RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 DHX57Q6P158 1386 aaKnown RBP35.63■■■■□ 3.29
GDF1-201ENST00000247005 CUL7Q14999 1698 aa35.62■■■■□ 3.29
GDF1-201ENST00000247005 KIF21AQ7Z4S6 1674 aa35.61■■■■□ 3.29
GDF1-201ENST00000247005 WDR97A6NE52 1622 aa35.61■■■■□ 3.29
GDF1-201ENST00000247005 FHAD1B1AJZ9 1412 aa35.6■■■■□ 3.29
GDF1-201ENST00000247005 LRRC9Q6ZRR7 1453 aa35.58■■■■□ 3.29
GDF1-201ENST00000247005 PCF11O94913 1555 aaKnown RBP35.58■■■■□ 3.29
GDF1-201ENST00000247005 MAP3K1Q13233 1512 aa35.56■■■■□ 3.28
GDF1-201ENST00000247005 GAPVD1Q14C86 1478 aa35.54■■■■□ 3.28
GDF1-201ENST00000247005 PHLDB1Q86UU1 1377 aa35.52■■■■□ 3.28
GDF1-201ENST00000247005 ABCA5Q8WWZ7 1642 aa35.51■■■■□ 3.27
GDF1-201ENST00000247005 CTTNBP2Q8WZ74 1663 aa35.48■■■■□ 3.27
GDF1-201ENST00000247005 EFCAB5A4FU69 1503 aa35.44■■■■□ 3.26
GDF1-201ENST00000247005 FAM50AQ14320 339 aaKnown RBP35.41■■■■□ 3.26
GDF1-201ENST00000247005 CLSPNQ9HAW4 1339 aa35.4■■■■□ 3.26
GDF1-201ENST00000247005 CFAP43Q8NDM7 1665 aa35.39■■■■□ 3.26
GDF1-201ENST00000247005 CASKIN1Q8WXD9 1431 aa35.38■■■■□ 3.25
GDF1-201ENST00000247005 FYCO1Q9BQS8 1478 aa35.37■■■■□ 3.25
GDF1-201ENST00000247005 SCAF1Q9H7N4 1312 aaKnown RBP35.36■■■■□ 3.25
GDF1-201ENST00000247005 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
GDF1-201ENST00000247005 RAB3GAP2Q9H2M9 1393 aa35.33■■■■□ 3.25
GDF1-201ENST00000247005 AQRO60306 1485 aaKnown RBP eCLIP35.28■■■■□ 3.24
GDF1-201ENST00000247005 FMN1Q68DA7 1419 aa35.28■■■■□ 3.24
GDF1-201ENST00000247005 PELP1Q8IZL8 1130 aaKnown RBP35.27■■■■□ 3.24
GDF1-201ENST00000247005 NEUROD1Q13562 356 aa35.25■■■■□ 3.23
GDF1-201ENST00000247005 SNAPC4Q5SXM2 1469 aa35.24■■■■□ 3.23
GDF1-201ENST00000247005 SAMD9Q5K651 1589 aa35.2■■■■□ 3.23
GDF1-201ENST00000247005 SETD5Q9C0A6 1442 aa35.19■■■■□ 3.22
GDF1-201ENST00000247005 MIER1Q8N108 512 aa35.19■■■■□ 3.22
GDF1-201ENST00000247005 ACIN1Q9UKV3 1341 aaKnown RBP35.18■■■■□ 3.22
GDF1-201ENST00000247005 MRC2Q9UBG0 1479 aa35.18■■■■□ 3.22
GDF1-201ENST00000247005 MTUS2Q5JR59 1369 aa35.12■■■■□ 3.21
GDF1-201ENST00000247005 PBRM1Q86U86 1689 aa35.11■■■■□ 3.21
GDF1-201ENST00000247005 LRRIQ1Q96JM4 1722 aa35.08■■■■□ 3.21
GDF1-201ENST00000247005 MAPKBP1O60336 1514 aa35.07■■■■□ 3.21
GDF1-201ENST00000247005 GRIN2BQ13224 1484 aa35.05■■■■□ 3.2
GDF1-201ENST00000247005 ZNF608Q9ULD9 1512 aaPredicted RBP35.04■■■■□ 3.2
GDF1-201ENST00000247005 YTHDC1Q96MU7 727 aaKnown RBP35.04■■■■□ 3.2
GDF1-201ENST00000247005 CENPBP07199 599 aaPredicted RBP35.02■■■■□ 3.2
GDF1-201ENST00000247005 FGD6Q6ZV73 1430 aa35.01■■■■□ 3.2
GDF1-201ENST00000247005 ADAMTS12P58397 1594 aa34.99■■■■□ 3.19
GDF1-201ENST00000247005 SIN3AQ96ST3 1273 aa34.96■■■■□ 3.19
GDF1-201ENST00000247005 ARID3CA6NKF2 412 aa34.93■■■■□ 3.18
GDF1-201ENST00000247005 NCOA2Q15596 1464 aa34.93■■■■□ 3.18
GDF1-201ENST00000247005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.93■■■■□ 3.18
GDF1-201ENST00000247005 IQGAP2Q13576 1575 aa34.92■■■■□ 3.18
GDF1-201ENST00000247005 IFT140Q96RY7 1462 aa34.9■■■■□ 3.18
GDF1-201ENST00000247005 WDR62O43379 1518 aa34.88■■■■□ 3.17
GDF1-201ENST00000247005 PTPRKQ15262 1439 aa34.87■■■■□ 3.17
GDF1-201ENST00000247005 MAGI3Q5TCQ9 1506 aa34.86■■■■□ 3.17
GDF1-201ENST00000247005 THOC2Q8NI27 1593 aaKnown RBP34.84■■■■□ 3.17
GDF1-201ENST00000247005 MYOM3Q5VTT5 1437 aa34.83■■■■□ 3.17
GDF1-201ENST00000247005 GTF3C3Q9Y5Q9 886 aa34.81■■■■□ 3.16
GDF1-201ENST00000247005 ERCC6Q03468 1493 aa34.79■■■■□ 3.16
GDF1-201ENST00000247005 EHBP1L1Q8N3D4 1523 aa34.79■■■■□ 3.16
GDF1-201ENST00000247005 SUPT6HQ7KZ85 1726 aaKnown RBP34.79■■■■□ 3.16
GDF1-201ENST00000247005 CDK13Q14004 1512 aaKnown RBP34.74■■■■□ 3.15
GDF1-201ENST00000247005 CCDC18Q5T9S5 1454 aa34.74■■■■□ 3.15
GDF1-201ENST00000247005 EPRSP07814 1512 aaKnown RBP34.73■■■■□ 3.15
GDF1-201ENST00000247005 UGGT2Q9NYU1 1516 aa34.72■■■■□ 3.15
GDF1-201ENST00000247005 HECW1Q76N89 1606 aa34.72■■■■□ 3.15
GDF1-201ENST00000247005 EIF4G3O43432 1585 aaKnown RBP34.69■■■■□ 3.14
GDF1-201ENST00000247005 HFM1A2PYH4 1435 aa34.67■■■■□ 3.14
GDF1-201ENST00000247005 ARHGEF11O15085 1522 aa34.67■■■■□ 3.14
GDF1-201ENST00000247005 CHIC2Q9UKJ5 165 aa34.66■■■■□ 3.14
GDF1-201ENST00000247005 PTPN23Q9H3S7 1636 aa34.66■■■■□ 3.14
GDF1-201ENST00000247005 KIAA0586Q9BVV6 1533 aa34.65■■■■□ 3.14
GDF1-201ENST00000247005 GRIN2AQ12879 1464 aa34.63■■■■□ 3.13
GDF1-201ENST00000247005 NAIPQ13075 1403 aa34.63■■■■□ 3.13
GDF1-201ENST00000247005 RRP7BPQ9NSQ0 103 aa34.61■■■■□ 3.13
GDF1-201ENST00000247005 DISP1Q96F81 1524 aa34.61■■■■□ 3.13
GDF1-201ENST00000247005 FBLN2P98095 1184 aa34.61■■■■□ 3.13
GDF1-201ENST00000247005 CHMP7Q8WUX9 453 aaPredicted RBP34.58■■■■□ 3.13
GDF1-201ENST00000247005 KIAA0556O60303 1618 aa34.56■■■■□ 3.12
GDF1-201ENST00000247005 UACAQ9BZF9 1416 aa34.54■■■■□ 3.12
GDF1-201ENST00000247005 PPP1R15AO75807 674 aaPredicted RBP34.51■■■■□ 3.11
GDF1-201ENST00000247005 HIRIP3Q9BW71 556 aaPredicted RBP34.49■■■■□ 3.11
GDF1-201ENST00000247005 TIMELESSQ9UNS1 1208 aa34.49■■■■□ 3.11
GDF1-201ENST00000247005 TCOF1Q13428 1488 aaKnown RBP34.49■■■■□ 3.11
GDF1-201ENST00000247005 NUP153P49790 1475 aaKnown RBP34.46■■■■□ 3.11
GDF1-201ENST00000247005 MAGI1Q96QZ7 1491 aaPredicted RBP34.44■■■■□ 3.1
GDF1-201ENST00000247005 CEP170Q5SW79 1584 aa34.42■■■■□ 3.1
GDF1-201ENST00000247005 SYNJ2O15056 1496 aa34.41■■■■□ 3.1
GDF1-201ENST00000247005 TONSLQ96HA7 1378 aa34.41■■■■□ 3.1
GDF1-201ENST00000247005 MIA2Q96PC5 1412 aa34.39■■■■□ 3.1
GDF1-201ENST00000247005 TRIM52Q96A61 297 aa34.38■■■■□ 3.09
GDF1-201ENST00000247005 ZNF644Q9H582 1327 aaPredicted RBP34.38■■■■□ 3.09
GDF1-201ENST00000247005 DDX10Q13206 875 aaKnown RBP34.37■■■■□ 3.09
GDF1-201ENST00000247005 RAPGEF6Q8TEU7 1601 aa34.37■■■■□ 3.09
GDF1-201ENST00000247005 KDM6BO15054 1643 aa34.35■■■■□ 3.09
GDF1-201ENST00000247005 PLB1Q6P1J6 1458 aa34.33■■■■□ 3.09
GDF1-201ENST00000247005 JPH4Q96JJ6 628 aa34.32■■■■□ 3.08
GDF1-201ENST00000247005 PRG4Q92954 1404 aaPredicted RBP34.29■■■■□ 3.08
GDF1-201ENST00000247005 KCNH8Q96L42 1107 aa34.29■■■■□ 3.08
GDF1-201ENST00000247005 CDK11AQ9UQ88 783 aaPredicted RBP34.29■■■■□ 3.08
GDF1-201ENST00000247005 GCC2Q8IWJ2 1684 aa34.26■■■■□ 3.07
GDF1-201ENST00000247005 DENND4BO75064 1496 aaPredicted RBP34.25■■■■□ 3.07
GDF1-201ENST00000247005 FOXD1Q16676 465 aa34.22■■■■□ 3.07
GDF1-201ENST00000247005 NUP160Q12769 1436 aa34.22■■■■□ 3.07
GDF1-201ENST00000247005 DAPK1P53355 1430 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms