RNA–Protein interactions for RNA: ENST00000264904.8

USO1-201, Transcript of USO1 vesicle transport factor, humanhuman

TSL 2 BASIC

Gene USO1, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-201ENST00000264904 SIN3AQ96ST3 1273 aa18.3■□□□□ 0.52
USO1-201ENST00000264904 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
USO1-201ENST00000264904 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
USO1-201ENST00000264904 VPS8Q8N3P4 1428 aa18.28■□□□□ 0.52
USO1-201ENST00000264904 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.51
USO1-201ENST00000264904 CARMIL1Q5VZK9 1371 aa18.25■□□□□ 0.51
USO1-201ENST00000264904 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
USO1-201ENST00000264904 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
USO1-201ENST00000264904 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
USO1-201ENST00000264904 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
USO1-201ENST00000264904 NCAPD3P42695 1498 aa18.21■□□□□ 0.5
USO1-201ENST00000264904 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
USO1-201ENST00000264904 TONSLQ96HA7 1378 aa18.15■□□□□ 0.5
USO1-201ENST00000264904 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
USO1-201ENST00000264904 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
USO1-201ENST00000264904 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
USO1-201ENST00000264904 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
USO1-201ENST00000264904 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
USO1-201ENST00000264904 B4GALNT3Q6L9W6 998 aa18.08■□□□□ 0.48
USO1-201ENST00000264904 ARXQ96QS3 562 aa18.07■□□□□ 0.48
USO1-201ENST00000264904 ZBTB47Q9UFB7 747 aaPredicted RBP18.07■□□□□ 0.48
USO1-201ENST00000264904 MRS2Q9HD23 443 aa18.06■□□□□ 0.48
USO1-201ENST00000264904 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
USO1-201ENST00000264904 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
USO1-201ENST00000264904 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
USO1-201ENST00000264904 CCDC136Q96JN2 1154 aa18.03■□□□□ 0.48
USO1-201ENST00000264904 FANCD2Q9BXW9 1451 aa18.03■□□□□ 0.48
USO1-201ENST00000264904 CFTRP13569 1480 aa18.01■□□□□ 0.47
USO1-201ENST00000264904 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
USO1-201ENST00000264904 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
USO1-201ENST00000264904 IGF1RP08069 1367 aa17.99■□□□□ 0.47
USO1-201ENST00000264904 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
USO1-201ENST00000264904 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
USO1-201ENST00000264904 HMGXB3Q12766 1538 aa17.97■□□□□ 0.47
USO1-201ENST00000264904 RRP7BPQ9NSQ0 103 aa17.96■□□□□ 0.47
USO1-201ENST00000264904 DEKP35659 375 aaKnown RBP17.96■□□□□ 0.47
USO1-201ENST00000264904 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
USO1-201ENST00000264904 CUX1P39880 1505 aa17.94■□□□□ 0.46
USO1-201ENST00000264904 KIF21BO75037 1637 aa17.94■□□□□ 0.46
USO1-201ENST00000264904 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
USO1-201ENST00000264904 DHX57Q6P158 1386 aaKnown RBP17.94■□□□□ 0.46
USO1-201ENST00000264904 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
USO1-201ENST00000264904 FHOD3Q2V2M9 1422 aa17.93■□□□□ 0.46
USO1-201ENST00000264904 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
USO1-201ENST00000264904 GLIPR1L2Q4G1C9 344 aa17.9■□□□□ 0.46
USO1-201ENST00000264904 NESP48681 1621 aa17.89■□□□□ 0.45
USO1-201ENST00000264904 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
USO1-201ENST00000264904 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
USO1-201ENST00000264904 LAS1LQ9Y4W2 734 aaKnown RBP17.87■□□□□ 0.45
USO1-201ENST00000264904 PPP4R2Q9NY27 417 aa17.85■□□□□ 0.45
USO1-201ENST00000264904 ERCC6Q03468 1493 aa17.85■□□□□ 0.45
USO1-201ENST00000264904 ARAP1Q96P48 1450 aa17.85■□□□□ 0.45
USO1-201ENST00000264904 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
USO1-201ENST00000264904 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.45
USO1-201ENST00000264904 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.44
USO1-201ENST00000264904 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
USO1-201ENST00000264904 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
USO1-201ENST00000264904 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
USO1-201ENST00000264904 ARHGAP35Q9NRY4 1499 aa17.78■□□□□ 0.44
USO1-201ENST00000264904 SETD5Q9C0A6 1442 aa17.77■□□□□ 0.44
USO1-201ENST00000264904 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
USO1-201ENST00000264904 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
USO1-201ENST00000264904 HSP90AA1P07900 732 aaKnown RBP17.74■□□□□ 0.43
USO1-201ENST00000264904 PPP1R15AO75807 674 aaPredicted RBP17.73■□□□□ 0.43
USO1-201ENST00000264904 ANP32BQ92688 251 aaKnown RBP17.71■□□□□ 0.43
USO1-201ENST00000264904 KDM2AQ9Y2K7 1162 aa17.71■□□□□ 0.43
USO1-201ENST00000264904 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
USO1-201ENST00000264904 FOXD1Q16676 465 aa17.7■□□□□ 0.42
USO1-201ENST00000264904 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
USO1-201ENST00000264904 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
USO1-201ENST00000264904 NEFMP07197 916 aa17.7■□□□□ 0.42
USO1-201ENST00000264904 PLEKHD1A6NEE1 506 aa17.69■□□□□ 0.42
USO1-201ENST00000264904 HSPA5P11021 654 aaKnown RBP17.69■□□□□ 0.42
USO1-201ENST00000264904 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
USO1-201ENST00000264904 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
USO1-201ENST00000264904 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
USO1-201ENST00000264904 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
USO1-201ENST00000264904 PHLDB1Q86UU1 1377 aa17.65■□□□□ 0.42
USO1-201ENST00000264904 UPF2Q9HAU5 1272 aaKnown RBP17.65■□□□□ 0.42
USO1-201ENST00000264904 MSH5O43196 834 aa17.65■□□□□ 0.42
USO1-201ENST00000264904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.413e-7■□□□□ 9.6
USO1-201ENST00000264904 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
USO1-201ENST00000264904 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.414e-8■■■■■ 34.1
USO1-201ENST00000264904 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
USO1-201ENST00000264904 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
USO1-201ENST00000264904 RRBP1Q9P2E9 1410 aaKnown RBP17.54■□□□□ 0.4
USO1-201ENST00000264904 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
USO1-201ENST00000264904 FANCIQ9NVI1 1328 aa17.53■□□□□ 0.4
USO1-201ENST00000264904 PAK3O75914 559 aaPredicted RBP17.51■□□□□ 0.39
USO1-201ENST00000264904 TIMELESSQ9UNS1 1208 aa17.51■□□□□ 0.39
USO1-201ENST00000264904 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
USO1-201ENST00000264904 ABCA10Q8WWZ4 1543 aa17.5■□□□□ 0.39
USO1-201ENST00000264904 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
USO1-201ENST00000264904 ERICH6BQ5W0A0 696 aa17.49■□□□□ 0.39
USO1-201ENST00000264904 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.49■□□□□ 0.39
USO1-201ENST00000264904 NAP1L5Q96NT1 182 aaPredicted RBP17.49■□□□□ 0.39
USO1-201ENST00000264904 RGS3P49796 1198 aa17.49■□□□□ 0.39
USO1-201ENST00000264904 ANO8Q9HCE9 1232 aaPredicted RBP17.48■□□□□ 0.39
USO1-201ENST00000264904 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
USO1-201ENST00000264904 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms