RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 CFAP43Q8NDM7 1665 aa31.86■■■□□ 2.69
SH2D3A-201ENST00000245908 NESP48681 1621 aa31.86■■■□□ 2.69
SH2D3A-201ENST00000245908 LRRC9Q6ZRR7 1453 aa31.86■■■□□ 2.69
SH2D3A-201ENST00000245908 CUL7Q14999 1698 aa31.85■■■□□ 2.69
SH2D3A-201ENST00000245908 PCF11O94913 1555 aaKnown RBP31.81■■■□□ 2.68
SH2D3A-201ENST00000245908 LAMC3Q9Y6N6 1575 aa31.8■■■□□ 2.68
SH2D3A-201ENST00000245908 EFCAB5A4FU69 1503 aa31.79■■■□□ 2.68
SH2D3A-201ENST00000245908 WDR97A6NE52 1622 aa31.77■■■□□ 2.68
SH2D3A-201ENST00000245908 MIER1Q8N108 512 aa31.77■■■□□ 2.68
SH2D3A-201ENST00000245908 CTTNBP2Q8WZ74 1663 aa31.76■■■□□ 2.67
SH2D3A-201ENST00000245908 GTF3C3Q9Y5Q9 886 aa31.7■■■□□ 2.66
SH2D3A-201ENST00000245908 FYCO1Q9BQS8 1478 aa31.7■■■□□ 2.66
SH2D3A-201ENST00000245908 PHLDB1Q86UU1 1377 aa31.7■■■□□ 2.66
SH2D3A-201ENST00000245908 URB2Q14146 1524 aaKnown RBP31.69■■■□□ 2.66
SH2D3A-201ENST00000245908 AQRO60306 1485 aaKnown RBP eCLIP31.68■■■□□ 2.662e-6■■■■■ 26.9
SH2D3A-201ENST00000245908 FHOD3Q2V2M9 1422 aa31.67■■■□□ 2.66
SH2D3A-201ENST00000245908 RAB3GAP2Q9H2M9 1393 aa31.66■■■□□ 2.66
SH2D3A-201ENST00000245908 ITGAEP38570 1179 aa31.65■■■□□ 2.66
SH2D3A-201ENST00000245908 CASKIN1Q8WXD9 1431 aa31.64■■■□□ 2.65
SH2D3A-201ENST00000245908 ABCA5Q8WWZ7 1642 aa31.62■■■□□ 2.65
SH2D3A-201ENST00000245908 P3H3Q8IVL6 736 aa31.62■■■□□ 2.65
SH2D3A-201ENST00000245908 SETD5Q9C0A6 1442 aa31.6■■■□□ 2.65
SH2D3A-201ENST00000245908 MAPKBP1O60336 1514 aa31.59■■■□□ 2.65
SH2D3A-201ENST00000245908 YTHDC1Q96MU7 727 aaKnown RBP31.55■■■□□ 2.64
SH2D3A-201ENST00000245908 FMN1Q68DA7 1419 aa31.52■■■□□ 2.64
SH2D3A-201ENST00000245908 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
SH2D3A-201ENST00000245908 SAMD9Q5K651 1589 aa31.49■■■□□ 2.63
SH2D3A-201ENST00000245908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.49■■■□□ 2.63
SH2D3A-201ENST00000245908 SNAPC4Q5SXM2 1469 aa31.48■■■□□ 2.63
SH2D3A-201ENST00000245908 GAPVD1Q14C86 1478 aa31.47■■■□□ 2.63
SH2D3A-201ENST00000245908 FAM50AQ14320 339 aaKnown RBP31.46■■■□□ 2.63
SH2D3A-201ENST00000245908 ATP1B4Q9UN42 357 aaPredicted RBP31.46■■■□□ 2.63
SH2D3A-201ENST00000245908 TDRD9Q8NDG6 1382 aaKnown RBP31.44■■■□□ 2.62
SH2D3A-201ENST00000245908 KIF21AQ7Z4S6 1674 aa31.44■■■□□ 2.62
SH2D3A-201ENST00000245908 TARBP1Q13395 1621 aaKnown RBP31.36■■■□□ 2.61
SH2D3A-201ENST00000245908 LRRIQ1Q96JM4 1722 aa31.35■■■□□ 2.61
SH2D3A-201ENST00000245908 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
SH2D3A-201ENST00000245908 FGD6Q6ZV73 1430 aa31.33■■■□□ 2.61
SH2D3A-201ENST00000245908 GRIN2BQ13224 1484 aa31.31■■■□□ 2.6
SH2D3A-201ENST00000245908 DNAJC5BQ9UF47 199 aa31.27■■■□□ 2.6
SH2D3A-201ENST00000245908 MTUS2Q5JR59 1369 aa31.26■■■□□ 2.6
SH2D3A-201ENST00000245908 PBRM1Q86U86 1689 aa31.23■■■□□ 2.59
SH2D3A-201ENST00000245908 TIMELESSQ9UNS1 1208 aa31.21■■■□□ 2.59
SH2D3A-201ENST00000245908 EHBP1L1Q8N3D4 1523 aa31.2■■■□□ 2.58
SH2D3A-201ENST00000245908 SUPT6HQ7KZ85 1726 aaKnown RBP31.19■■■□□ 2.58
SH2D3A-201ENST00000245908 NCOA2Q15596 1464 aa31.18■■■□□ 2.58
SH2D3A-201ENST00000245908 SIN3AQ96ST3 1273 aa31.17■■■□□ 2.58
SH2D3A-201ENST00000245908 MYOM3Q5VTT5 1437 aa31.15■■■□□ 2.58
SH2D3A-201ENST00000245908 HFM1A2PYH4 1435 aa31.13■■■□□ 2.57
SH2D3A-201ENST00000245908 CCDC18Q5T9S5 1454 aa31.11■■■□□ 2.57
SH2D3A-201ENST00000245908 PTPN23Q9H3S7 1636 aa31.11■■■□□ 2.57
SH2D3A-201ENST00000245908 ADAMTS12P58397 1594 aa31.11■■■□□ 2.57
SH2D3A-201ENST00000245908 PTPRKQ15262 1439 aa31.1■■■□□ 2.57
SH2D3A-201ENST00000245908 ARHGEF11O15085 1522 aa31.1■■■□□ 2.57
SH2D3A-201ENST00000245908 UGGT2Q9NYU1 1516 aa31.09■■■□□ 2.57
SH2D3A-201ENST00000245908 IQGAP2Q13576 1575 aa31.08■■■□□ 2.57
SH2D3A-201ENST00000245908 MRC2Q9UBG0 1479 aa31.06■■■□□ 2.56
SH2D3A-201ENST00000245908 HECW1Q76N89 1606 aa31.06■■■□□ 2.56
SH2D3A-201ENST00000245908 MAGI3Q5TCQ9 1506 aa31.05■■■□□ 2.56
SH2D3A-201ENST00000245908 UACAQ9BZF9 1416 aa31.04■■■□□ 2.56
SH2D3A-201ENST00000245908 NAIPQ13075 1403 aa31■■■□□ 2.55
SH2D3A-201ENST00000245908 PPP1R15AO75807 674 aaPredicted RBP30.99■■■□□ 2.55
SH2D3A-201ENST00000245908 TCOF1Q13428 1488 aaKnown RBP30.97■■■□□ 2.55
SH2D3A-201ENST00000245908 EPRSP07814 1512 aaKnown RBP30.93■■■□□ 2.54
SH2D3A-201ENST00000245908 WDR62O43379 1518 aa30.92■■■□□ 2.54
SH2D3A-201ENST00000245908 GCC2Q8IWJ2 1684 aa30.89■■■□□ 2.54
SH2D3A-201ENST00000245908 IFT140Q96RY7 1462 aa30.88■■■□□ 2.53
SH2D3A-201ENST00000245908 TONSLQ96HA7 1378 aa30.87■■■□□ 2.53
SH2D3A-201ENST00000245908 AKNAQ7Z591 1439 aa30.83■■■□□ 2.53
SH2D3A-201ENST00000245908 CDK13Q14004 1512 aaKnown RBP30.83■■■□□ 2.53
SH2D3A-201ENST00000245908 DDX10Q13206 875 aaKnown RBP30.82■■■□□ 2.52
SH2D3A-201ENST00000245908 MIA2Q96PC5 1412 aa30.82■■■□□ 2.52
SH2D3A-201ENST00000245908 ZNF608Q9ULD9 1512 aaPredicted RBP30.8■■■□□ 2.52
SH2D3A-201ENST00000245908 KIAA0586Q9BVV6 1533 aa30.76■■■□□ 2.51
SH2D3A-201ENST00000245908 KIAA0556O60303 1618 aa30.75■■■□□ 2.51
SH2D3A-201ENST00000245908 KCNH8Q96L42 1107 aa30.75■■■□□ 2.51
SH2D3A-201ENST00000245908 KDM5BQ9UGL1 1544 aa30.74■■■□□ 2.51
SH2D3A-201ENST00000245908 DISP1Q96F81 1524 aa30.72■■■□□ 2.51
SH2D3A-201ENST00000245908 RRP7BPQ9NSQ0 103 aa30.7■■■□□ 2.5
SH2D3A-201ENST00000245908 EIF4G3O43432 1585 aaKnown RBP30.68■■■□□ 2.5
SH2D3A-201ENST00000245908 KDM6BO15054 1643 aa30.68■■■□□ 2.5
SH2D3A-201ENST00000245908 DENND4BO75064 1496 aaPredicted RBP30.68■■■□□ 2.5
SH2D3A-201ENST00000245908 HIRIP3Q9BW71 556 aaPredicted RBP30.67■■■□□ 2.5
SH2D3A-201ENST00000245908 SUPT16HQ9Y5B9 1047 aaKnown RBP30.66■■■□□ 2.5
SH2D3A-201ENST00000245908 GRIN2AQ12879 1464 aa30.66■■■□□ 2.5
SH2D3A-201ENST00000245908 CHIC2Q9UKJ5 165 aa30.66■■■□□ 2.5
SH2D3A-201ENST00000245908 RAPGEF6Q8TEU7 1601 aa30.64■■■□□ 2.49
SH2D3A-201ENST00000245908 NUP153P49790 1475 aaKnown RBP30.62■■■□□ 2.49
SH2D3A-201ENST00000245908 CCER2I3L3R5 266 aa30.61■■■□□ 2.49
SH2D3A-201ENST00000245908 DNMT1P26358 1616 aaKnown RBP30.58■■■□□ 2.49
SH2D3A-201ENST00000245908 ROCK1Q13464 1354 aa30.56■■■□□ 2.48
SH2D3A-201ENST00000245908 ARID3CA6NKF2 412 aa30.56■■■□□ 2.48
SH2D3A-201ENST00000245908 DAPK1P53355 1430 aa30.56■■■□□ 2.48
SH2D3A-201ENST00000245908 ANP32CO43423 234 aa30.55■■■□□ 2.48
SH2D3A-201ENST00000245908 TRIM52Q96A61 297 aa30.54■■■□□ 2.48
SH2D3A-201ENST00000245908 MAGI1Q96QZ7 1491 aaPredicted RBP30.53■■■□□ 2.48
SH2D3A-201ENST00000245908 MPHOSPH9Q99550 1183 aa30.5■■■□□ 2.47
SH2D3A-201ENST00000245908 ABCC5O15440 1437 aa30.5■■■□□ 2.47
SH2D3A-201ENST00000245908 CEP170Q5SW79 1584 aa30.47■■■□□ 2.47
SH2D3A-201ENST00000245908 CDK11AQ9UQ88 783 aaPredicted RBP30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms