RNA–Protein interactions for RNA: ENST00000228825.11

ARPC3-201, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC3, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-201ENST00000228825 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
ARPC3-201ENST00000228825 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
ARPC3-201ENST00000228825 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
ARPC3-201ENST00000228825 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
ARPC3-201ENST00000228825 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
ARPC3-201ENST00000228825 AQRO60306 1485 aaKnown RBP eCLIP17.28■□□□□ 0.363e-6■■□□□ 12.3
ARPC3-201ENST00000228825 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
ARPC3-201ENST00000228825 GAPVD1Q14C86 1478 aa17.22■□□□□ 0.35
ARPC3-201ENST00000228825 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
ARPC3-201ENST00000228825 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
ARPC3-201ENST00000228825 PBRM1Q86U86 1689 aa17.18■□□□□ 0.34
ARPC3-201ENST00000228825 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
ARPC3-201ENST00000228825 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
ARPC3-201ENST00000228825 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
ARPC3-201ENST00000228825 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
ARPC3-201ENST00000228825 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
ARPC3-201ENST00000228825 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
ARPC3-201ENST00000228825 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
ARPC3-201ENST00000228825 CHD1O14646 1710 aa17.1■□□□□ 0.33
ARPC3-201ENST00000228825 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
ARPC3-201ENST00000228825 MYCNP04198 464 aaPredicted RBP17.07■□□□□ 0.32
ARPC3-201ENST00000228825 FBLN2P98095 1184 aa17.07■□□□□ 0.32
ARPC3-201ENST00000228825 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
ARPC3-201ENST00000228825 POLA2Q14181 598 aa17.04■□□□□ 0.32
ARPC3-201ENST00000228825 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
ARPC3-201ENST00000228825 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
ARPC3-201ENST00000228825 CHRDL2Q6WN34 429 aa17.02■□□□□ 0.32
ARPC3-201ENST00000228825 IGF1RP08069 1367 aa17.01■□□□□ 0.31
ARPC3-201ENST00000228825 CUL7Q14999 1698 aa17■□□□□ 0.31
ARPC3-201ENST00000228825 GRIN2AQ12879 1464 aa16.98■□□□□ 0.31
ARPC3-201ENST00000228825 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
ARPC3-201ENST00000228825 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
ARPC3-201ENST00000228825 EEA1Q15075 1411 aa16.9■□□□□ 0.3
ARPC3-201ENST00000228825 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
ARPC3-201ENST00000228825 NUP160Q12769 1436 aa16.89■□□□□ 0.29
ARPC3-201ENST00000228825 CEP170Q5SW79 1584 aa16.86■□□□□ 0.29
ARPC3-201ENST00000228825 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
ARPC3-201ENST00000228825 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
ARPC3-201ENST00000228825 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
ARPC3-201ENST00000228825 PRXQ9BXM0 1461 aa16.8■□□□□ 0.28
ARPC3-201ENST00000228825 RIMBP3CA6NJZ7 1639 aa16.79■□□□□ 0.28
ARPC3-201ENST00000228825 RIMBP3BA6NNM3 1639 aa16.79■□□□□ 0.28
ARPC3-201ENST00000228825 RIMBP3Q9UFD9 1639 aa16.79■□□□□ 0.28
ARPC3-201ENST00000228825 KIAA0586Q9BVV6 1533 aa16.79■□□□□ 0.28
ARPC3-201ENST00000228825 SHROOM2Q13796 1616 aa16.77■□□□□ 0.27
ARPC3-201ENST00000228825 AKT1S1Q96B36 256 aa16.74■□□□□ 0.27
ARPC3-201ENST00000228825 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
ARPC3-201ENST00000228825 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
ARPC3-201ENST00000228825 IQGAP2Q13576 1575 aa16.7■□□□□ 0.26
ARPC3-201ENST00000228825 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
ARPC3-201ENST00000228825 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
ARPC3-201ENST00000228825 PRG4Q92954 1404 aaPredicted RBP16.69■□□□□ 0.26
ARPC3-201ENST00000228825 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
ARPC3-201ENST00000228825 KIF21BO75037 1637 aa16.68■□□□□ 0.26
ARPC3-201ENST00000228825 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
ARPC3-201ENST00000228825 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
ARPC3-201ENST00000228825 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
ARPC3-201ENST00000228825 ERCC6L2Q5T890 1561 aa16.63■□□□□ 0.25
ARPC3-201ENST00000228825 CARMIL2Q6F5E8 1435 aa16.62■□□□□ 0.25
ARPC3-201ENST00000228825 SP7Q8TDD2 431 aaPredicted RBP16.62■□□□□ 0.25
ARPC3-201ENST00000228825 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
ARPC3-201ENST00000228825 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
ARPC3-201ENST00000228825 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
ARPC3-201ENST00000228825 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
ARPC3-201ENST00000228825 DISP1Q96F81 1524 aa16.55■□□□□ 0.24
ARPC3-201ENST00000228825 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
ARPC3-201ENST00000228825 UBTFP17480 764 aaKnown RBP16.53■□□□□ 0.24
ARPC3-201ENST00000228825 PIP4P2Q8N4L2 257 aa16.52■□□□□ 0.24
ARPC3-201ENST00000228825 PTPRGP23470 1445 aa16.52■□□□□ 0.23
ARPC3-201ENST00000228825 KIAA0556O60303 1618 aa16.52■□□□□ 0.23
ARPC3-201ENST00000228825 EHMT2Q96KQ7 1210 aa16.46■□□□□ 0.23
ARPC3-201ENST00000228825 SAMD9Q5K651 1589 aa16.45■□□□□ 0.22
ARPC3-201ENST00000228825 EFCAB5A4FU69 1503 aa16.43■□□□□ 0.22
ARPC3-201ENST00000228825 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
ARPC3-201ENST00000228825 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
ARPC3-201ENST00000228825 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
ARPC3-201ENST00000228825 PITPNM1O00562 1244 aa16.4■□□□□ 0.22
ARPC3-201ENST00000228825 ADCY10Q96PN6 1610 aa16.4■□□□□ 0.22
ARPC3-201ENST00000228825 UHRF1BP1LA0JNW5 1464 aa16.4■□□□□ 0.22
ARPC3-201ENST00000228825 RANGAP1P46060 587 aaPredicted RBP16.39■□□□□ 0.21
ARPC3-201ENST00000228825 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
ARPC3-201ENST00000228825 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
ARPC3-201ENST00000228825 FXR2P51116 673 aaKnown RBP eCLIP16.36■□□□□ 0.21
ARPC3-201ENST00000228825 ABCA8O94911 1581 aa16.34■□□□□ 0.21
ARPC3-201ENST00000228825 FHOD3Q2V2M9 1422 aa16.33■□□□□ 0.2
ARPC3-201ENST00000228825 PLB1Q6P1J6 1458 aa16.32■□□□□ 0.2
ARPC3-201ENST00000228825 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
ARPC3-201ENST00000228825 MAPKBP1O60336 1514 aa16.31■□□□□ 0.2
ARPC3-201ENST00000228825 HAX1O00165 279 aa16.31■□□□□ 0.2
ARPC3-201ENST00000228825 KDM5BQ9UGL1 1544 aa16.3■□□□□ 0.2
ARPC3-201ENST00000228825 CLIP1P30622 1438 aa16.28■□□□□ 0.2
ARPC3-201ENST00000228825 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
ARPC3-201ENST00000228825 RAPGEF6Q8TEU7 1601 aa16.28■□□□□ 0.2
ARPC3-201ENST00000228825 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
ARPC3-201ENST00000228825 ZBTB22O15209 634 aa16.26■□□□□ 0.19
ARPC3-201ENST00000228825 ZCCHC11Q5TAX3 1644 aaKnown RBP16.26■□□□□ 0.19
ARPC3-201ENST00000228825 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
ARPC3-201ENST00000228825 ASXL2Q76L83 1435 aa16.22■□□□□ 0.19
ARPC3-201ENST00000228825 ABCC10Q5T3U5 1492 aa16.21■□□□□ 0.19
ARPC3-201ENST00000228825 KIF13AQ9H1H9 1805 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms