RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.43
EFNB3-201ENST00000226091 HMGXB3Q12766 1538 aa23.95■■□□□ 1.42
EFNB3-201ENST00000226091 FHOD3Q2V2M9 1422 aa23.93■■□□□ 1.42
EFNB3-201ENST00000226091 DDX10Q13206 875 aaKnown RBP23.92■■□□□ 1.42
EFNB3-201ENST00000226091 CHIC2Q9UKJ5 165 aa23.91■■□□□ 1.42
EFNB3-201ENST00000226091 RAB3GAP2Q9H2M9 1393 aa23.89■■□□□ 1.42
EFNB3-201ENST00000226091 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.42
EFNB3-201ENST00000226091 RRBP1Q9P2E9 1410 aaKnown RBP23.87■■□□□ 1.41
EFNB3-201ENST00000226091 CNGB1Q14028 1251 aaPredicted RBP23.85■■□□□ 1.41
EFNB3-201ENST00000226091 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
EFNB3-201ENST00000226091 PHLDB1Q86UU1 1377 aa23.84■■□□□ 1.41
EFNB3-201ENST00000226091 BCANQ96GW7 911 aa23.82■■□□□ 1.4
EFNB3-201ENST00000226091 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
EFNB3-201ENST00000226091 RRP7BPQ9NSQ0 103 aa23.75■■□□□ 1.39
EFNB3-201ENST00000226091 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
EFNB3-201ENST00000226091 FBLN2P98095 1184 aa23.7■■□□□ 1.38
EFNB3-201ENST00000226091 MTUS2Q5JR59 1369 aa23.68■■□□□ 1.38
EFNB3-201ENST00000226091 FOXD1Q16676 465 aa23.63■■□□□ 1.37
EFNB3-201ENST00000226091 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
EFNB3-201ENST00000226091 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
EFNB3-201ENST00000226091 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
EFNB3-201ENST00000226091 LRRC9Q6ZRR7 1453 aa23.6■■□□□ 1.37
EFNB3-201ENST00000226091 MAPKBP1O60336 1514 aa23.57■■□□□ 1.36
EFNB3-201ENST00000226091 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
EFNB3-201ENST00000226091 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
EFNB3-201ENST00000226091 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
EFNB3-201ENST00000226091 POLR3GLQ9BT43 218 aa23.53■■□□□ 1.36
EFNB3-201ENST00000226091 SENP3-EIF4A1A0A087X0R7 540 aa23.52■■□□□ 1.36
EFNB3-201ENST00000226091 ZNF777Q9ULD5 760 aaPredicted RBP23.5■■□□□ 1.35
EFNB3-201ENST00000226091 SUPT16HQ9Y5B9 1047 aaKnown RBP23.5■■□□□ 1.35
EFNB3-201ENST00000226091 PCF11O94913 1555 aaKnown RBP23.49■■□□□ 1.35
EFNB3-201ENST00000226091 BCL11AQ9H165 835 aa23.49■■□□□ 1.35
EFNB3-201ENST00000226091 TONSLQ96HA7 1378 aa23.48■■□□□ 1.35
EFNB3-201ENST00000226091 MAP3K1Q13233 1512 aa23.48■■□□□ 1.35
EFNB3-201ENST00000226091 ZNF326Q5BKZ1 582 aaKnown RBP23.45■■□□□ 1.34
EFNB3-201ENST00000226091 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
EFNB3-201ENST00000226091 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
EFNB3-201ENST00000226091 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
EFNB3-201ENST00000226091 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
EFNB3-201ENST00000226091 FKBP8Q14318 412 aa23.4■■□□□ 1.34
EFNB3-201ENST00000226091 ANP32CO43423 234 aa23.38■■□□□ 1.33
EFNB3-201ENST00000226091 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
EFNB3-201ENST00000226091 IRX6P78412 446 aaPredicted RBP23.37■■□□□ 1.33
EFNB3-201ENST00000226091 ZNF644Q9H582 1327 aaPredicted RBP23.35■■□□□ 1.33
EFNB3-201ENST00000226091 PTPRKQ15262 1439 aa23.34■■□□□ 1.33
EFNB3-201ENST00000226091 DNMBPQ6XZF7 1577 aa23.33■■□□□ 1.33
EFNB3-201ENST00000226091 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.33
EFNB3-201ENST00000226091 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
EFNB3-201ENST00000226091 FGD6Q6ZV73 1430 aa23.31■■□□□ 1.32
EFNB3-201ENST00000226091 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
EFNB3-201ENST00000226091 FMN1Q68DA7 1419 aa23.3■■□□□ 1.32
EFNB3-201ENST00000226091 CASKIN1Q8WXD9 1431 aa23.29■■□□□ 1.32
EFNB3-201ENST00000226091 FYCO1Q9BQS8 1478 aa23.26■■□□□ 1.31
EFNB3-201ENST00000226091 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
EFNB3-201ENST00000226091 NCOA2Q15596 1464 aa23.22■■□□□ 1.31
EFNB3-201ENST00000226091 HNRNPUQ00839 825 aaKnown RBP eCLIP23.21■■□□□ 1.31
EFNB3-201ENST00000226091 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
EFNB3-201ENST00000226091 EFCAB5A4FU69 1503 aa23.19■■□□□ 1.3
EFNB3-201ENST00000226091 FAM9BQ8IZU0 186 aa23.18■■□□□ 1.3
EFNB3-201ENST00000226091 NEFLP07196 543 aa23.18■■□□□ 1.3
EFNB3-201ENST00000226091 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
EFNB3-201ENST00000226091 SLC4A1APQ9BWU0 796 aaKnown RBP23.17■■□□□ 1.3
EFNB3-201ENST00000226091 TIMELESSQ9UNS1 1208 aa23.17■■□□□ 1.3
EFNB3-201ENST00000226091 L3MBTL2Q969R5 705 aa23.16■■□□□ 1.3
EFNB3-201ENST00000226091 ANP32EQ9BTT0 268 aa23.16■■□□□ 1.3
EFNB3-201ENST00000226091 CDK13Q14004 1512 aaKnown RBP23.15■■□□□ 1.3
EFNB3-201ENST00000226091 MPHOSPH9Q99550 1183 aa23.15■■□□□ 1.3
EFNB3-201ENST00000226091 TSHZ2Q9NRE2 1034 aa23.15■■□□□ 1.3
EFNB3-201ENST00000226091 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
EFNB3-201ENST00000226091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.13■■□□□ 1.29
EFNB3-201ENST00000226091 CTTNBP2Q8WZ74 1663 aa23.12■■□□□ 1.29
EFNB3-201ENST00000226091 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
EFNB3-201ENST00000226091 CUL7Q14999 1698 aa23.12■■□□□ 1.29
EFNB3-201ENST00000226091 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
EFNB3-201ENST00000226091 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
EFNB3-201ENST00000226091 NAIPQ13075 1403 aa23.09■■□□□ 1.29
EFNB3-201ENST00000226091 CCDC184Q52MB2 194 aa23.08■■□□□ 1.29
EFNB3-201ENST00000226091 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
EFNB3-201ENST00000226091 KIF21AQ7Z4S6 1674 aa23.05■■□□□ 1.28
EFNB3-201ENST00000226091 HFM1A2PYH4 1435 aa23.05■■□□□ 1.28
EFNB3-201ENST00000226091 C11orf95C9JLR9 678 aaPredicted RBP23.04■■□□□ 1.28
EFNB3-201ENST00000226091 EIF4G2P78344 907 aaKnown RBP eCLIP23.04■■□□□ 1.28
EFNB3-201ENST00000226091 UACAQ9BZF9 1416 aa23.03■■□□□ 1.28
EFNB3-201ENST00000226091 LRRIQ1Q96JM4 1722 aa23.02■■□□□ 1.28
EFNB3-201ENST00000226091 MAGI3Q5TCQ9 1506 aa23.02■■□□□ 1.27
EFNB3-201ENST00000226091 WASHC2AQ641Q2 1341 aa23■■□□□ 1.27
EFNB3-201ENST00000226091 PTPN23Q9H3S7 1636 aa23■■□□□ 1.27
EFNB3-201ENST00000226091 CCER2I3L3R5 266 aa22.99■■□□□ 1.27
EFNB3-201ENST00000226091 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
EFNB3-201ENST00000226091 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
EFNB3-201ENST00000226091 NBPF8Q3BBV2 869 aa22.98■■□□□ 1.27
EFNB3-201ENST00000226091 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
EFNB3-201ENST00000226091 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
EFNB3-201ENST00000226091 SAMD9Q5K651 1589 aa22.97■■□□□ 1.27
EFNB3-201ENST00000226091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.95■■□□□ 1.26
EFNB3-201ENST00000226091 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
EFNB3-201ENST00000226091 ABCA5Q8WWZ7 1642 aa22.94■■□□□ 1.26
EFNB3-201ENST00000226091 SALL2Q9Y467 1007 aaPredicted RBP22.93■■□□□ 1.26
EFNB3-201ENST00000226091 EPRSP07814 1512 aaKnown RBP22.92■■□□□ 1.26
EFNB3-201ENST00000226091 PRG4Q92954 1404 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms