RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.16
PCDHB8-201ENST00000239444 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
PCDHB8-201ENST00000239444 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
PCDHB8-201ENST00000239444 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
PCDHB8-201ENST00000239444 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
PCDHB8-201ENST00000239444 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
PCDHB8-201ENST00000239444 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
PCDHB8-201ENST00000239444 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
PCDHB8-201ENST00000239444 P3H3Q8IVL6 736 aa22.22■■□□□ 1.15
PCDHB8-201ENST00000239444 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
PCDHB8-201ENST00000239444 CUL7Q14999 1698 aa22.18■■□□□ 1.14
PCDHB8-201ENST00000239444 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
PCDHB8-201ENST00000239444 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
PCDHB8-201ENST00000239444 MAP3K1Q13233 1512 aa22.18■■□□□ 1.14
PCDHB8-201ENST00000239444 MAPKBP1O60336 1514 aa22.17■■□□□ 1.14
PCDHB8-201ENST00000239444 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
PCDHB8-201ENST00000239444 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
PCDHB8-201ENST00000239444 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
PCDHB8-201ENST00000239444 PHLDB1Q86UU1 1377 aa22.13■■□□□ 1.13
PCDHB8-201ENST00000239444 HIRIP3Q9BW71 556 aaPredicted RBP22.13■■□□□ 1.13
PCDHB8-201ENST00000239444 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
PCDHB8-201ENST00000239444 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
PCDHB8-201ENST00000239444 CTTNBP2Q8WZ74 1663 aa22.09■■□□□ 1.13
PCDHB8-201ENST00000239444 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.13
PCDHB8-201ENST00000239444 KIF21AQ7Z4S6 1674 aa22.08■■□□□ 1.13
PCDHB8-201ENST00000239444 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
PCDHB8-201ENST00000239444 BCANQ96GW7 911 aa22.07■■□□□ 1.12
PCDHB8-201ENST00000239444 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
PCDHB8-201ENST00000239444 LRRC9Q6ZRR7 1453 aa22.06■■□□□ 1.12
PCDHB8-201ENST00000239444 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
PCDHB8-201ENST00000239444 CFAP43Q8NDM7 1665 aa22.05■■□□□ 1.12
PCDHB8-201ENST00000239444 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
PCDHB8-201ENST00000239444 TDRD9Q8NDG6 1382 aaKnown RBP22.03■■□□□ 1.12
PCDHB8-201ENST00000239444 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
PCDHB8-201ENST00000239444 TSHZ2Q9NRE2 1034 aa21.99■■□□□ 1.11
PCDHB8-201ENST00000239444 FYCO1Q9BQS8 1478 aa21.98■■□□□ 1.11
PCDHB8-201ENST00000239444 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.11
PCDHB8-201ENST00000239444 TARBP1Q13395 1621 aaKnown RBP21.96■■□□□ 1.11
PCDHB8-201ENST00000239444 CASKIN1Q8WXD9 1431 aa21.95■■□□□ 1.1
PCDHB8-201ENST00000239444 SAMD9Q5K651 1589 aa21.9■■□□□ 1.1
PCDHB8-201ENST00000239444 FMN1Q68DA7 1419 aa21.9■■□□□ 1.1
PCDHB8-201ENST00000239444 FKBP8Q14318 412 aa21.89■■□□□ 1.1
PCDHB8-201ENST00000239444 TRIM52Q96A61 297 aa21.88■■□□□ 1.09
PCDHB8-201ENST00000239444 PPP1R15AO75807 674 aaPredicted RBP21.87■■□□□ 1.09
PCDHB8-201ENST00000239444 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
PCDHB8-201ENST00000239444 PBRM1Q86U86 1689 aa21.83■■□□□ 1.08
PCDHB8-201ENST00000239444 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
PCDHB8-201ENST00000239444 LRRIQ1Q96JM4 1722 aa21.79■■□□□ 1.08
PCDHB8-201ENST00000239444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.76■■□□□ 1.07
PCDHB8-201ENST00000239444 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
PCDHB8-201ENST00000239444 ANP32CO43423 234 aa21.74■■□□□ 1.07
PCDHB8-201ENST00000239444 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
PCDHB8-201ENST00000239444 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
PCDHB8-201ENST00000239444 PTPRKQ15262 1439 aa21.73■■□□□ 1.07
PCDHB8-201ENST00000239444 TONSLQ96HA7 1378 aa21.72■■□□□ 1.07
PCDHB8-201ENST00000239444 ARID3CA6NKF2 412 aa21.71■■□□□ 1.07
PCDHB8-201ENST00000239444 FGD6Q6ZV73 1430 aa21.71■■□□□ 1.07
PCDHB8-201ENST00000239444 MTUS2Q5JR59 1369 aa21.71■■□□□ 1.07
PCDHB8-201ENST00000239444 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
PCDHB8-201ENST00000239444 IQGAP2Q13576 1575 aa21.68■■□□□ 1.06
PCDHB8-201ENST00000239444 TIMELESSQ9UNS1 1208 aa21.67■■□□□ 1.06
PCDHB8-201ENST00000239444 WDR62O43379 1518 aa21.67■■□□□ 1.06
PCDHB8-201ENST00000239444 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
PCDHB8-201ENST00000239444 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.05
PCDHB8-201ENST00000239444 NEFLP07196 543 aa21.64■■□□□ 1.05
PCDHB8-201ENST00000239444 NCOA2Q15596 1464 aa21.63■■□□□ 1.05
PCDHB8-201ENST00000239444 EHBP1L1Q8N3D4 1523 aa21.63■■□□□ 1.05
PCDHB8-201ENST00000239444 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
PCDHB8-201ENST00000239444 BCL11AQ9H165 835 aa21.63■■□□□ 1.05
PCDHB8-201ENST00000239444 SUPT6HQ7KZ85 1726 aaKnown RBP21.62■■□□□ 1.05
PCDHB8-201ENST00000239444 ANP32EQ9BTT0 268 aa21.61■■□□□ 1.05
PCDHB8-201ENST00000239444 CHIC2Q9UKJ5 165 aa21.61■■□□□ 1.05
PCDHB8-201ENST00000239444 RRP7BPQ9NSQ0 103 aa21.6■■□□□ 1.05
PCDHB8-201ENST00000239444 MYOM3Q5VTT5 1437 aa21.59■■□□□ 1.05
PCDHB8-201ENST00000239444 MAGI3Q5TCQ9 1506 aa21.59■■□□□ 1.05
PCDHB8-201ENST00000239444 PTPN23Q9H3S7 1636 aa21.59■■□□□ 1.05
PCDHB8-201ENST00000239444 HECW1Q76N89 1606 aa21.58■■□□□ 1.05
PCDHB8-201ENST00000239444 HFM1A2PYH4 1435 aa21.58■■□□□ 1.04
PCDHB8-201ENST00000239444 IRX6P78412 446 aaPredicted RBP21.57■■□□□ 1.04
PCDHB8-201ENST00000239444 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
PCDHB8-201ENST00000239444 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
PCDHB8-201ENST00000239444 UGGT2Q9NYU1 1516 aa21.57■■□□□ 1.04
PCDHB8-201ENST00000239444 NAIPQ13075 1403 aa21.56■■□□□ 1.04
PCDHB8-201ENST00000239444 RBM19Q9Y4C8 960 aaKnown RBP21.54■■□□□ 1.04
PCDHB8-201ENST00000239444 HNRNPUQ00839 825 aaKnown RBP eCLIP21.53■■□□□ 1.04
PCDHB8-201ENST00000239444 EPRSP07814 1512 aaKnown RBP21.52■■□□□ 1.04
PCDHB8-201ENST00000239444 EIF4G3O43432 1585 aaKnown RBP21.52■■□□□ 1.04
PCDHB8-201ENST00000239444 KIAA0586Q9BVV6 1533 aa21.5■■□□□ 1.03
PCDHB8-201ENST00000239444 KDM5BQ9UGL1 1544 aa21.49■■□□□ 1.03
PCDHB8-201ENST00000239444 FOXD1Q16676 465 aa21.49■■□□□ 1.03
PCDHB8-201ENST00000239444 HSPA5P11021 654 aaKnown RBP21.48■■□□□ 1.03
PCDHB8-201ENST00000239444 ERCC6Q03468 1493 aa21.47■■□□□ 1.03
PCDHB8-201ENST00000239444 CDK13Q14004 1512 aaKnown RBP21.47■■□□□ 1.03
PCDHB8-201ENST00000239444 WASHC2AQ641Q2 1341 aa21.47■■□□□ 1.03
PCDHB8-201ENST00000239444 GRIN2AQ12879 1464 aa21.46■■□□□ 1.03
PCDHB8-201ENST00000239444 KIAA0556O60303 1618 aa21.45■■□□□ 1.03
PCDHB8-201ENST00000239444 DISP1Q96F81 1524 aa21.45■■□□□ 1.02
PCDHB8-201ENST00000239444 CCDC184Q52MB2 194 aa21.45■■□□□ 1.02
PCDHB8-201ENST00000239444 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.02
PCDHB8-201ENST00000239444 KDM6BO15054 1643 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms