RNA–Protein interactions for RNA: ENST00000255194.10

AP3B1-201, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3B1, Length 5,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-201ENST00000255194 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
AP3B1-201ENST00000255194 ACIN1Q9UKV3 1341 aaKnown RBP13.05□□□□□ -0.32
AP3B1-201ENST00000255194 HAP1P54257 671 aaPredicted RBP13.05□□□□□ -0.32
AP3B1-201ENST00000255194 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
AP3B1-201ENST00000255194 AEBP2Q6ZN18 517 aaPredicted RBP13.03□□□□□ -0.32
AP3B1-201ENST00000255194 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.32
AP3B1-201ENST00000255194 MLECQ14165 292 aa13.02□□□□□ -0.32
AP3B1-201ENST00000255194 KANK1Q14678 1352 aa13.01□□□□□ -0.33
AP3B1-201ENST00000255194 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
AP3B1-201ENST00000255194 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
AP3B1-201ENST00000255194 ANP32CO43423 234 aa13□□□□□ -0.33
AP3B1-201ENST00000255194 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
AP3B1-201ENST00000255194 HDGFP51858 240 aaKnown RBP12.99□□□□□ -0.33
AP3B1-201ENST00000255194 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
AP3B1-201ENST00000255194 ZBTB7CA1YPR0 619 aa12.98□□□□□ -0.33
AP3B1-201ENST00000255194 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
AP3B1-201ENST00000255194 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
AP3B1-201ENST00000255194 A0A0G2JS52 829 aa12.96□□□□□ -0.33
AP3B1-201ENST00000255194 KDM2AQ9Y2K7 1162 aa12.96□□□□□ -0.33
AP3B1-201ENST00000255194 HRCP23327 699 aa12.96□□□□□ -0.33
AP3B1-201ENST00000255194 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
AP3B1-201ENST00000255194 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
AP3B1-201ENST00000255194 CANXP27824 592 aaKnown RBP12.94□□□□□ -0.34
AP3B1-201ENST00000255194 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
AP3B1-201ENST00000255194 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
AP3B1-201ENST00000255194 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
AP3B1-201ENST00000255194 TNIKQ9UKE5 1360 aa12.91□□□□□ -0.34
AP3B1-201ENST00000255194 MRC2Q9UBG0 1479 aa12.88□□□□□ -0.35
AP3B1-201ENST00000255194 EFCAB2Q5VUJ9 269 aa12.88□□□□□ -0.35
AP3B1-201ENST00000255194 JPH4Q96JJ6 628 aa12.87□□□□□ -0.35
AP3B1-201ENST00000255194 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
AP3B1-201ENST00000255194 FMN1Q68DA7 1419 aa12.84□□□□□ -0.35
AP3B1-201ENST00000255194 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
AP3B1-201ENST00000255194 GGT6Q6P531 493 aa12.84□□□□□ -0.35
AP3B1-201ENST00000255194 POGKQ9P215 609 aa12.83□□□□□ -0.36
AP3B1-201ENST00000255194 RGL3Q3MIN7 710 aa12.83□□□□□ -0.36
AP3B1-201ENST00000255194 LMOD2Q6P5Q4 547 aa12.81□□□□□ -0.36
AP3B1-201ENST00000255194 GAPVD1Q14C86 1478 aa12.81□□□□□ -0.36
AP3B1-201ENST00000255194 PTPRGP23470 1445 aa12.81□□□□□ -0.36
AP3B1-201ENST00000255194 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
AP3B1-201ENST00000255194 MYT1Q01538 1121 aa12.8□□□□□ -0.36
AP3B1-201ENST00000255194 TMC1Q8TDI8 760 aa12.79□□□□□ -0.36
AP3B1-201ENST00000255194 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
AP3B1-201ENST00000255194 IFT140Q96RY7 1462 aa12.77□□□□□ -0.37
AP3B1-201ENST00000255194 ARHGAP35Q9NRY4 1499 aa12.77□□□□□ -0.37
AP3B1-201ENST00000255194 FAM69CQ0P6D2 419 aa12.76□□□□□ -0.37
AP3B1-201ENST00000255194 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
AP3B1-201ENST00000255194 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
AP3B1-201ENST00000255194 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
AP3B1-201ENST00000255194 EID1Q9Y6B2 187 aa12.75□□□□□ -0.37
AP3B1-201ENST00000255194 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
AP3B1-201ENST00000255194 CCDC18Q5T9S5 1454 aa12.73□□□□□ -0.37
AP3B1-201ENST00000255194 RAD54L2Q9Y4B4 1467 aa12.73□□□□□ -0.37
AP3B1-201ENST00000255194 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
AP3B1-201ENST00000255194 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
AP3B1-201ENST00000255194 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
AP3B1-201ENST00000255194 SPAG9O60271 1321 aaKnown RBP12.71□□□□□ -0.37
AP3B1-201ENST00000255194 NESP48681 1621 aa12.71□□□□□ -0.37
AP3B1-201ENST00000255194 RSPH4AQ5TD94 716 aa12.68□□□□□ -0.38
AP3B1-201ENST00000255194 FHOD3Q2V2M9 1422 aa12.68□□□□□ -0.38
AP3B1-201ENST00000255194 ANKRD30AQ9BXX3 1397 aa12.68□□□□□ -0.38
AP3B1-201ENST00000255194 WASHC2CQ9Y4E1 1318 aa12.67□□□□□ -0.38
AP3B1-201ENST00000255194 KIF3BO15066 747 aa12.66□□□□□ -0.38
AP3B1-201ENST00000255194 CFAP53Q96M91 514 aa12.66□□□□□ -0.38
AP3B1-201ENST00000255194 EIF4G2P78344 907 aaKnown RBP eCLIP12.65□□□□□ -0.38
AP3B1-201ENST00000255194 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
AP3B1-201ENST00000255194 HNRNPMP52272 730 aaKnown RBP eCLIP12.65□□□□□ -0.383e-7■■■■□ 23.4
AP3B1-201ENST00000255194 CARD11Q9BXL7 1154 aa12.64□□□□□ -0.39
AP3B1-201ENST00000255194 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
AP3B1-201ENST00000255194 CFTRP13569 1480 aa12.63□□□□□ -0.39
AP3B1-201ENST00000255194 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
AP3B1-201ENST00000255194 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
AP3B1-201ENST00000255194 ARXQ96QS3 562 aa12.61□□□□□ -0.39
AP3B1-201ENST00000255194 NPHP1O15259 732 aa12.61□□□□□ -0.39
AP3B1-201ENST00000255194 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
AP3B1-201ENST00000255194 VPS8Q8N3P4 1428 aa12.6□□□□□ -0.39
AP3B1-201ENST00000255194 SRPK2P78362 688 aaKnown RBP12.59□□□□□ -0.39
AP3B1-201ENST00000255194 PRG4Q92954 1404 aaPredicted RBP12.59□□□□□ -0.39
AP3B1-201ENST00000255194 BICRAQ9NZM4 1560 aa12.59□□□□□ -0.39
AP3B1-201ENST00000255194 STK26Q9P289 416 aa12.58□□□□□ -0.4
AP3B1-201ENST00000255194 SNAPC4Q5SXM2 1469 aa12.58□□□□□ -0.4
AP3B1-201ENST00000255194 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
AP3B1-201ENST00000255194 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
AP3B1-201ENST00000255194 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
AP3B1-201ENST00000255194 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
AP3B1-201ENST00000255194 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
AP3B1-201ENST00000255194 NUP155O75694 1391 aa12.55□□□□□ -0.4
AP3B1-201ENST00000255194 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.4
AP3B1-201ENST00000255194 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
AP3B1-201ENST00000255194 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
AP3B1-201ENST00000255194 PKD2Q13563 968 aa12.54□□□□□ -0.4
AP3B1-201ENST00000255194 NUDCQ9Y266 331 aa12.54□□□□□ -0.4
AP3B1-201ENST00000255194 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
AP3B1-201ENST00000255194 HDGFL2Q7Z4V5 671 aaPredicted RBP12.53□□□□□ -0.4
AP3B1-201ENST00000255194 TMF1P82094 1093 aa12.52□□□□□ -0.41
AP3B1-201ENST00000255194 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.52□□□□□ -0.41
AP3B1-201ENST00000255194 IGF1RP08069 1367 aa12.52□□□□□ -0.41
AP3B1-201ENST00000255194 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
AP3B1-201ENST00000255194 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
AP3B1-201ENST00000255194 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms