RNA–Protein interactions for RNA: ENST00000265593.8

CLCN2-201, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCN2, Length 3,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-201ENST00000265593 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
CLCN2-201ENST00000265593 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
CLCN2-201ENST00000265593 CCDC180Q9P1Z9 1646 aa27.53■■■□□ 2
CLCN2-201ENST00000265593 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
CLCN2-201ENST00000265593 SUPT5HO00267 1087 aaKnown RBP26.97■■□□□ 1.91
CLCN2-201ENST00000265593 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
CLCN2-201ENST00000265593 DCAF1Q9Y4B6 1507 aa26.51■■□□□ 1.84
CLCN2-201ENST00000265593 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.77
CLCN2-201ENST00000265593 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
CLCN2-201ENST00000265593 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
CLCN2-201ENST00000265593 ABCC9O60706 1549 aa25.76■■□□□ 1.71
CLCN2-201ENST00000265593 PCGF6Q9BYE7 350 aa25.59■■□□□ 1.69
CLCN2-201ENST00000265593 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
CLCN2-201ENST00000265593 PPARGC1BQ86YN6 1023 aaKnown RBP25.51■■□□□ 1.67
CLCN2-201ENST00000265593 NACADO15069 1562 aa25.49■■□□□ 1.67
CLCN2-201ENST00000265593 HRCP23327 699 aa25.42■■□□□ 1.66
CLCN2-201ENST00000265593 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
CLCN2-201ENST00000265593 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
CLCN2-201ENST00000265593 CECR2Q9BXF3 1484 aa25.25■■□□□ 1.63
CLCN2-201ENST00000265593 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.62
CLCN2-201ENST00000265593 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
CLCN2-201ENST00000265593 WIZO95785 1651 aa25.01■■□□□ 1.59
CLCN2-201ENST00000265593 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
CLCN2-201ENST00000265593 BAZ1AQ9NRL2 1556 aaPredicted RBP24.85■■□□□ 1.57
CLCN2-201ENST00000265593 TRIM26Q12899 539 aaPredicted RBP24.77■■□□□ 1.56
CLCN2-201ENST00000265593 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
CLCN2-201ENST00000265593 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
CLCN2-201ENST00000265593 SMARCA4P51532 1647 aa24.65■■□□□ 1.54
CLCN2-201ENST00000265593 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
CLCN2-201ENST00000265593 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
CLCN2-201ENST00000265593 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
CLCN2-201ENST00000265593 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
CLCN2-201ENST00000265593 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
CLCN2-201ENST00000265593 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
CLCN2-201ENST00000265593 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
CLCN2-201ENST00000265593 ZEB1P37275 1124 aaPredicted RBP24.17■■□□□ 1.46
CLCN2-201ENST00000265593 SOGA1O94964 1423 aa24.17■■□□□ 1.46
CLCN2-201ENST00000265593 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
CLCN2-201ENST00000265593 SCAF1Q9H7N4 1312 aaKnown RBP24.15■■□□□ 1.46
CLCN2-201ENST00000265593 PELP1Q8IZL8 1130 aaKnown RBP24.11■■□□□ 1.45
CLCN2-201ENST00000265593 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
CLCN2-201ENST00000265593 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
CLCN2-201ENST00000265593 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
CLCN2-201ENST00000265593 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
CLCN2-201ENST00000265593 TTBK1Q5TCY1 1321 aaPredicted RBP24.02■■□□□ 1.44
CLCN2-201ENST00000265593 EEA1Q15075 1411 aa24.02■■□□□ 1.44
CLCN2-201ENST00000265593 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
CLCN2-201ENST00000265593 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
CLCN2-201ENST00000265593 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
CLCN2-201ENST00000265593 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
CLCN2-201ENST00000265593 SYNJ1O43426 1573 aa23.9■■□□□ 1.42
CLCN2-201ENST00000265593 GOLGA3Q08378 1498 aa23.86■■□□□ 1.41
CLCN2-201ENST00000265593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.4
CLCN2-201ENST00000265593 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
CLCN2-201ENST00000265593 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
CLCN2-201ENST00000265593 KIF21BO75037 1637 aa23.69■■□□□ 1.38
CLCN2-201ENST00000265593 YTHDC1Q96MU7 727 aaKnown RBP23.67■■□□□ 1.38
CLCN2-201ENST00000265593 NEUROD1Q13562 356 aa23.66■■□□□ 1.38
CLCN2-201ENST00000265593 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
CLCN2-201ENST00000265593 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
CLCN2-201ENST00000265593 CLIP1P30622 1438 aa23.6■■□□□ 1.37
CLCN2-201ENST00000265593 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
CLCN2-201ENST00000265593 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
CLCN2-201ENST00000265593 HMGXB3Q12766 1538 aa23.58■■□□□ 1.36
CLCN2-201ENST00000265593 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
CLCN2-201ENST00000265593 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
CLCN2-201ENST00000265593 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
CLCN2-201ENST00000265593 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
CLCN2-201ENST00000265593 CENPBP07199 599 aaPredicted RBP23.47■■□□□ 1.35
CLCN2-201ENST00000265593 DIEXFQ68CQ4 756 aaKnown RBP23.44■■□□□ 1.34
CLCN2-201ENST00000265593 CUX1P39880 1505 aa23.41■■□□□ 1.34
CLCN2-201ENST00000265593 APLP2Q06481 763 aa23.41■■□□□ 1.34
CLCN2-201ENST00000265593 CFTRP13569 1480 aa23.38■■□□□ 1.33
CLCN2-201ENST00000265593 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
CLCN2-201ENST00000265593 PRXQ9BXM0 1461 aa23.35■■□□□ 1.33
CLCN2-201ENST00000265593 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
CLCN2-201ENST00000265593 KIF27Q86VH2 1401 aa23.3■■□□□ 1.32
CLCN2-201ENST00000265593 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
CLCN2-201ENST00000265593 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
CLCN2-201ENST00000265593 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
CLCN2-201ENST00000265593 CUX2O14529 1486 aa23.1■■□□□ 1.29
CLCN2-201ENST00000265593 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
CLCN2-201ENST00000265593 ZNF316A6NFI3 1004 aaPredicted RBP23.07■■□□□ 1.28
CLCN2-201ENST00000265593 CC2D2AQ9P2K1 1620 aa23.07■■□□□ 1.28
CLCN2-201ENST00000265593 IGF1RP08069 1367 aa23.04■■□□□ 1.28
CLCN2-201ENST00000265593 ARHGAP35Q9NRY4 1499 aa23.04■■□□□ 1.28
CLCN2-201ENST00000265593 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
CLCN2-201ENST00000265593 MYT1Q01538 1121 aa23■■□□□ 1.27
CLCN2-201ENST00000265593 CARMIL1Q5VZK9 1371 aa22.96■■□□□ 1.27
CLCN2-201ENST00000265593 FANCD2Q9BXW9 1451 aa22.93■■□□□ 1.26
CLCN2-201ENST00000265593 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.26
CLCN2-201ENST00000265593 DHX57Q6P158 1386 aaKnown RBP22.85■■□□□ 1.25
CLCN2-201ENST00000265593 MIER1Q8N108 512 aa22.84■■□□□ 1.25
CLCN2-201ENST00000265593 CCNB3Q8WWL7 1395 aa22.83■■□□□ 1.25
CLCN2-201ENST00000265593 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
CLCN2-201ENST00000265593 NESP48681 1621 aa22.81■■□□□ 1.24
CLCN2-201ENST00000265593 CLSPNQ9HAW4 1339 aa22.8■■□□□ 1.24
CLCN2-201ENST00000265593 ITGAEP38570 1179 aa22.8■■□□□ 1.24
CLCN2-201ENST00000265593 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
CLCN2-201ENST00000265593 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms