RNA–Protein interactions for RNA: ENST00000265997.4

CPEB3-201, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPEB3, Length 4,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-201ENST00000265997 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
CPEB3-201ENST00000265997 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
CPEB3-201ENST00000265997 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
CPEB3-201ENST00000265997 SHROOM4Q9ULL8 1493 aa24.93■■□□□ 1.58
CPEB3-201ENST00000265997 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
CPEB3-201ENST00000265997 APLP2Q06481 763 aa23.73■■□□□ 1.39
CPEB3-201ENST00000265997 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
CPEB3-201ENST00000265997 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
CPEB3-201ENST00000265997 PCGF6Q9BYE7 350 aa23.48■■□□□ 1.35
CPEB3-201ENST00000265997 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
CPEB3-201ENST00000265997 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
CPEB3-201ENST00000265997 TTBK1Q5TCY1 1321 aaPredicted RBP23.15■■□□□ 1.3
CPEB3-201ENST00000265997 UBTFP17480 764 aaKnown RBP23.05■■□□□ 1.28
CPEB3-201ENST00000265997 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
CPEB3-201ENST00000265997 RANGAP1P46060 587 aaPredicted RBP22.96■■□□□ 1.27
CPEB3-201ENST00000265997 CENPBP07199 599 aaPredicted RBP22.85■■□□□ 1.25
CPEB3-201ENST00000265997 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
CPEB3-201ENST00000265997 TRIM26Q12899 539 aaPredicted RBP22.79■■□□□ 1.24
CPEB3-201ENST00000265997 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
CPEB3-201ENST00000265997 LOC105371045A0A1W2PR82 267 aa22.54■■□□□ 1.2
CPEB3-201ENST00000265997 HRCP23327 699 aa22.54■■□□□ 1.2
CPEB3-201ENST00000265997 PPARGC1BQ86YN6 1023 aaKnown RBP22.51■■□□□ 1.19
CPEB3-201ENST00000265997 ABCC9O60706 1549 aa22.45■■□□□ 1.18
CPEB3-201ENST00000265997 NEFLP07196 543 aa22.22■■□□□ 1.15
CPEB3-201ENST00000265997 YTHDC1Q96MU7 727 aaKnown RBP22.19■■□□□ 1.14
CPEB3-201ENST00000265997 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
CPEB3-201ENST00000265997 ERICH6Q7L0X2 663 aa22.13■■□□□ 1.13
CPEB3-201ENST00000265997 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
CPEB3-201ENST00000265997 HNRNPUL2Q1KMD3 747 aaKnown RBP22.12■■□□□ 1.13
CPEB3-201ENST00000265997 ITGAEP38570 1179 aa22.11■■□□□ 1.13
CPEB3-201ENST00000265997 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
CPEB3-201ENST00000265997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
CPEB3-201ENST00000265997 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
CPEB3-201ENST00000265997 DIEXFQ68CQ4 756 aaKnown RBP21.77■■□□□ 1.08
CPEB3-201ENST00000265997 MYT1Q01538 1121 aa21.77■■□□□ 1.08
CPEB3-201ENST00000265997 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
CPEB3-201ENST00000265997 FAM50AQ14320 339 aaKnown RBP21.73■■□□□ 1.07
CPEB3-201ENST00000265997 MYT1LQ9UL68 1186 aa21.73■■□□□ 1.07
CPEB3-201ENST00000265997 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
CPEB3-201ENST00000265997 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
CPEB3-201ENST00000265997 TRIM52Q96A61 297 aa21.51■■□□□ 1.03
CPEB3-201ENST00000265997 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
CPEB3-201ENST00000265997 ZNF316A6NFI3 1004 aaPredicted RBP21.42■■□□□ 1.02
CPEB3-201ENST00000265997 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
CPEB3-201ENST00000265997 CNGB1Q14028 1251 aaPredicted RBP21.35■■□□□ 1.01
CPEB3-201ENST00000265997 DAXXQ9UER7 740 aaPredicted RBP21.34■■□□□ 1.01
CPEB3-201ENST00000265997 NACADO15069 1562 aa21.31■■□□□ 1
CPEB3-201ENST00000265997 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
CPEB3-201ENST00000265997 ANP32CO43423 234 aa21.3■■□□□ 1
CPEB3-201ENST00000265997 P3H3Q8IVL6 736 aa21.28■■□□□ 1
CPEB3-201ENST00000265997 FBLN2P98095 1184 aa21.27■■□□□ 1
CPEB3-201ENST00000265997 CDK11AQ9UQ88 783 aaPredicted RBP21.2■□□□□ 0.98
CPEB3-201ENST00000265997 EEA1Q15075 1411 aa21.18■□□□□ 0.98
CPEB3-201ENST00000265997 SLC4A1APQ9BWU0 796 aaKnown RBP21.18■□□□□ 0.98
CPEB3-201ENST00000265997 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
CPEB3-201ENST00000265997 ZNF326Q5BKZ1 582 aaKnown RBP21.13■□□□□ 0.97
CPEB3-201ENST00000265997 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
CPEB3-201ENST00000265997 ACIN1Q9UKV3 1341 aaKnown RBP21.06■□□□□ 0.96
CPEB3-201ENST00000265997 CLIP1P30622 1438 aa21.05■□□□□ 0.96
CPEB3-201ENST00000265997 ARID3CA6NKF2 412 aa21.03■□□□□ 0.96
CPEB3-201ENST00000265997 GOLGA3Q08378 1498 aa21.02■□□□□ 0.95
CPEB3-201ENST00000265997 TONSLQ96HA7 1378 aa21■□□□□ 0.95
CPEB3-201ENST00000265997 ZNF777Q9ULD5 760 aaPredicted RBP20.98■□□□□ 0.95
CPEB3-201ENST00000265997 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
CPEB3-201ENST00000265997 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
CPEB3-201ENST00000265997 CLSPNQ9HAW4 1339 aa20.97■□□□□ 0.95
CPEB3-201ENST00000265997 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
CPEB3-201ENST00000265997 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
CPEB3-201ENST00000265997 BCANQ96GW7 911 aa20.93■□□□□ 0.94
CPEB3-201ENST00000265997 RTL5Q5HYW3 569 aaPredicted RBP20.92■□□□□ 0.94
CPEB3-201ENST00000265997 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
CPEB3-201ENST00000265997 MTUS2Q5JR59 1369 aa20.85■□□□□ 0.93
CPEB3-201ENST00000265997 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
CPEB3-201ENST00000265997 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
CPEB3-201ENST00000265997 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
CPEB3-201ENST00000265997 DDX10Q13206 875 aaKnown RBP20.72■□□□□ 0.91
CPEB3-201ENST00000265997 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
CPEB3-201ENST00000265997 NEFMP07197 916 aa20.68■□□□□ 0.9
CPEB3-201ENST00000265997 TSPY4P0CV99 314 aa20.67■□□□□ 0.9
CPEB3-201ENST00000265997 TSPY10P0CW01 314 aa20.67■□□□□ 0.9
CPEB3-201ENST00000265997 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
CPEB3-201ENST00000265997 CANXP27824 592 aaKnown RBP20.66■□□□□ 0.9
CPEB3-201ENST00000265997 ZBTB47Q9UFB7 747 aaPredicted RBP20.64■□□□□ 0.89
CPEB3-201ENST00000265997 NPM1P06748 294 aaKnown RBP eCLIP20.62■□□□□ 0.89
CPEB3-201ENST00000265997 HNRNPUQ00839 825 aaKnown RBP eCLIP20.62■□□□□ 0.89
CPEB3-201ENST00000265997 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
CPEB3-201ENST00000265997 FKBP8Q14318 412 aa20.58■□□□□ 0.88
CPEB3-201ENST00000265997 ANP32AP39687 249 aaKnown RBP20.53■□□□□ 0.88
CPEB3-201ENST00000265997 FAM9BQ8IZU0 186 aa20.52■□□□□ 0.88
CPEB3-201ENST00000265997 MIER1Q8N108 512 aa20.52■□□□□ 0.88
CPEB3-201ENST00000265997 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
CPEB3-201ENST00000265997 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
CPEB3-201ENST00000265997 ESF1Q9H501 851 aaKnown RBP20.5■□□□□ 0.87
CPEB3-201ENST00000265997 CHGAP10645 457 aaKnown RBP20.49■□□□□ 0.87
CPEB3-201ENST00000265997 SOGA1O94964 1423 aa20.49■□□□□ 0.87
CPEB3-201ENST00000265997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
CPEB3-201ENST00000265997 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
CPEB3-201ENST00000265997 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
CPEB3-201ENST00000265997 TMC1Q8TDI8 760 aa20.48■□□□□ 0.87
CPEB3-201ENST00000265997 PLEKHD1A6NEE1 506 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms