RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
RFX1-201ENST00000254325 DNMBPQ6XZF7 1577 aa22.7■■□□□ 1.22
RFX1-201ENST00000254325 CLSPNQ9HAW4 1339 aa22.64■■□□□ 1.21
RFX1-201ENST00000254325 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
RFX1-201ENST00000254325 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
RFX1-201ENST00000254325 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
RFX1-201ENST00000254325 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
RFX1-201ENST00000254325 FMN1Q68DA7 1419 aa22.59■■□□□ 1.21
RFX1-201ENST00000254325 LAMC3Q9Y6N6 1575 aa22.58■■□□□ 1.2
RFX1-201ENST00000254325 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
RFX1-201ENST00000254325 ERCC6Q03468 1493 aa22.55■■□□□ 1.2
RFX1-201ENST00000254325 DHX57Q6P158 1386 aaKnown RBP22.54■■□□□ 1.2
RFX1-201ENST00000254325 MIER1Q8N108 512 aa22.54■■□□□ 1.2
RFX1-201ENST00000254325 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
RFX1-201ENST00000254325 RAB3GAP2Q9H2M9 1393 aa22.52■■□□□ 1.2
RFX1-201ENST00000254325 CHIC2Q9UKJ5 165 aa22.52■■□□□ 1.2
RFX1-201ENST00000254325 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
RFX1-201ENST00000254325 RRBP1Q9P2E9 1410 aaKnown RBP22.5■■□□□ 1.19
RFX1-201ENST00000254325 SETD5Q9C0A6 1442 aa22.5■■□□□ 1.19
RFX1-201ENST00000254325 LRRC9Q6ZRR7 1453 aa22.49■■□□□ 1.19
RFX1-201ENST00000254325 CDK11AQ9UQ88 783 aaPredicted RBP22.49■■□□□ 1.19
RFX1-201ENST00000254325 GTF3C3Q9Y5Q9 886 aa22.48■■□□□ 1.19
RFX1-201ENST00000254325 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
RFX1-201ENST00000254325 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
RFX1-201ENST00000254325 TIAM1Q13009 1591 aa22.44■■□□□ 1.18
RFX1-201ENST00000254325 SIN3AQ96ST3 1273 aa22.44■■□□□ 1.18
RFX1-201ENST00000254325 AQRO60306 1485 aaKnown RBP eCLIP22.43■■□□□ 1.181e-6■■■■■ 36.5
RFX1-201ENST00000254325 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
RFX1-201ENST00000254325 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
RFX1-201ENST00000254325 TONSLQ96HA7 1378 aa22.39■■□□□ 1.18
RFX1-201ENST00000254325 EFCAB5A4FU69 1503 aa22.39■■□□□ 1.17
RFX1-201ENST00000254325 ZNF777Q9ULD5 760 aaPredicted RBP22.39■■□□□ 1.17
RFX1-201ENST00000254325 CUL7Q14999 1698 aa22.38■■□□□ 1.17
RFX1-201ENST00000254325 FYCO1Q9BQS8 1478 aa22.36■■□□□ 1.17
RFX1-201ENST00000254325 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.17
RFX1-201ENST00000254325 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.17
RFX1-201ENST00000254325 MAP3K1Q13233 1512 aa22.29■■□□□ 1.16
RFX1-201ENST00000254325 DDX10Q13206 875 aaKnown RBP22.28■■□□□ 1.16
RFX1-201ENST00000254325 HIRIP3Q9BW71 556 aaPredicted RBP22.27■■□□□ 1.16
RFX1-201ENST00000254325 GRIN2BQ13224 1484 aa22.26■■□□□ 1.15
RFX1-201ENST00000254325 FGD6Q6ZV73 1430 aa22.24■■□□□ 1.15
RFX1-201ENST00000254325 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
RFX1-201ENST00000254325 KIF21AQ7Z4S6 1674 aa22.19■■□□□ 1.14
RFX1-201ENST00000254325 ANP32CO43423 234 aa22.18■■□□□ 1.14
RFX1-201ENST00000254325 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
RFX1-201ENST00000254325 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
RFX1-201ENST00000254325 NCOA2Q15596 1464 aa22.17■■□□□ 1.14
RFX1-201ENST00000254325 TIMELESSQ9UNS1 1208 aa22.16■■□□□ 1.14
RFX1-201ENST00000254325 MYOM3Q5VTT5 1437 aa22.16■■□□□ 1.14
RFX1-201ENST00000254325 PLEKHD1A6NEE1 506 aa22.15■■□□□ 1.14
RFX1-201ENST00000254325 CTTNBP2Q8WZ74 1663 aa22.14■■□□□ 1.13
RFX1-201ENST00000254325 POLR3GLQ9BT43 218 aa22.14■■□□□ 1.13
RFX1-201ENST00000254325 ZNF326Q5BKZ1 582 aaKnown RBP22.11■■□□□ 1.13
RFX1-201ENST00000254325 CCDC18Q5T9S5 1454 aa22.11■■□□□ 1.13
RFX1-201ENST00000254325 CARMIL2Q6F5E8 1435 aa22.1■■□□□ 1.13
RFX1-201ENST00000254325 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
RFX1-201ENST00000254325 ZNF608Q9ULD9 1512 aaPredicted RBP22.09■■□□□ 1.13
RFX1-201ENST00000254325 SLC4A1APQ9BWU0 796 aaKnown RBP22.09■■□□□ 1.13
RFX1-201ENST00000254325 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.12
RFX1-201ENST00000254325 SNAPC4Q5SXM2 1469 aa22.08■■□□□ 1.12
RFX1-201ENST00000254325 IQGAP2Q13576 1575 aa22.07■■□□□ 1.12
RFX1-201ENST00000254325 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
RFX1-201ENST00000254325 NEFLP07196 543 aa22.04■■□□□ 1.12
RFX1-201ENST00000254325 EHBP1L1Q8N3D4 1523 aa22.04■■□□□ 1.12
RFX1-201ENST00000254325 CNGB1Q14028 1251 aaPredicted RBP22.03■■□□□ 1.12
RFX1-201ENST00000254325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
RFX1-201ENST00000254325 CFAP43Q8NDM7 1665 aa22.03■■□□□ 1.12
RFX1-201ENST00000254325 TSPY4P0CV99 314 aa22.03■■□□□ 1.12
RFX1-201ENST00000254325 TSPY10P0CW01 314 aa22.03■■□□□ 1.12
RFX1-201ENST00000254325 MYT1LQ9UL68 1186 aa22.01■■□□□ 1.11
RFX1-201ENST00000254325 FOXD1Q16676 465 aa21.99■■□□□ 1.11
RFX1-201ENST00000254325 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
RFX1-201ENST00000254325 SUPT6HQ7KZ85 1726 aaKnown RBP21.98■■□□□ 1.11
RFX1-201ENST00000254325 KIAA0586Q9BVV6 1533 aa21.98■■□□□ 1.11
RFX1-201ENST00000254325 MPHOSPH9Q99550 1183 aa21.97■■□□□ 1.11
RFX1-201ENST00000254325 EPRSP07814 1512 aaKnown RBP21.97■■□□□ 1.11
RFX1-201ENST00000254325 CDK13Q14004 1512 aaKnown RBP21.97■■□□□ 1.11
RFX1-201ENST00000254325 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
RFX1-201ENST00000254325 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
RFX1-201ENST00000254325 ZNF644Q9H582 1327 aaPredicted RBP21.94■■□□□ 1.1
RFX1-201ENST00000254325 HFM1A2PYH4 1435 aa21.94■■□□□ 1.1
RFX1-201ENST00000254325 EIF4G2P78344 907 aaKnown RBP eCLIP21.94■■□□□ 1.1
RFX1-201ENST00000254325 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
RFX1-201ENST00000254325 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
RFX1-201ENST00000254325 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
RFX1-201ENST00000254325 KCNH8Q96L42 1107 aa21.9■■□□□ 1.1
RFX1-201ENST00000254325 SAMD9Q5K651 1589 aa21.89■■□□□ 1.09
RFX1-201ENST00000254325 PBRM1Q86U86 1689 aa21.89■■□□□ 1.09
RFX1-201ENST00000254325 NAIPQ13075 1403 aa21.88■■□□□ 1.09
RFX1-201ENST00000254325 MAPKBP1O60336 1514 aa21.87■■□□□ 1.09
RFX1-201ENST00000254325 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
RFX1-201ENST00000254325 PTPN23Q9H3S7 1636 aa21.85■■□□□ 1.09
RFX1-201ENST00000254325 PTPRKQ15262 1439 aa21.85■■□□□ 1.09
RFX1-201ENST00000254325 MIA2Q96PC5 1412 aa21.85■■□□□ 1.09
RFX1-201ENST00000254325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.83■■□□□ 1.09
RFX1-201ENST00000254325 SYNJ2O15056 1496 aa21.83■■□□□ 1.08
RFX1-201ENST00000254325 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.08
RFX1-201ENST00000254325 WDR62O43379 1518 aa21.82■■□□□ 1.08
RFX1-201ENST00000254325 PRG4Q92954 1404 aaPredicted RBP21.81■■□□□ 1.08
RFX1-201ENST00000254325 L3MBTL2Q969R5 705 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms