53
CDR2-201ENST00000268383 HECW1Q76N89 1606 aa30.82■■■□□ 2.52
CDR2-201ENST00000268383 ZNF644Q9H582 1327 aaPredicted RBP30.82■■■□□ 2.52
CDR2-201ENST00000268383 GCC2Q8IWJ2 1684 aa30.81■■■□□ 2.52
CDR2-201ENST00000268383 IQGAP2Q13576 1575 aa30.79■■■□□ 2.52
CDR2-201ENST00000268383 PBRM1Q86U86 1689 aa30.77■■■□□ 2.52
CDR2-201ENST00000268383 NBPF8Q3BBV2 869 aa30.76■■■□□ 2.51
CDR2-201ENST00000268383 FAM9BQ8IZU0 186 aa30.72■■■□□ 2.51
CDR2-201ENST00000268383 CNGB1Q14028 1251 aaPredicted RBP30.71■■■□□ 2.51
CDR2-201ENST00000268383 WDR62O43379 1518 aa30.7■■■□□ 2.51
CDR2-201ENST00000268383 MIA2Q96PC5 1412 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms