RNA–Protein interactions for RNA: ENST00000265997.4

CPEB3-201, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPEB3, Length 4,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-201ENST00000265997 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
CPEB3-201ENST00000265997 MRS2Q9HD23 443 aa20.44■□□□□ 0.86
CPEB3-201ENST00000265997 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
CPEB3-201ENST00000265997 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
CPEB3-201ENST00000265997 CUX2O14529 1486 aa20.4■□□□□ 0.86
CPEB3-201ENST00000265997 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
CPEB3-201ENST00000265997 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
CPEB3-201ENST00000265997 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
CPEB3-201ENST00000265997 CCNB3Q8WWL7 1395 aa20.38■□□□□ 0.85
CPEB3-201ENST00000265997 CFDP1Q9UEE9 299 aaPredicted RBP20.37■□□□□ 0.85
CPEB3-201ENST00000265997 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
CPEB3-201ENST00000265997 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.33■□□□□ 0.85
CPEB3-201ENST00000265997 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
CPEB3-201ENST00000265997 WDR43Q15061 677 aaKnown RBP eCLIP20.33■□□□□ 0.84
CPEB3-201ENST00000265997 HIRIP3Q9BW71 556 aaPredicted RBP20.33■□□□□ 0.84
CPEB3-201ENST00000265997 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
CPEB3-201ENST00000265997 CCDC136Q96JN2 1154 aa20.3■□□□□ 0.84
CPEB3-201ENST00000265997 WIZO95785 1651 aa20.29■□□□□ 0.84
CPEB3-201ENST00000265997 TIMELESSQ9UNS1 1208 aa20.28■□□□□ 0.84
CPEB3-201ENST00000265997 NPM2Q86SE8 214 aaKnown RBP20.27■□□□□ 0.84
CPEB3-201ENST00000265997 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
CPEB3-201ENST00000265997 KCNH8Q96L42 1107 aa20.24■□□□□ 0.83
CPEB3-201ENST00000265997 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
CPEB3-201ENST00000265997 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
CPEB3-201ENST00000265997 BCL11AQ9H165 835 aa20.19■□□□□ 0.82
CPEB3-201ENST00000265997 CDCA8Q53HL2 280 aa20.19■□□□□ 0.82
CPEB3-201ENST00000265997 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
CPEB3-201ENST00000265997 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
CPEB3-201ENST00000265997 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
CPEB3-201ENST00000265997 SETD5Q9C0A6 1442 aa20.16■□□□□ 0.82
CPEB3-201ENST00000265997 PDS5BQ9NTI5 1447 aa20.15■□□□□ 0.82
CPEB3-201ENST00000265997 CARD11Q9BXL7 1154 aa20.14■□□□□ 0.81
CPEB3-201ENST00000265997 SMARCA4P51532 1647 aa20.13■□□□□ 0.81
CPEB3-201ENST00000265997 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
CPEB3-201ENST00000265997 FMN1Q68DA7 1419 aa20.12■□□□□ 0.81
CPEB3-201ENST00000265997 ATAD2BQ9ULI0 1458 aa20.1■□□□□ 0.81
CPEB3-201ENST00000265997 KANK4Q5T7N3 995 aaPredicted RBP20.08■□□□□ 0.8
CPEB3-201ENST00000265997 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
CPEB3-201ENST00000265997 IRX6P78412 446 aaPredicted RBP20.06■□□□□ 0.8
CPEB3-201ENST00000265997 KNSTRNQ9Y448 316 aa20.05■□□□□ 0.8
CPEB3-201ENST00000265997 HSP90AA1P07900 732 aaKnown RBP20.05■□□□□ 0.8
CPEB3-201ENST00000265997 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
CPEB3-201ENST00000265997 CARMIL2Q6F5E8 1435 aa20■□□□□ 0.79
CPEB3-201ENST00000265997 CFAP53Q96M91 514 aa20■□□□□ 0.79
CPEB3-201ENST00000265997 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
CPEB3-201ENST00000265997 CCER2I3L3R5 266 aa19.98■□□□□ 0.79
CPEB3-201ENST00000265997 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
CPEB3-201ENST00000265997 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
CPEB3-201ENST00000265997 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
CPEB3-201ENST00000265997 ANP32BQ92688 251 aaKnown RBP19.95■□□□□ 0.78
CPEB3-201ENST00000265997 SUPT16HQ9Y5B9 1047 aaKnown RBP19.94■□□□□ 0.78
CPEB3-201ENST00000265997 MYH16Q9H6N6 1097 aa19.92■□□□□ 0.78
CPEB3-201ENST00000265997 KANK1Q14678 1352 aa19.9■□□□□ 0.78
CPEB3-201ENST00000265997 DCAF11Q8TEB1 546 aa19.89■□□□□ 0.77
CPEB3-201ENST00000265997 PPP4R2Q9NY27 417 aa19.88■□□□□ 0.77
CPEB3-201ENST00000265997 TMF1P82094 1093 aa19.88■□□□□ 0.77
CPEB3-201ENST00000265997 DDRGK1Q96HY6 314 aa19.88■□□□□ 0.77
CPEB3-201ENST00000265997 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
CPEB3-201ENST00000265997 HSPA5P11021 654 aaKnown RBP19.85■□□□□ 0.77
CPEB3-201ENST00000265997 PKD2Q13563 968 aa19.83■□□□□ 0.76
CPEB3-201ENST00000265997 ANKRD30AQ9BXX3 1397 aa19.83■□□□□ 0.76
CPEB3-201ENST00000265997 MPHOSPH9Q99550 1183 aa19.82■□□□□ 0.76
CPEB3-201ENST00000265997 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
CPEB3-201ENST00000265997 NBR1Q14596 966 aa19.81■□□□□ 0.76
CPEB3-201ENST00000265997 NUDCQ9Y266 331 aa19.81■□□□□ 0.76
CPEB3-201ENST00000265997 BECN1Q14457 450 aa19.8■□□□□ 0.76
CPEB3-201ENST00000265997 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
CPEB3-201ENST00000265997 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
CPEB3-201ENST00000265997 MAPK8IP3Q9UPT6 1336 aa19.77■□□□□ 0.76
CPEB3-201ENST00000265997 POGKQ9P215 609 aa19.76■□□□□ 0.75
CPEB3-201ENST00000265997 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
CPEB3-201ENST00000265997 NUP155O75694 1391 aa19.74■□□□□ 0.75
CPEB3-201ENST00000265997 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
CPEB3-201ENST00000265997 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
CPEB3-201ENST00000265997 EFCAB2Q5VUJ9 269 aa19.73■□□□□ 0.75
CPEB3-201ENST00000265997 RSPH4AQ5TD94 716 aa19.73■□□□□ 0.75
CPEB3-201ENST00000265997 FTSJ3Q8IY81 847 aaKnown RBP19.72■□□□□ 0.75
CPEB3-201ENST00000265997 EIF5BO60841 1220 aaKnown RBP19.71■□□□□ 0.75
CPEB3-201ENST00000265997 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
CPEB3-201ENST00000265997 SENP3-EIF4A1A0A087X0R7 540 aa19.7■□□□□ 0.74
CPEB3-201ENST00000265997 FOXD1Q16676 465 aa19.7■□□□□ 0.74
CPEB3-201ENST00000265997 PNNQ9H307 717 aaKnown RBP19.7■□□□□ 0.74
CPEB3-201ENST00000265997 MS4A1P11836 297 aa19.69■□□□□ 0.74
CPEB3-201ENST00000265997 KTN1Q86UP2 1357 aaKnown RBP19.69■□□□□ 0.74
CPEB3-201ENST00000265997 C14orf37Q86TY3 774 aa19.69■□□□□ 0.74
CPEB3-201ENST00000265997 PPM1GO15355 546 aaPredicted RBP19.68■□□□□ 0.74
CPEB3-201ENST00000265997 ERICH6BQ5W0A0 696 aa19.68■□□□□ 0.74
CPEB3-201ENST00000265997 CHMP4BQ9H444 224 aaKnown RBP19.68■□□□□ 0.74
CPEB3-201ENST00000265997 NEUROD2Q15784 382 aa19.67■□□□□ 0.74
CPEB3-201ENST00000265997 ANP32EQ9BTT0 268 aa19.67■□□□□ 0.74
CPEB3-201ENST00000265997 ROCK2O75116 1388 aaKnown RBP19.66■□□□□ 0.74
CPEB3-201ENST00000265997 RALBP1Q15311 655 aa19.66■□□□□ 0.74
CPEB3-201ENST00000265997 NCAPD3P42695 1498 aa19.65■□□□□ 0.74
CPEB3-201ENST00000265997 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
CPEB3-201ENST00000265997 L3MBTL2Q969R5 705 aa19.63■□□□□ 0.73
CPEB3-201ENST00000265997 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
CPEB3-201ENST00000265997 IGF1RP08069 1367 aa19.62■□□□□ 0.73
CPEB3-201ENST00000265997 JPH4Q96JJ6 628 aa19.61■□□□□ 0.73
CPEB3-201ENST00000265997 TNNT2P45379 298 aaPredicted RBP19.6■□□□□ 0.73
CPEB3-201ENST00000265997 ZBTB7CA1YPR0 619 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms