RNA–Protein interactions for RNA: ENST00000255194.10

AP3B1-201, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3B1, Length 5,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-201ENST00000255194 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
AP3B1-201ENST00000255194 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
AP3B1-201ENST00000255194 SHROOM4Q9ULL8 1493 aa15.83■□□□□ 0.12
AP3B1-201ENST00000255194 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
AP3B1-201ENST00000255194 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
AP3B1-201ENST00000255194 ABCC9O60706 1549 aa15.22■□□□□ 0.03
AP3B1-201ENST00000255194 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
AP3B1-201ENST00000255194 APLP2Q06481 763 aa15.08■□□□□ 0
AP3B1-201ENST00000255194 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
AP3B1-201ENST00000255194 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
AP3B1-201ENST00000255194 ATP1B4Q9UN42 357 aaPredicted RBP14.79□□□□□ -0.04
AP3B1-201ENST00000255194 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
AP3B1-201ENST00000255194 UBTFP17480 764 aaKnown RBP14.61□□□□□ -0.07
AP3B1-201ENST00000255194 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
AP3B1-201ENST00000255194 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
AP3B1-201ENST00000255194 MYT1LQ9UL68 1186 aa14.51□□□□□ -0.09
AP3B1-201ENST00000255194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
AP3B1-201ENST00000255194 HNRNPUL2Q1KMD3 747 aaKnown RBP14.49□□□□□ -0.09
AP3B1-201ENST00000255194 RB1CC1Q8TDY2 1594 aa14.4□□□□□ -0.11
AP3B1-201ENST00000255194 SCRIBQ14160 1630 aa14.36□□□□□ -0.11
AP3B1-201ENST00000255194 FBLN2P98095 1184 aa14.31□□□□□ -0.12
AP3B1-201ENST00000255194 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
AP3B1-201ENST00000255194 NACADO15069 1562 aa14.15□□□□□ -0.14
AP3B1-201ENST00000255194 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
AP3B1-201ENST00000255194 PCGF6Q9BYE7 350 aa14.03□□□□□ -0.16
AP3B1-201ENST00000255194 ITGAEP38570 1179 aa13.96□□□□□ -0.17
AP3B1-201ENST00000255194 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.17
AP3B1-201ENST00000255194 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
AP3B1-201ENST00000255194 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
AP3B1-201ENST00000255194 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
AP3B1-201ENST00000255194 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.19
AP3B1-201ENST00000255194 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
AP3B1-201ENST00000255194 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
AP3B1-201ENST00000255194 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
AP3B1-201ENST00000255194 CHMP7Q8WUX9 453 aaPredicted RBP13.8□□□□□ -0.2
AP3B1-201ENST00000255194 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
AP3B1-201ENST00000255194 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.21
AP3B1-201ENST00000255194 ARID3CA6NKF2 412 aa13.75□□□□□ -0.21
AP3B1-201ENST00000255194 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
AP3B1-201ENST00000255194 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
AP3B1-201ENST00000255194 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
AP3B1-201ENST00000255194 BCANQ96GW7 911 aa13.73□□□□□ -0.21
AP3B1-201ENST00000255194 POLR3GLQ9BT43 218 aa13.72□□□□□ -0.21
AP3B1-201ENST00000255194 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
AP3B1-201ENST00000255194 ZNF777Q9ULD5 760 aaPredicted RBP13.66□□□□□ -0.22
AP3B1-201ENST00000255194 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
AP3B1-201ENST00000255194 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
AP3B1-201ENST00000255194 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
AP3B1-201ENST00000255194 BAZ1AQ9NRL2 1556 aaPredicted RBP13.59□□□□□ -0.23
AP3B1-201ENST00000255194 TRIM26Q12899 539 aaPredicted RBP13.59□□□□□ -0.23
AP3B1-201ENST00000255194 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
AP3B1-201ENST00000255194 SMARCA2P51531 1590 aa13.52□□□□□ -0.25
AP3B1-201ENST00000255194 CECR2Q9BXF3 1484 aa13.51□□□□□ -0.25
AP3B1-201ENST00000255194 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
AP3B1-201ENST00000255194 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
AP3B1-201ENST00000255194 RSF1Q96T23 1441 aaPredicted RBP13.46□□□□□ -0.26
AP3B1-201ENST00000255194 ZNF326Q5BKZ1 582 aaKnown RBP13.43□□□□□ -0.26
AP3B1-201ENST00000255194 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
AP3B1-201ENST00000255194 MYO15BQ96JP2 1530 aa13.4□□□□□ -0.26
AP3B1-201ENST00000255194 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
AP3B1-201ENST00000255194 CNGB1Q14028 1251 aaPredicted RBP13.4□□□□□ -0.26
AP3B1-201ENST00000255194 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
AP3B1-201ENST00000255194 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
AP3B1-201ENST00000255194 CENPBP07199 599 aaPredicted RBP13.38□□□□□ -0.27
AP3B1-201ENST00000255194 WRNQ14191 1432 aaPredicted RBP eCLIP13.37□□□□□ -0.27
AP3B1-201ENST00000255194 NEFLP07196 543 aa13.37□□□□□ -0.27
AP3B1-201ENST00000255194 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
AP3B1-201ENST00000255194 PLEKHD1A6NEE1 506 aa13.36□□□□□ -0.27
AP3B1-201ENST00000255194 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
AP3B1-201ENST00000255194 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
AP3B1-201ENST00000255194 MTUS2Q5JR59 1369 aa13.3□□□□□ -0.28
AP3B1-201ENST00000255194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.281e-6■■■□□ 15.5
AP3B1-201ENST00000255194 EIF4G1Q04637 1599 aaKnown RBP13.3□□□□□ -0.28
AP3B1-201ENST00000255194 EEA1Q15075 1411 aa13.25□□□□□ -0.29
AP3B1-201ENST00000255194 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
AP3B1-201ENST00000255194 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
AP3B1-201ENST00000255194 NEFMP07197 916 aa13.24□□□□□ -0.29
AP3B1-201ENST00000255194 YTHDC1Q96MU7 727 aaKnown RBP13.23□□□□□ -0.29
AP3B1-201ENST00000255194 PPP1R15AO75807 674 aaPredicted RBP13.22□□□□□ -0.29
AP3B1-201ENST00000255194 CUX2O14529 1486 aa13.21□□□□□ -0.29
AP3B1-201ENST00000255194 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
AP3B1-201ENST00000255194 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
AP3B1-201ENST00000255194 SOGA1O94964 1423 aa13.2□□□□□ -0.3
AP3B1-201ENST00000255194 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
AP3B1-201ENST00000255194 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
AP3B1-201ENST00000255194 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
AP3B1-201ENST00000255194 C14orf37Q86TY3 774 aa13.17□□□□□ -0.3
AP3B1-201ENST00000255194 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
AP3B1-201ENST00000255194 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
AP3B1-201ENST00000255194 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
AP3B1-201ENST00000255194 CLIP1P30622 1438 aa13.16□□□□□ -0.3
AP3B1-201ENST00000255194 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
AP3B1-201ENST00000255194 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
AP3B1-201ENST00000255194 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
AP3B1-201ENST00000255194 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
AP3B1-201ENST00000255194 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
AP3B1-201ENST00000255194 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
AP3B1-201ENST00000255194 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
AP3B1-201ENST00000255194 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
AP3B1-201ENST00000255194 WIZO95785 1651 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms