RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 DCAF1Q9Y4B6 1507 aa8.81□□□□□ -1
BRIP1-201ENST00000259008 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
BRIP1-201ENST00000259008 CLIP1P30622 1438 aa8.81□□□□□ -1
BRIP1-201ENST00000259008 RGL3Q3MIN7 710 aa8.81□□□□□ -1
BRIP1-201ENST00000259008 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
BRIP1-201ENST00000259008 CEP164Q9UPV0 1460 aa8.8□□□□□ -1
BRIP1-201ENST00000259008 OSCARQ8IYS5 282 aa8.79□□□□□ -1
BRIP1-201ENST00000259008 TONSLQ96HA7 1378 aa8.79□□□□□ -1
BRIP1-201ENST00000259008 ANP32CO43423 234 aa8.79□□□□□ -1
BRIP1-201ENST00000259008 CCDC88BA6NC98 1476 aa8.78□□□□□ -1
BRIP1-201ENST00000259008 CARMIL1Q5VZK9 1371 aa8.77□□□□□ -1
BRIP1-201ENST00000259008 WIZO95785 1651 aa8.77□□□□□ -1.01
BRIP1-201ENST00000259008 GGT6Q6P531 493 aa8.77□□□□□ -1.01
BRIP1-201ENST00000259008 GOLGA3Q08378 1498 aa8.76□□□□□ -1.01
BRIP1-201ENST00000259008 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
BRIP1-201ENST00000259008 TMC1Q8TDI8 760 aa8.75□□□□□ -1.01
BRIP1-201ENST00000259008 CADPSQ9ULU8 1353 aa8.75□□□□□ -1.01
BRIP1-201ENST00000259008 ABCC8Q09428 1581 aa8.74□□□□□ -1.01
BRIP1-201ENST00000259008 CCNB3Q8WWL7 1395 aa8.73□□□□□ -1.01
BRIP1-201ENST00000259008 ARXQ96QS3 562 aa8.73□□□□□ -1.01
BRIP1-201ENST00000259008 DIEXFQ68CQ4 756 aaKnown RBP8.72□□□□□ -1.01
BRIP1-201ENST00000259008 NPM2Q86SE8 214 aaKnown RBP8.72□□□□□ -1.01
BRIP1-201ENST00000259008 FANCD2Q9BXW9 1451 aa8.71□□□□□ -1.01
BRIP1-201ENST00000259008 POGKQ9P215 609 aa8.71□□□□□ -1.02
BRIP1-201ENST00000259008 ATAD2BQ9ULI0 1458 aa8.71□□□□□ -1.02
BRIP1-201ENST00000259008 SALL2Q9Y467 1007 aaPredicted RBP8.7□□□□□ -1.02
BRIP1-201ENST00000259008 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
BRIP1-201ENST00000259008 SMARCA4P51532 1647 aa8.69□□□□□ -1.02
BRIP1-201ENST00000259008 KANK1Q14678 1352 aa8.69□□□□□ -1.02
BRIP1-201ENST00000259008 CEP162Q5TB80 1403 aa8.68□□□□□ -1.02
BRIP1-201ENST00000259008 TOP2AP11388 1531 aaKnown RBP8.67□□□□□ -1.02
BRIP1-201ENST00000259008 EEA1Q15075 1411 aa8.67□□□□□ -1.02
BRIP1-201ENST00000259008 SOX12O15370 315 aa8.66□□□□□ -1.02
BRIP1-201ENST00000259008 SAFB2Q14151 953 aaKnown RBP eCLIP8.66□□□□□ -1.02
BRIP1-201ENST00000259008 JPH4Q96JJ6 628 aa8.66□□□□□ -1.02
BRIP1-201ENST00000259008 CC2D2AQ9P2K1 1620 aa8.66□□□□□ -1.02
BRIP1-201ENST00000259008 FAM69CQ0P6D2 419 aa8.66□□□□□ -1.02
BRIP1-201ENST00000259008 HDGFP51858 240 aaKnown RBP8.65□□□□□ -1.02
BRIP1-201ENST00000259008 HIRIP3Q9BW71 556 aaPredicted RBP8.65□□□□□ -1.02
BRIP1-201ENST00000259008 NPHP1O15259 732 aa8.64□□□□□ -1.03
BRIP1-201ENST00000259008 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
BRIP1-201ENST00000259008 STK26Q9P289 416 aa8.64□□□□□ -1.03
BRIP1-201ENST00000259008 ZNF316A6NFI3 1004 aaPredicted RBP8.63□□□□□ -1.03
BRIP1-201ENST00000259008 DNAJC5BQ9UF47 199 aa8.63□□□□□ -1.03
BRIP1-201ENST00000259008 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
BRIP1-201ENST00000259008 WDR43Q15061 677 aaKnown RBP eCLIP8.62□□□□□ -1.03
BRIP1-201ENST00000259008 EFCAB2Q5VUJ9 269 aa8.62□□□□□ -1.03
BRIP1-201ENST00000259008 PAK3O75914 559 aaPredicted RBP8.61□□□□□ -1.03
BRIP1-201ENST00000259008 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
BRIP1-201ENST00000259008 HNRNPMP52272 730 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRIP1-201ENST00000259008 FHAD1B1AJZ9 1412 aa8.6□□□□□ -1.03
BRIP1-201ENST00000259008 KIF3BO15066 747 aa8.59□□□□□ -1.03
BRIP1-201ENST00000259008 TNNT2P45379 298 aaPredicted RBP8.59□□□□□ -1.03
BRIP1-201ENST00000259008 NESP48681 1621 aa8.59□□□□□ -1.03
BRIP1-201ENST00000259008 DDX10Q13206 875 aaKnown RBP8.59□□□□□ -1.03
BRIP1-201ENST00000259008 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.03
BRIP1-201ENST00000259008 MYO15BQ96JP2 1530 aa8.58□□□□□ -1.04
BRIP1-201ENST00000259008 RAD54L2Q9Y4B4 1467 aa8.58□□□□□ -1.04
BRIP1-201ENST00000259008 EID1Q9Y6B2 187 aa8.58□□□□□ -1.04
BRIP1-201ENST00000259008 SRPK2P78362 688 aaKnown RBP8.57□□□□□ -1.04
BRIP1-201ENST00000259008 PTPRGP23470 1445 aa8.57□□□□□ -1.04
BRIP1-201ENST00000259008 WASHC2CQ9Y4E1 1318 aa8.57□□□□□ -1.04
BRIP1-201ENST00000259008 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
BRIP1-201ENST00000259008 TNIKQ9UKE5 1360 aa8.56□□□□□ -1.04
BRIP1-201ENST00000259008 FHOD3Q2V2M9 1422 aa8.55□□□□□ -1.04
BRIP1-201ENST00000259008 MEX3CQ5U5Q3 659 aaKnown RBP8.55□□□□□ -1.04
BRIP1-201ENST00000259008 SPAG9O60271 1321 aaKnown RBP8.55□□□□□ -1.04
BRIP1-201ENST00000259008 SENP3-EIF4A1A0A087X0R7 540 aa8.55□□□□□ -1.04
BRIP1-201ENST00000259008 DCAF11Q8TEB1 546 aa8.55□□□□□ -1.04
BRIP1-201ENST00000259008 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
BRIP1-201ENST00000259008 RAPGEF2Q9Y4G8 1499 aa8.54□□□□□ -1.04
BRIP1-201ENST00000259008 LAS1LQ9Y4W2 734 aaKnown RBP8.54□□□□□ -1.04
BRIP1-201ENST00000259008 GAPVD1Q14C86 1478 aa8.54□□□□□ -1.04
BRIP1-201ENST00000259008 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
BRIP1-201ENST00000259008 PHF23Q9BUL5 403 aaPredicted RBP8.53□□□□□ -1.04
BRIP1-201ENST00000259008 FGD5Q6ZNL6 1462 aa8.53□□□□□ -1.04
BRIP1-201ENST00000259008 PRDM2Q13029 1718 aa8.53□□□□□ -1.04
BRIP1-201ENST00000259008 FOXD1Q16676 465 aa8.53□□□□□ -1.04
BRIP1-201ENST00000259008 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
BRIP1-201ENST00000259008 ARHGAP35Q9NRY4 1499 aa8.52□□□□□ -1.05
BRIP1-201ENST00000259008 KNSTRNQ9Y448 316 aa8.52□□□□□ -1.05
BRIP1-201ENST00000259008 MRC2Q9UBG0 1479 aa8.52□□□□□ -1.05
BRIP1-201ENST00000259008 FMN1Q68DA7 1419 aa8.51□□□□□ -1.05
BRIP1-201ENST00000259008 CFAP53Q96M91 514 aa8.5□□□□□ -1.05
BRIP1-201ENST00000259008 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
BRIP1-201ENST00000259008 CDCA8Q53HL2 280 aa8.49□□□□□ -1.05
BRIP1-201ENST00000259008 PKD2Q13563 968 aa8.49□□□□□ -1.05
BRIP1-201ENST00000259008 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRIP1-201ENST00000259008 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
BRIP1-201ENST00000259008 U2SURPO15042 1029 aaKnown RBP8.48□□□□□ -1.05
BRIP1-201ENST00000259008 CC2D1BQ5T0F9 858 aaKnown RBP8.48□□□□□ -1.05
BRIP1-201ENST00000259008 MRS2Q9HD23 443 aa8.48□□□□□ -1.05
BRIP1-201ENST00000259008 NCAPD3P42695 1498 aa8.47□□□□□ -1.05
BRIP1-201ENST00000259008 KANK4Q5T7N3 995 aaPredicted RBP8.47□□□□□ -1.05
BRIP1-201ENST00000259008 ZNF330Q9Y3S2 320 aaPredicted RBP8.47□□□□□ -1.05
BRIP1-201ENST00000259008 NUP155O75694 1391 aa8.47□□□□□ -1.05
BRIP1-201ENST00000259008 ANKRD30AQ9BXX3 1397 aa8.46□□□□□ -1.06
BRIP1-201ENST00000259008 MAPK8IP3Q9UPT6 1336 aa8.45□□□□□ -1.06
BRIP1-201ENST00000259008 CCDC18Q5T9S5 1454 aa8.45□□□□□ -1.06
BRIP1-201ENST00000259008 NGDNQ8NEJ9 315 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms