RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 NISCHQ9Y2I1 1504 aa31.71■■■□□ 2.67
PCDHB8-201ENST00000239444 CCDC180Q9P1Z9 1646 aa27.18■■□□□ 1.94
PCDHB8-201ENST00000239444 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
PCDHB8-201ENST00000239444 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
PCDHB8-201ENST00000239444 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.86
PCDHB8-201ENST00000239444 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
PCDHB8-201ENST00000239444 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
PCDHB8-201ENST00000239444 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
PCDHB8-201ENST00000239444 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
PCDHB8-201ENST00000239444 HRCP23327 699 aa25.55■■□□□ 1.68
PCDHB8-201ENST00000239444 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
PCDHB8-201ENST00000239444 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
PCDHB8-201ENST00000239444 PPARGC1BQ86YN6 1023 aaKnown RBP25.28■■□□□ 1.64
PCDHB8-201ENST00000239444 SCRIBQ14160 1630 aa25.28■■□□□ 1.64
PCDHB8-201ENST00000239444 ABCC9O60706 1549 aa25.22■■□□□ 1.63
PCDHB8-201ENST00000239444 NACADO15069 1562 aa25.15■■□□□ 1.62
PCDHB8-201ENST00000239444 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
PCDHB8-201ENST00000239444 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
PCDHB8-201ENST00000239444 TRIM26Q12899 539 aaPredicted RBP24.73■■□□□ 1.55
PCDHB8-201ENST00000239444 FAM9AQ8IZU1 332 aaPredicted RBP24.69■■□□□ 1.54
PCDHB8-201ENST00000239444 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
PCDHB8-201ENST00000239444 EHMT2Q96KQ7 1210 aa24.68■■□□□ 1.54
PCDHB8-201ENST00000239444 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
PCDHB8-201ENST00000239444 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
PCDHB8-201ENST00000239444 WIZO95785 1651 aa24.46■■□□□ 1.51
PCDHB8-201ENST00000239444 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
PCDHB8-201ENST00000239444 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.49
PCDHB8-201ENST00000239444 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
PCDHB8-201ENST00000239444 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
PCDHB8-201ENST00000239444 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
PCDHB8-201ENST00000239444 BICRAQ9NZM4 1560 aa24.11■■□□□ 1.45
PCDHB8-201ENST00000239444 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
PCDHB8-201ENST00000239444 PABPN1Q86U42 306 aaKnown RBP eCLIP23.99■■□□□ 1.43
PCDHB8-201ENST00000239444 SMARCA2P51531 1590 aa23.96■■□□□ 1.43
PCDHB8-201ENST00000239444 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
PCDHB8-201ENST00000239444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.94■■□□□ 1.42
PCDHB8-201ENST00000239444 TTBK1Q5TCY1 1321 aaPredicted RBP23.92■■□□□ 1.42
PCDHB8-201ENST00000239444 SCAF1Q9H7N4 1312 aaKnown RBP23.86■■□□□ 1.41
PCDHB8-201ENST00000239444 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
PCDHB8-201ENST00000239444 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
PCDHB8-201ENST00000239444 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
PCDHB8-201ENST00000239444 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
PCDHB8-201ENST00000239444 ATAD2BQ9ULI0 1458 aa23.63■■□□□ 1.37
PCDHB8-201ENST00000239444 SOGA1O94964 1423 aa23.59■■□□□ 1.37
PCDHB8-201ENST00000239444 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
PCDHB8-201ENST00000239444 BAZ1BQ9UIG0 1483 aaKnown RBP23.53■■□□□ 1.36
PCDHB8-201ENST00000239444 RUSC2Q8N2Y8 1516 aa23.51■■□□□ 1.35
PCDHB8-201ENST00000239444 NEUROD1Q13562 356 aa23.49■■□□□ 1.35
PCDHB8-201ENST00000239444 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
PCDHB8-201ENST00000239444 DIEXFQ68CQ4 756 aaKnown RBP23.45■■□□□ 1.34
PCDHB8-201ENST00000239444 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
PCDHB8-201ENST00000239444 EEA1Q15075 1411 aa23.41■■□□□ 1.34
PCDHB8-201ENST00000239444 ACIN1Q9UKV3 1341 aaKnown RBP23.41■■□□□ 1.34
PCDHB8-201ENST00000239444 CSRNP3Q8WYN3 585 aa23.39■■□□□ 1.33
PCDHB8-201ENST00000239444 TNIKQ9UKE5 1360 aa23.36■■□□□ 1.33
PCDHB8-201ENST00000239444 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
PCDHB8-201ENST00000239444 GTF3C3Q9Y5Q9 886 aa23.26■■□□□ 1.31
PCDHB8-201ENST00000239444 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
PCDHB8-201ENST00000239444 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
PCDHB8-201ENST00000239444 HNRNPUL2Q1KMD3 747 aaKnown RBP23.22■■□□□ 1.31
PCDHB8-201ENST00000239444 GOLGA3Q08378 1498 aa23.2■■□□□ 1.3
PCDHB8-201ENST00000239444 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
PCDHB8-201ENST00000239444 CENPBP07199 599 aaPredicted RBP23.14■■□□□ 1.3
PCDHB8-201ENST00000239444 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
PCDHB8-201ENST00000239444 TOP2BQ02880 1626 aa23.13■■□□□ 1.29
PCDHB8-201ENST00000239444 ZNF316A6NFI3 1004 aaPredicted RBP23.12■■□□□ 1.29
PCDHB8-201ENST00000239444 KIF21BO75037 1637 aa23.12■■□□□ 1.29
PCDHB8-201ENST00000239444 CEP164Q9UPV0 1460 aa23.1■■□□□ 1.29
PCDHB8-201ENST00000239444 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.28
PCDHB8-201ENST00000239444 CLIP1P30622 1438 aa23.02■■□□□ 1.28
PCDHB8-201ENST00000239444 CFTRP13569 1480 aa22.98■■□□□ 1.27
PCDHB8-201ENST00000239444 MIER1Q8N108 512 aa22.97■■□□□ 1.27
PCDHB8-201ENST00000239444 RAPGEF2Q9Y4G8 1499 aa22.95■■□□□ 1.26
PCDHB8-201ENST00000239444 CUX1P39880 1505 aa22.93■■□□□ 1.26
PCDHB8-201ENST00000239444 MYT1Q01538 1121 aa22.92■■□□□ 1.26
PCDHB8-201ENST00000239444 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
PCDHB8-201ENST00000239444 APLP2Q06481 763 aa22.89■■□□□ 1.26
PCDHB8-201ENST00000239444 PRDM2Q13029 1718 aa22.86■■□□□ 1.25
PCDHB8-201ENST00000239444 PRXQ9BXM0 1461 aa22.81■■□□□ 1.24
PCDHB8-201ENST00000239444 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
PCDHB8-201ENST00000239444 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
PCDHB8-201ENST00000239444 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
PCDHB8-201ENST00000239444 KIF27Q86VH2 1401 aa22.74■■□□□ 1.23
PCDHB8-201ENST00000239444 KANK4Q5T7N3 995 aaPredicted RBP22.7■■□□□ 1.22
PCDHB8-201ENST00000239444 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
PCDHB8-201ENST00000239444 DHX57Q6P158 1386 aaKnown RBP22.6■■□□□ 1.21
PCDHB8-201ENST00000239444 ITGAEP38570 1179 aa22.56■■□□□ 1.2
PCDHB8-201ENST00000239444 CUX2O14529 1486 aa22.56■■□□□ 1.2
PCDHB8-201ENST00000239444 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
PCDHB8-201ENST00000239444 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.19
PCDHB8-201ENST00000239444 IGF1RP08069 1367 aa22.51■■□□□ 1.19
PCDHB8-201ENST00000239444 ARHGAP35Q9NRY4 1499 aa22.43■■□□□ 1.18
PCDHB8-201ENST00000239444 DNMBPQ6XZF7 1577 aa22.41■■□□□ 1.18
PCDHB8-201ENST00000239444 NESP48681 1621 aa22.4■■□□□ 1.18
PCDHB8-201ENST00000239444 CARMIL1Q5VZK9 1371 aa22.4■■□□□ 1.18
PCDHB8-201ENST00000239444 CLSPNQ9HAW4 1339 aa22.39■■□□□ 1.17
PCDHB8-201ENST00000239444 RRBP1Q9P2E9 1410 aaKnown RBP22.37■■□□□ 1.17
PCDHB8-201ENST00000239444 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
PCDHB8-201ENST00000239444 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
PCDHB8-201ENST00000239444 CCNB3Q8WWL7 1395 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms