RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 CCDC136Q96JN2 1154 aa9.92□□□□□ -0.82
PRDM2-201ENST00000235372 L1TD1Q5T7N2 865 aaKnown RBP9.91□□□□□ -0.82
PRDM2-201ENST00000235372 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
PRDM2-201ENST00000235372 NRDCO43847 1150 aa9.91□□□□□ -0.82
PRDM2-201ENST00000235372 TMC1Q8TDI8 760 aa9.91□□□□□ -0.82
PRDM2-201ENST00000235372 FAM9BQ8IZU0 186 aa9.89□□□□□ -0.83
PRDM2-201ENST00000235372 FKBP8Q14318 412 aa9.89□□□□□ -0.83
PRDM2-201ENST00000235372 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
PRDM2-201ENST00000235372 KRI1Q8N9T8 703 aaKnown RBP9.88□□□□□ -0.83
PRDM2-201ENST00000235372 HNRNPUQ00839 825 aaKnown RBP eCLIP9.87□□□□□ -0.83
PRDM2-201ENST00000235372 TONSLQ96HA7 1378 aa9.87□□□□□ -0.83
PRDM2-201ENST00000235372 PPP1R15AO75807 674 aaPredicted RBP9.86□□□□□ -0.83
PRDM2-201ENST00000235372 KIAA2012Q0VF49 1180 aa9.86□□□□□ -0.83
PRDM2-201ENST00000235372 SENP3Q9H4L4 574 aaPredicted RBP9.86□□□□□ -0.83
PRDM2-201ENST00000235372 ARID4BQ4LE39 1312 aaPredicted RBP9.86□□□□□ -0.83
PRDM2-201ENST00000235372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.85□□□□□ -0.83
PRDM2-201ENST00000235372 FGD1P98174 961 aa9.85□□□□□ -0.83
PRDM2-201ENST00000235372 P3H3Q8IVL6 736 aa9.85□□□□□ -0.83
PRDM2-201ENST00000235372 NOC3LQ8WTT2 800 aaKnown RBP9.84□□□□□ -0.83
PRDM2-201ENST00000235372 PLCB2Q00722 1185 aa9.83□□□□□ -0.84
PRDM2-201ENST00000235372 ISY1Q9ULR0 285 aaKnown RBP9.83□□□□□ -0.84
PRDM2-201ENST00000235372 NAP1L2Q9ULW6 460 aaPredicted RBP9.82□□□□□ -0.84
PRDM2-201ENST00000235372 CHAF1AQ13111 956 aaPredicted RBP9.82□□□□□ -0.84
PRDM2-201ENST00000235372 ARID3AQ99856 593 aa9.82□□□□□ -0.84
PRDM2-201ENST00000235372 PNNQ9H307 717 aaKnown RBP9.82□□□□□ -0.84
PRDM2-201ENST00000235372 EIF4G2P78344 907 aaKnown RBP eCLIP9.8□□□□□ -0.84
PRDM2-201ENST00000235372 SENP3-EIF4A1A0A087X0R7 540 aa9.8□□□□□ -0.84
PRDM2-201ENST00000235372 IRX6P78412 446 aaPredicted RBP9.79□□□□□ -0.84
PRDM2-201ENST00000235372 OS9Q13438 667 aaPredicted RBP9.79□□□□□ -0.84
PRDM2-201ENST00000235372 KCNJ4P48050 445 aa9.78□□□□□ -0.84
PRDM2-201ENST00000235372 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
PRDM2-201ENST00000235372 NAP1L5Q96NT1 182 aaPredicted RBP9.77□□□□□ -0.85
PRDM2-201ENST00000235372 GOLGA6L4A6NEF3 574 aa9.77□□□□□ -0.85
PRDM2-201ENST00000235372 CFAP53Q96M91 514 aa9.76□□□□□ -0.85
PRDM2-201ENST00000235372 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
PRDM2-201ENST00000235372 TMX4Q9H1E5 349 aaPredicted RBP9.76□□□□□ -0.85
PRDM2-201ENST00000235372 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
PRDM2-201ENST00000235372 KDM2AQ9Y2K7 1162 aa9.75□□□□□ -0.85
PRDM2-201ENST00000235372 LMOD2Q6P5Q4 547 aa9.75□□□□□ -0.85
PRDM2-201ENST00000235372 GNL2Q13823 731 aaKnown RBP9.74□□□□□ -0.85
PRDM2-201ENST00000235372 DRC7Q8IY82 874 aa9.74□□□□□ -0.85
PRDM2-201ENST00000235372 A0A0U1RQG5 324 aaPredicted RBP9.74□□□□□ -0.85
PRDM2-201ENST00000235372 ERICH6BQ5W0A0 696 aa9.74□□□□□ -0.85
PRDM2-201ENST00000235372 PDE4CQ08493 712 aa9.73□□□□□ -0.85
PRDM2-201ENST00000235372 PPM1GO15355 546 aaPredicted RBP9.73□□□□□ -0.85
PRDM2-201ENST00000235372 PABPN1Q86U42 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
PRDM2-201ENST00000235372 CHMP4BQ9H444 224 aaKnown RBP9.72□□□□□ -0.85
PRDM2-201ENST00000235372 ACIN1Q9UKV3 1341 aaKnown RBP9.72□□□□□ -0.85
PRDM2-201ENST00000235372 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
PRDM2-201ENST00000235372 HSP90AB1P08238 724 aaKnown RBP9.71□□□□□ -0.85
PRDM2-201ENST00000235372 TSPY4P0CV99 314 aa9.71□□□□□ -0.86
PRDM2-201ENST00000235372 TSPY10P0CW01 314 aa9.71□□□□□ -0.86
PRDM2-201ENST00000235372 MRS2Q9HD23 443 aa9.71□□□□□ -0.86
PRDM2-201ENST00000235372 DDX10Q13206 875 aaKnown RBP9.69□□□□□ -0.86
PRDM2-201ENST00000235372 MAPK8IP3Q9UPT6 1336 aa9.68□□□□□ -0.86
PRDM2-201ENST00000235372 ABCC9O60706 1549 aa9.68□□□□□ -0.86
PRDM2-201ENST00000235372 MCCP23508 829 aa9.67□□□□□ -0.86
PRDM2-201ENST00000235372 USP35Q9P2H5 1018 aa9.67□□□□□ -0.86
PRDM2-201ENST00000235372 CEP89Q96ST8 783 aa9.67□□□□□ -0.86
PRDM2-201ENST00000235372 MSNP26038 577 aaKnown RBP9.67□□□□□ -0.86
PRDM2-201ENST00000235372 GOLGA6L1Q8N7Z2 621 aa9.66□□□□□ -0.86
PRDM2-201ENST00000235372 CDCA8Q53HL2 280 aa9.65□□□□□ -0.86
PRDM2-201ENST00000235372 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
PRDM2-201ENST00000235372 TNNT3P45378 269 aaPredicted RBP9.64□□□□□ -0.87
PRDM2-201ENST00000235372 G3V3G9 751 aa9.63□□□□□ -0.87
PRDM2-201ENST00000235372 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
PRDM2-201ENST00000235372 CHIC2Q9UKJ5 165 aa9.63□□□□□ -0.87
PRDM2-201ENST00000235372 MS4A1P11836 297 aa9.63□□□□□ -0.87
PRDM2-201ENST00000235372 TPM4P67936 248 aa9.62□□□□□ -0.87
PRDM2-201ENST00000235372 KNSTRNQ9Y448 316 aa9.62□□□□□ -0.87
PRDM2-201ENST00000235372 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.61□□□□□ -0.87
PRDM2-201ENST00000235372 CCDC34Q96HJ3 373 aa9.61□□□□□ -0.87
PRDM2-201ENST00000235372 CNKSR2Q8WXI2 1034 aa9.61□□□□□ -0.87
PRDM2-201ENST00000235372 CFAP44Q96MT7 982 aa9.61□□□□□ -0.87
PRDM2-201ENST00000235372 HSCBQ8IWL3 235 aa9.6□□□□□ -0.87
PRDM2-201ENST00000235372 POGKQ9P215 609 aa9.6□□□□□ -0.87
PRDM2-201ENST00000235372 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
PRDM2-201ENST00000235372 HTATSF1O43719 755 aaKnown RBP9.59□□□□□ -0.87
PRDM2-201ENST00000235372 SETQ01105 290 aaPredicted RBP9.59□□□□□ -0.87
PRDM2-201ENST00000235372 KIAA1211Q6ZU35 1233 aa9.58□□□□□ -0.88
PRDM2-201ENST00000235372 VPS53Q5VIR6 699 aa9.57□□□□□ -0.88
PRDM2-201ENST00000235372 RASSF8Q8NHQ8 419 aa9.56□□□□□ -0.88
PRDM2-201ENST00000235372 NEUROD2Q15784 382 aa9.56□□□□□ -0.88
PRDM2-201ENST00000235372 FRAT1Q92837 279 aaPredicted RBP9.55□□□□□ -0.88
PRDM2-201ENST00000235372 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
PRDM2-201ENST00000235372 PTMSP20962 102 aa9.53□□□□□ -0.88
PRDM2-201ENST00000235372 KCNH8Q96L42 1107 aa9.53□□□□□ -0.88
PRDM2-201ENST00000235372 RTF1Q92541 710 aaKnown RBP9.53□□□□□ -0.88
PRDM2-201ENST00000235372 MARCH6O60337 910 aa9.53□□□□□ -0.88
PRDM2-201ENST00000235372 SPRYD3Q8NCJ5 442 aa9.53□□□□□ -0.88
PRDM2-201ENST00000235372 HDGFP51858 240 aaKnown RBP9.53□□□□□ -0.88
PRDM2-201ENST00000235372 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
PRDM2-201ENST00000235372 CREBRFQ8IUR6 639 aa9.53□□□□□ -0.88
PRDM2-201ENST00000235372 U2SURPO15042 1029 aaKnown RBP9.52□□□□□ -0.88
PRDM2-201ENST00000235372 TPM3P06753 285 aa9.52□□□□□ -0.88
PRDM2-201ENST00000235372 HSP90B1P14625 803 aaKnown RBP9.52□□□□□ -0.88
PRDM2-201ENST00000235372 TCEAL9Q9UHQ7 104 aa9.52□□□□□ -0.89
PRDM2-201ENST00000235372 RGS3P49796 1198 aa9.52□□□□□ -0.89
PRDM2-201ENST00000235372 MTUS2Q5JR59 1369 aa9.52□□□□□ -0.89
PRDM2-201ENST00000235372 GORABQ5T7V8 394 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms