RNA–Protein interactions for RNA: ENST00000228825.11

ARPC3-201, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC3, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-201ENST00000228825 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
ARPC3-201ENST00000228825 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
ARPC3-201ENST00000228825 SENP3Q9H4L4 574 aaPredicted RBP25.9■■□□□ 1.74
ARPC3-201ENST00000228825 PHF23Q9BUL5 403 aaPredicted RBP25.48■■□□□ 1.67
ARPC3-201ENST00000228825 NISCHQ9Y2I1 1504 aa24.26■■□□□ 1.47
ARPC3-201ENST00000228825 FOXD1Q16676 465 aa24.19■■□□□ 1.46
ARPC3-201ENST00000228825 POTEDQ86YR6 584 aa23.02■■□□□ 1.28
ARPC3-201ENST00000228825 MSH5O43196 834 aa22.82■■□□□ 1.24
ARPC3-201ENST00000228825 PIAS4Q8N2W9 510 aaPredicted RBP22.48■■□□□ 1.19
ARPC3-201ENST00000228825 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
ARPC3-201ENST00000228825 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
ARPC3-201ENST00000228825 ADRA2BP18089 450 aa22.15■■□□□ 1.14
ARPC3-201ENST00000228825 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
ARPC3-201ENST00000228825 ABCC9O60706 1549 aa20.89■□□□□ 0.94
ARPC3-201ENST00000228825 MAPK8IP2Q13387 824 aaPredicted RBP20.48■□□□□ 0.87
ARPC3-201ENST00000228825 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
ARPC3-201ENST00000228825 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
ARPC3-201ENST00000228825 NACADO15069 1562 aa20.25■□□□□ 0.83
ARPC3-201ENST00000228825 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
ARPC3-201ENST00000228825 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
ARPC3-201ENST00000228825 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
ARPC3-201ENST00000228825 MYO15BQ96JP2 1530 aa20.18■□□□□ 0.82
ARPC3-201ENST00000228825 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
ARPC3-201ENST00000228825 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
ARPC3-201ENST00000228825 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
ARPC3-201ENST00000228825 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
ARPC3-201ENST00000228825 DCAF8L1A6NGE4 600 aa19.59■□□□□ 0.73
ARPC3-201ENST00000228825 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
ARPC3-201ENST00000228825 HOXD11P31277 338 aaPredicted RBP19.56■□□□□ 0.72
ARPC3-201ENST00000228825 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
ARPC3-201ENST00000228825 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
ARPC3-201ENST00000228825 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
ARPC3-201ENST00000228825 RNF39Q9H2S5 420 aa19.44■□□□□ 0.7
ARPC3-201ENST00000228825 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
ARPC3-201ENST00000228825 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
ARPC3-201ENST00000228825 C1QBPQ07021 282 aaKnown RBP19.12■□□□□ 0.65
ARPC3-201ENST00000228825 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
ARPC3-201ENST00000228825 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
ARPC3-201ENST00000228825 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
ARPC3-201ENST00000228825 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
ARPC3-201ENST00000228825 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
ARPC3-201ENST00000228825 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
ARPC3-201ENST00000228825 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
ARPC3-201ENST00000228825 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
ARPC3-201ENST00000228825 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
ARPC3-201ENST00000228825 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
ARPC3-201ENST00000228825 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
ARPC3-201ENST00000228825 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.58
ARPC3-201ENST00000228825 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
ARPC3-201ENST00000228825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.567e-7■□□□□ 11
ARPC3-201ENST00000228825 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
ARPC3-201ENST00000228825 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
ARPC3-201ENST00000228825 WIZO95785 1651 aa18.48■□□□□ 0.55
ARPC3-201ENST00000228825 NPM3O75607 178 aaKnown RBP18.43■□□□□ 0.54
ARPC3-201ENST00000228825 TOP2AP11388 1531 aaKnown RBP18.32■□□□□ 0.52
ARPC3-201ENST00000228825 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
ARPC3-201ENST00000228825 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
ARPC3-201ENST00000228825 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
ARPC3-201ENST00000228825 CADPSQ9ULU8 1353 aa18.11■□□□□ 0.49
ARPC3-201ENST00000228825 NESP48681 1621 aa18.11■□□□□ 0.49
ARPC3-201ENST00000228825 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
ARPC3-201ENST00000228825 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
ARPC3-201ENST00000228825 DSG3P32926 999 aa18.04■□□□□ 0.48
ARPC3-201ENST00000228825 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
ARPC3-201ENST00000228825 CFTRP13569 1480 aa18.03■□□□□ 0.48
ARPC3-201ENST00000228825 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
ARPC3-201ENST00000228825 CAPN15O75808 1086 aa18■□□□□ 0.47
ARPC3-201ENST00000228825 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
ARPC3-201ENST00000228825 POTEHQ6S545 545 aa17.95■□□□□ 0.46
ARPC3-201ENST00000228825 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
ARPC3-201ENST00000228825 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
ARPC3-201ENST00000228825 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
ARPC3-201ENST00000228825 THOC2Q8NI27 1593 aaKnown RBP17.84■□□□□ 0.45
ARPC3-201ENST00000228825 CUX2O14529 1486 aa17.83■□□□□ 0.45
ARPC3-201ENST00000228825 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
ARPC3-201ENST00000228825 WDR62O43379 1518 aa17.75■□□□□ 0.43
ARPC3-201ENST00000228825 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
ARPC3-201ENST00000228825 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
ARPC3-201ENST00000228825 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
ARPC3-201ENST00000228825 KCNA4P22459 653 aa17.68■□□□□ 0.42
ARPC3-201ENST00000228825 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
ARPC3-201ENST00000228825 APLP2Q06481 763 aa17.62■□□□□ 0.41
ARPC3-201ENST00000228825 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
ARPC3-201ENST00000228825 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
ARPC3-201ENST00000228825 TRHP20396 242 aaPredicted RBP17.59■□□□□ 0.41
ARPC3-201ENST00000228825 ABCB7O75027 752 aa17.54■□□□□ 0.4
ARPC3-201ENST00000228825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
ARPC3-201ENST00000228825 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
ARPC3-201ENST00000228825 CUX1P39880 1505 aa17.51■□□□□ 0.39
ARPC3-201ENST00000228825 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
ARPC3-201ENST00000228825 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
ARPC3-201ENST00000228825 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
ARPC3-201ENST00000228825 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
ARPC3-201ENST00000228825 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
ARPC3-201ENST00000228825 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
ARPC3-201ENST00000228825 SOGA1O94964 1423 aa17.42■□□□□ 0.38
ARPC3-201ENST00000228825 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
ARPC3-201ENST00000228825 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
ARPC3-201ENST00000228825 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
ARPC3-201ENST00000228825 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms