RNA–Protein interactions for RNA: ENST00000265593.8

CLCN2-201, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCN2, Length 3,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-201ENST00000265593 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
CLCN2-201ENST00000265593 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
CLCN2-201ENST00000265593 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
CLCN2-201ENST00000265593 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
CLCN2-201ENST00000265593 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
CLCN2-201ENST00000265593 FHAD1B1AJZ9 1412 aa22.69■■□□□ 1.22
CLCN2-201ENST00000265593 ATP1B4Q9UN42 357 aaPredicted RBP22.69■■□□□ 1.22
CLCN2-201ENST00000265593 LRRC9Q6ZRR7 1453 aa22.68■■□□□ 1.22
CLCN2-201ENST00000265593 FHOD3Q2V2M9 1422 aa22.65■■□□□ 1.22
CLCN2-201ENST00000265593 PCF11O94913 1555 aaKnown RBP22.64■■□□□ 1.22
CLCN2-201ENST00000265593 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
CLCN2-201ENST00000265593 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
CLCN2-201ENST00000265593 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
CLCN2-201ENST00000265593 LAMC3Q9Y6N6 1575 aa22.6■■□□□ 1.21
CLCN2-201ENST00000265593 CUL7Q14999 1698 aa22.6■■□□□ 1.21
CLCN2-201ENST00000265593 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.21
CLCN2-201ENST00000265593 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.2
CLCN2-201ENST00000265593 BCANQ96GW7 911 aa22.58■■□□□ 1.2
CLCN2-201ENST00000265593 EFCAB5A4FU69 1503 aa22.55■■□□□ 1.2
CLCN2-201ENST00000265593 TDRD9Q8NDG6 1382 aaKnown RBP22.54■■□□□ 1.2
CLCN2-201ENST00000265593 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
CLCN2-201ENST00000265593 CTTNBP2Q8WZ74 1663 aa22.54■■□□□ 1.2
CLCN2-201ENST00000265593 FYCO1Q9BQS8 1478 aa22.52■■□□□ 1.2
CLCN2-201ENST00000265593 SETD5Q9C0A6 1442 aa22.52■■□□□ 1.2
CLCN2-201ENST00000265593 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
CLCN2-201ENST00000265593 CASKIN1Q8WXD9 1431 aa22.5■■□□□ 1.19
CLCN2-201ENST00000265593 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
CLCN2-201ENST00000265593 MAPKBP1O60336 1514 aa22.47■■□□□ 1.19
CLCN2-201ENST00000265593 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.191e-6■■■■■ 27.6
CLCN2-201ENST00000265593 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
CLCN2-201ENST00000265593 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
CLCN2-201ENST00000265593 FMN1Q68DA7 1419 aa22.45■■□□□ 1.18
CLCN2-201ENST00000265593 KIF21AQ7Z4S6 1674 aa22.39■■□□□ 1.18
CLCN2-201ENST00000265593 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.17
CLCN2-201ENST00000265593 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
CLCN2-201ENST00000265593 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
CLCN2-201ENST00000265593 SAMD9Q5K651 1589 aa22.34■■□□□ 1.17
CLCN2-201ENST00000265593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.32■■□□□ 1.16
CLCN2-201ENST00000265593 FGD6Q6ZV73 1430 aa22.32■■□□□ 1.16
CLCN2-201ENST00000265593 TARBP1Q13395 1621 aaKnown RBP22.29■■□□□ 1.16
CLCN2-201ENST00000265593 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
CLCN2-201ENST00000265593 LRRIQ1Q96JM4 1722 aa22.28■■□□□ 1.16
CLCN2-201ENST00000265593 GRIN2BQ13224 1484 aa22.26■■□□□ 1.15
CLCN2-201ENST00000265593 NCOA2Q15596 1464 aa22.23■■□□□ 1.15
CLCN2-201ENST00000265593 PTPRKQ15262 1439 aa22.2■■□□□ 1.14
CLCN2-201ENST00000265593 MYOM3Q5VTT5 1437 aa22.19■■□□□ 1.14
CLCN2-201ENST00000265593 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
CLCN2-201ENST00000265593 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
CLCN2-201ENST00000265593 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
CLCN2-201ENST00000265593 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
CLCN2-201ENST00000265593 TIMELESSQ9UNS1 1208 aa22.16■■□□□ 1.14
CLCN2-201ENST00000265593 EHBP1L1Q8N3D4 1523 aa22.16■■□□□ 1.14
CLCN2-201ENST00000265593 HFM1A2PYH4 1435 aa22.15■■□□□ 1.14
CLCN2-201ENST00000265593 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
CLCN2-201ENST00000265593 MAGI3Q5TCQ9 1506 aa22.12■■□□□ 1.13
CLCN2-201ENST00000265593 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
CLCN2-201ENST00000265593 TSHZ2Q9NRE2 1034 aa22.12■■□□□ 1.13
CLCN2-201ENST00000265593 PPP1R15AO75807 674 aaPredicted RBP22.12■■□□□ 1.13
CLCN2-201ENST00000265593 PTPN23Q9H3S7 1636 aa22.12■■□□□ 1.13
CLCN2-201ENST00000265593 KCNH8Q96L42 1107 aa22.11■■□□□ 1.13
CLCN2-201ENST00000265593 ADAMTS12P58397 1594 aa22.11■■□□□ 1.13
CLCN2-201ENST00000265593 UGGT2Q9NYU1 1516 aa22.1■■□□□ 1.13
CLCN2-201ENST00000265593 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
CLCN2-201ENST00000265593 NAIPQ13075 1403 aa22.09■■□□□ 1.13
CLCN2-201ENST00000265593 UACAQ9BZF9 1416 aa22.09■■□□□ 1.13
CLCN2-201ENST00000265593 ANP32EQ9BTT0 268 aa22.08■■□□□ 1.13
CLCN2-201ENST00000265593 HIRIP3Q9BW71 556 aaPredicted RBP22.08■■□□□ 1.13
CLCN2-201ENST00000265593 BCL11AQ9H165 835 aa22.08■■□□□ 1.13
CLCN2-201ENST00000265593 ARID3CA6NKF2 412 aa22.08■■□□□ 1.12
CLCN2-201ENST00000265593 FKBP8Q14318 412 aa22.08■■□□□ 1.12
CLCN2-201ENST00000265593 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
CLCN2-201ENST00000265593 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
CLCN2-201ENST00000265593 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
CLCN2-201ENST00000265593 EPRSP07814 1512 aaKnown RBP22.04■■□□□ 1.12
CLCN2-201ENST00000265593 CHIC2Q9UKJ5 165 aa22.04■■□□□ 1.12
CLCN2-201ENST00000265593 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
CLCN2-201ENST00000265593 RRP7BPQ9NSQ0 103 aa22.03■■□□□ 1.12
CLCN2-201ENST00000265593 CDK13Q14004 1512 aaKnown RBP22.03■■□□□ 1.12
CLCN2-201ENST00000265593 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
CLCN2-201ENST00000265593 WDR62O43379 1518 aa21.98■■□□□ 1.11
CLCN2-201ENST00000265593 TCOF1Q13428 1488 aaKnown RBP21.97■■□□□ 1.11
CLCN2-201ENST00000265593 NEFLP07196 543 aa21.96■■□□□ 1.11
CLCN2-201ENST00000265593 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
CLCN2-201ENST00000265593 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
CLCN2-201ENST00000265593 MIA2Q96PC5 1412 aa21.9■■□□□ 1.1
CLCN2-201ENST00000265593 GCC2Q8IWJ2 1684 aa21.89■■□□□ 1.09
CLCN2-201ENST00000265593 DISP1Q96F81 1524 aa21.88■■□□□ 1.09
CLCN2-201ENST00000265593 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
CLCN2-201ENST00000265593 ERICH6Q7L0X2 663 aa21.87■■□□□ 1.09
CLCN2-201ENST00000265593 KDM6BO15054 1643 aa21.86■■□□□ 1.09
CLCN2-201ENST00000265593 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
CLCN2-201ENST00000265593 AKNAQ7Z591 1439 aa21.85■■□□□ 1.09
CLCN2-201ENST00000265593 EIF4G3O43432 1585 aaKnown RBP21.85■■□□□ 1.09
CLCN2-201ENST00000265593 ANP32CO43423 234 aa21.84■■□□□ 1.09
CLCN2-201ENST00000265593 DENND4BO75064 1496 aaPredicted RBP21.83■■□□□ 1.09
CLCN2-201ENST00000265593 IRX6P78412 446 aaPredicted RBP21.83■■□□□ 1.08
CLCN2-201ENST00000265593 KDM5BQ9UGL1 1544 aa21.83■■□□□ 1.08
CLCN2-201ENST00000265593 NUP153P49790 1475 aaKnown RBP21.82■■□□□ 1.08
CLCN2-201ENST00000265593 ERCC6Q03468 1493 aa21.81■■□□□ 1.08
CLCN2-201ENST00000265593 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms