RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 CUX2O14529 1486 aa26.47■■□□□ 1.83
CHPF-201ENST00000243776 SETD5Q9C0A6 1442 aa26.46■■□□□ 1.83
CHPF-201ENST00000243776 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
CHPF-201ENST00000243776 IGF1RP08069 1367 aa26.44■■□□□ 1.82
CHPF-201ENST00000243776 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
CHPF-201ENST00000243776 ANP32EQ9BTT0 268 aa26.36■■□□□ 1.81
CHPF-201ENST00000243776 PPP1R15AO75807 674 aaPredicted RBP26.36■■□□□ 1.81
CHPF-201ENST00000243776 TIAM1Q13009 1591 aa26.32■■□□□ 1.8
CHPF-201ENST00000243776 NCAPD3P42695 1498 aa26.32■■□□□ 1.8
CHPF-201ENST00000243776 LRRC9Q6ZRR7 1453 aa26.32■■□□□ 1.8
CHPF-201ENST00000243776 CFTRP13569 1480 aa26.32■■□□□ 1.8
CHPF-201ENST00000243776 NEFLP07196 543 aa26.31■■□□□ 1.8
CHPF-201ENST00000243776 ANP32CO43423 234 aa26.3■■□□□ 1.8
CHPF-201ENST00000243776 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
CHPF-201ENST00000243776 IRX6P78412 446 aaPredicted RBP26.23■■□□□ 1.79
CHPF-201ENST00000243776 HMGXB3Q12766 1538 aa26.2■■□□□ 1.78
CHPF-201ENST00000243776 RBM19Q9Y4C8 960 aaKnown RBP26.19■■□□□ 1.78
CHPF-201ENST00000243776 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
CHPF-201ENST00000243776 TONSLQ96HA7 1378 aa26.14■■□□□ 1.78
CHPF-201ENST00000243776 PCF11O94913 1555 aaKnown RBP26.12■■□□□ 1.77
CHPF-201ENST00000243776 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
CHPF-201ENST00000243776 CCER2I3L3R5 266 aa26.08■■□□□ 1.77
CHPF-201ENST00000243776 HNRNPUQ00839 825 aaKnown RBP eCLIP26.08■■□□□ 1.77
CHPF-201ENST00000243776 CADPSQ9ULU8 1353 aa26.06■■□□□ 1.76
CHPF-201ENST00000243776 MAP3K1Q13233 1512 aa26.05■■□□□ 1.76
CHPF-201ENST00000243776 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
CHPF-201ENST00000243776 CHIC2Q9UKJ5 165 aa26.03■■□□□ 1.76
CHPF-201ENST00000243776 TIMELESSQ9UNS1 1208 aa26.03■■□□□ 1.76
CHPF-201ENST00000243776 RRP7BPQ9NSQ0 103 aa25.99■■□□□ 1.75
CHPF-201ENST00000243776 PTPRKQ15262 1439 aa25.98■■□□□ 1.75
CHPF-201ENST00000243776 MTUS2Q5JR59 1369 aa25.97■■□□□ 1.75
CHPF-201ENST00000243776 ARID3CA6NKF2 412 aa25.95■■□□□ 1.74
CHPF-201ENST00000243776 CCDC18Q5T9S5 1454 aa25.94■■□□□ 1.74
CHPF-201ENST00000243776 FGD6Q6ZV73 1430 aa25.93■■□□□ 1.74
CHPF-201ENST00000243776 CNGB1Q14028 1251 aaPredicted RBP25.92■■□□□ 1.74
CHPF-201ENST00000243776 MSH5O43196 834 aa25.91■■□□□ 1.74
CHPF-201ENST00000243776 CFAP43Q8NDM7 1665 aa25.91■■□□□ 1.74
CHPF-201ENST00000243776 CCDC184Q52MB2 194 aa25.9■■□□□ 1.74
CHPF-201ENST00000243776 BCL11AQ9H165 835 aa25.88■■□□□ 1.73
CHPF-201ENST00000243776 AQRO60306 1485 aaKnown RBP eCLIP25.88■■□□□ 1.73
CHPF-201ENST00000243776 HSPA5P11021 654 aaKnown RBP25.88■■□□□ 1.73
CHPF-201ENST00000243776 FOXD1Q16676 465 aa25.88■■□□□ 1.73
CHPF-201ENST00000243776 CASKIN1Q8WXD9 1431 aa25.88■■□□□ 1.73
CHPF-201ENST00000243776 FYCO1Q9BQS8 1478 aa25.85■■□□□ 1.73
CHPF-201ENST00000243776 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
CHPF-201ENST00000243776 WASHC2AQ641Q2 1341 aa25.84■■□□□ 1.73
CHPF-201ENST00000243776 FAM9BQ8IZU0 186 aa25.83■■□□□ 1.73
CHPF-201ENST00000243776 UACAQ9BZF9 1416 aa25.81■■□□□ 1.72
CHPF-201ENST00000243776 SENP3-EIF4A1A0A087X0R7 540 aa25.79■■□□□ 1.72
CHPF-201ENST00000243776 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
CHPF-201ENST00000243776 CDK11AQ9UQ88 783 aaPredicted RBP25.78■■□□□ 1.72
CHPF-201ENST00000243776 NAIPQ13075 1403 aa25.78■■□□□ 1.72
CHPF-201ENST00000243776 HFM1A2PYH4 1435 aa25.77■■□□□ 1.72
CHPF-201ENST00000243776 NESP48681 1621 aa25.76■■□□□ 1.71
CHPF-201ENST00000243776 PRDM2Q13029 1718 aa25.75■■□□□ 1.71
CHPF-201ENST00000243776 POLA1P09884 1462 aaPredicted RBP25.75■■□□□ 1.71
CHPF-201ENST00000243776 C11orf95C9JLR9 678 aaPredicted RBP25.74■■□□□ 1.71
CHPF-201ENST00000243776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.74■■□□□ 1.715e-6■■■■■ 46.2
CHPF-201ENST00000243776 FMN1Q68DA7 1419 aa25.73■■□□□ 1.71
CHPF-201ENST00000243776 PTPN23Q9H3S7 1636 aa25.73■■□□□ 1.71
CHPF-201ENST00000243776 NCOA2Q15596 1464 aa25.73■■□□□ 1.71
CHPF-201ENST00000243776 EIF4G2P78344 907 aaKnown RBP eCLIP25.7■■□□□ 1.71
CHPF-201ENST00000243776 B4GALNT3Q6L9W6 998 aa25.7■■□□□ 1.71
CHPF-201ENST00000243776 ERICH6Q7L0X2 663 aa25.69■■□□□ 1.7
CHPF-201ENST00000243776 L3MBTL2Q969R5 705 aa25.69■■□□□ 1.7
CHPF-201ENST00000243776 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
CHPF-201ENST00000243776 MYOM3Q5VTT5 1437 aa25.67■■□□□ 1.7
CHPF-201ENST00000243776 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
CHPF-201ENST00000243776 MRS2Q9HD23 443 aa25.67■■□□□ 1.7
CHPF-201ENST00000243776 EFCAB5A4FU69 1503 aa25.67■■□□□ 1.7
CHPF-201ENST00000243776 POLR3GLQ9BT43 218 aa25.66■■□□□ 1.7
CHPF-201ENST00000243776 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
CHPF-201ENST00000243776 KDM5BQ9UGL1 1544 aa25.63■■□□□ 1.69
CHPF-201ENST00000243776 MPHOSPH9Q99550 1183 aa25.63■■□□□ 1.69
CHPF-201ENST00000243776 CC2D2AQ9P2K1 1620 aa25.62■■□□□ 1.69
CHPF-201ENST00000243776 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.69
CHPF-201ENST00000243776 PRKRIP1Q9H875 184 aaPredicted RBP25.58■■□□□ 1.69
CHPF-201ENST00000243776 NBPF8Q3BBV2 869 aa25.56■■□□□ 1.68
CHPF-201ENST00000243776 LRRIQ1Q96JM4 1722 aa25.56■■□□□ 1.68
CHPF-201ENST00000243776 PPP4R2Q9NY27 417 aa25.56■■□□□ 1.68
CHPF-201ENST00000243776 CTTNBP2Q8WZ74 1663 aa25.55■■□□□ 1.68
CHPF-201ENST00000243776 DENND4BO75064 1496 aaPredicted RBP25.54■■□□□ 1.68
CHPF-201ENST00000243776 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
CHPF-201ENST00000243776 KDM6BO15054 1643 aa25.53■■□□□ 1.68
CHPF-201ENST00000243776 MAGI3Q5TCQ9 1506 aa25.51■■□□□ 1.67
CHPF-201ENST00000243776 FANCIQ9NVI1 1328 aa25.51■■□□□ 1.67
CHPF-201ENST00000243776 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
CHPF-201ENST00000243776 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
CHPF-201ENST00000243776 CCDC7Q96M83 1385 aa25.49■■□□□ 1.67
CHPF-201ENST00000243776 CUL7Q14999 1698 aa25.47■■□□□ 1.67
CHPF-201ENST00000243776 DNAJC5BQ9UF47 199 aa25.47■■□□□ 1.67
CHPF-201ENST00000243776 ZNF644Q9H582 1327 aaPredicted RBP25.47■■□□□ 1.67
CHPF-201ENST00000243776 SUPT6HQ7KZ85 1726 aaKnown RBP25.46■■□□□ 1.67
CHPF-201ENST00000243776 GAPVD1Q14C86 1478 aa25.44■■□□□ 1.66
CHPF-201ENST00000243776 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
CHPF-201ENST00000243776 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
CHPF-201ENST00000243776 KIF7Q2M1P5 1343 aa25.43■■□□□ 1.66
CHPF-201ENST00000243776 UGGT2Q9NYU1 1516 aa25.41■■□□□ 1.66
CHPF-201ENST00000243776 EHBP1L1Q8N3D4 1523 aa25.4■■□□□ 1.66
CHPF-201ENST00000243776 CDK13Q14004 1512 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms