RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 GOLGA3Q08378 1498 aa31.97■■■□□ 2.71
SNAPC2-201ENST00000221573 KIAA0586Q9BVV6 1533 aa31.92■■■□□ 2.7
SNAPC2-201ENST00000221573 IQGAP2Q13576 1575 aa31.88■■■□□ 2.69
SNAPC2-201ENST00000221573 SHROOM2Q13796 1616 aa31.85■■■□□ 2.69
SNAPC2-201ENST00000221573 UBTFP17480 764 aaKnown RBP31.8■■■□□ 2.68
SNAPC2-201ENST00000221573 JPH4Q96JJ6 628 aa31.74■■■□□ 2.67
SNAPC2-201ENST00000221573 LOC105371045A0A1W2PR82 267 aa31.71■■■□□ 2.67
SNAPC2-201ENST00000221573 ERCC6L2Q5T890 1561 aa31.71■■■□□ 2.67
SNAPC2-201ENST00000221573 DNAJC5Q9H3Z4 198 aa31.7■■■□□ 2.67
SNAPC2-201ENST00000221573 UGGT2Q9NYU1 1516 aa31.7■■■□□ 2.67
SNAPC2-201ENST00000221573 ARHGEF11O15085 1522 aa31.69■■■□□ 2.66
SNAPC2-201ENST00000221573 PRG4Q92954 1404 aaPredicted RBP31.68■■■□□ 2.66
SNAPC2-201ENST00000221573 RIMBP3CA6NJZ7 1639 aa31.66■■■□□ 2.66
SNAPC2-201ENST00000221573 RIMBP3BA6NNM3 1639 aa31.66■■■□□ 2.66
SNAPC2-201ENST00000221573 RIMBP3Q9UFD9 1639 aa31.66■■■□□ 2.66
SNAPC2-201ENST00000221573 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
SNAPC2-201ENST00000221573 DISP1Q96F81 1524 aa31.61■■■□□ 2.65
SNAPC2-201ENST00000221573 RANGAP1P46060 587 aaPredicted RBP31.6■■■□□ 2.65
SNAPC2-201ENST00000221573 KIAA0556O60303 1618 aa31.59■■■□□ 2.65
SNAPC2-201ENST00000221573 SAMD9Q5K651 1589 aa31.57■■■□□ 2.64
SNAPC2-201ENST00000221573 CARMIL2Q6F5E8 1435 aa31.54■■■□□ 2.64
SNAPC2-201ENST00000221573 EFCAB5A4FU69 1503 aa31.48■■■□□ 2.63
SNAPC2-201ENST00000221573 ARAP1Q96P48 1450 aa31.48■■■□□ 2.63
SNAPC2-201ENST00000221573 ARHGAP35Q9NRY4 1499 aa31.44■■■□□ 2.62
SNAPC2-201ENST00000221573 P3H3Q8IVL6 736 aa31.44■■■□□ 2.62
SNAPC2-201ENST00000221573 CEP162Q5TB80 1403 aa31.41■■■□□ 2.62
SNAPC2-201ENST00000221573 CLIP1P30622 1438 aa31.4■■■□□ 2.62
SNAPC2-201ENST00000221573 FHOD3Q2V2M9 1422 aa31.39■■■□□ 2.62
SNAPC2-201ENST00000221573 TTBK1Q5TCY1 1321 aaPredicted RBP31.38■■■□□ 2.61
SNAPC2-201ENST00000221573 PTPRGP23470 1445 aa31.34■■■□□ 2.61
SNAPC2-201ENST00000221573 CYB5RLQ6IPT4 315 aa31.3■■■□□ 2.6
SNAPC2-201ENST00000221573 PLB1Q6P1J6 1458 aa31.21■■■□□ 2.59
SNAPC2-201ENST00000221573 ADCY10Q96PN6 1610 aa31.19■■■□□ 2.58
SNAPC2-201ENST00000221573 ABCA8O94911 1581 aa31.19■■■□□ 2.58
SNAPC2-201ENST00000221573 UACAQ9BZF9 1416 aa31.16■■■□□ 2.58
SNAPC2-201ENST00000221573 RAPGEF6Q8TEU7 1601 aa31.15■■■□□ 2.58
SNAPC2-201ENST00000221573 FMN1Q68DA7 1419 aa31.15■■■□□ 2.58
SNAPC2-201ENST00000221573 ABCC2Q92887 1545 aa31.14■■■□□ 2.58
SNAPC2-201ENST00000221573 UHRF1BP1LA0JNW5 1464 aa31.11■■■□□ 2.57
SNAPC2-201ENST00000221573 PCF11O94913 1555 aaKnown RBP31.09■■■□□ 2.57
SNAPC2-201ENST00000221573 NUP153P49790 1475 aaKnown RBP31.02■■■□□ 2.56
SNAPC2-201ENST00000221573 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
SNAPC2-201ENST00000221573 LRRIQ1Q96JM4 1722 aa31■■■□□ 2.55
SNAPC2-201ENST00000221573 ZCCHC11Q5TAX3 1644 aaKnown RBP30.99■■■□□ 2.55
SNAPC2-201ENST00000221573 VPS8Q8N3P4 1428 aa30.98■■■□□ 2.55
SNAPC2-201ENST00000221573 CASKIN1Q8WXD9 1431 aa30.98■■■□□ 2.55
SNAPC2-201ENST00000221573 KDM5BQ9UGL1 1544 aa30.97■■■□□ 2.55
SNAPC2-201ENST00000221573 FYCO1Q9BQS8 1478 aa30.96■■■□□ 2.55
SNAPC2-201ENST00000221573 ARID3CA6NKF2 412 aa30.95■■■□□ 2.55
SNAPC2-201ENST00000221573 ATP1B4Q9UN42 357 aaPredicted RBP30.93■■■□□ 2.54
SNAPC2-201ENST00000221573 ATP10BO94823 1461 aa30.9■■■□□ 2.54
SNAPC2-201ENST00000221573 CDK13Q14004 1512 aaKnown RBP30.9■■■□□ 2.54
SNAPC2-201ENST00000221573 EPRSP07814 1512 aaKnown RBP30.88■■■□□ 2.53
SNAPC2-201ENST00000221573 NPM1P06748 294 aaKnown RBP eCLIP30.88■■■□□ 2.53
SNAPC2-201ENST00000221573 MAPKBP1O60336 1514 aa30.83■■■□□ 2.53
SNAPC2-201ENST00000221573 CCDC18Q5T9S5 1454 aa30.81■■■□□ 2.52
SNAPC2-201ENST00000221573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.79■■■□□ 2.52
SNAPC2-201ENST00000221573 HNRNPUL2Q1KMD3 747 aaKnown RBP30.79■■■□□ 2.52
SNAPC2-201ENST00000221573 ASXL2Q76L83 1435 aa30.78■■■□□ 2.52
SNAPC2-201ENST00000221573 CFAP43Q8NDM7 1665 aa30.76■■■□□ 2.51
SNAPC2-201ENST00000221573 WDR7Q9Y4E6 1490 aa30.71■■■□□ 2.51
SNAPC2-201ENST00000221573 TIAM1Q13009 1591 aa30.7■■■□□ 2.51
SNAPC2-201ENST00000221573 MAGI3Q5TCQ9 1506 aa30.67■■■□□ 2.5
SNAPC2-201ENST00000221573 DIP2BQ9P265 1576 aa30.63■■■□□ 2.49
SNAPC2-201ENST00000221573 KIF13AQ9H1H9 1805 aa30.63■■■□□ 2.49
SNAPC2-201ENST00000221573 PLEKHD1A6NEE1 506 aa30.62■■■□□ 2.49
SNAPC2-201ENST00000221573 MAP3K1Q13233 1512 aa30.62■■■□□ 2.49
SNAPC2-201ENST00000221573 CDK11AQ9UQ88 783 aaPredicted RBP30.6■■■□□ 2.49
SNAPC2-201ENST00000221573 ABCC10Q5T3U5 1492 aa30.6■■■□□ 2.49
SNAPC2-201ENST00000221573 TROQ12816 1431 aaPredicted RBP30.59■■■□□ 2.49
SNAPC2-201ENST00000221573 KCNH8Q96L42 1107 aa30.57■■■□□ 2.48
SNAPC2-201ENST00000221573 KIF14Q15058 1648 aa30.56■■■□□ 2.48
SNAPC2-201ENST00000221573 APLP2Q06481 763 aa30.55■■■□□ 2.48
SNAPC2-201ENST00000221573 EHBP1L1Q8N3D4 1523 aa30.55■■■□□ 2.48
SNAPC2-201ENST00000221573 MTUS2Q5JR59 1369 aa30.53■■■□□ 2.48
SNAPC2-201ENST00000221573 LRRC9Q6ZRR7 1453 aa30.53■■■□□ 2.48
SNAPC2-201ENST00000221573 GLI2P10070 1586 aa30.52■■■□□ 2.48
SNAPC2-201ENST00000221573 KANK4Q5T7N3 995 aaPredicted RBP30.5■■■□□ 2.47
SNAPC2-201ENST00000221573 FAM69CQ0P6D2 419 aa30.49■■■□□ 2.47
SNAPC2-201ENST00000221573 ABCA9Q8IUA7 1624 aa30.48■■■□□ 2.47
SNAPC2-201ENST00000221573 TTC37Q6PGP7 1564 aa30.48■■■□□ 2.47
SNAPC2-201ENST00000221573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.48■■■□□ 2.47
SNAPC2-201ENST00000221573 TRHP20396 242 aaPredicted RBP30.47■■■□□ 2.47
SNAPC2-201ENST00000221573 MAP3K4Q9Y6R4 1608 aa30.46■■■□□ 2.47
SNAPC2-201ENST00000221573 SUPT6HQ7KZ85 1726 aaKnown RBP30.44■■■□□ 2.46
SNAPC2-201ENST00000221573 TSPOAP1O95153 1857 aa30.42■■■□□ 2.46
SNAPC2-201ENST00000221573 MYO5CQ9NQX4 1742 aa30.37■■■□□ 2.45
SNAPC2-201ENST00000221573 PPRC1Q5VV67 1664 aaKnown RBP30.36■■■□□ 2.45
SNAPC2-201ENST00000221573 NCOA2Q15596 1464 aa30.35■■■□□ 2.45
SNAPC2-201ENST00000221573 CDC42BPAQ5VT25 1732 aa30.34■■■□□ 2.45
SNAPC2-201ENST00000221573 CD109Q6YHK3 1445 aa30.34■■■□□ 2.45
SNAPC2-201ENST00000221573 PPARGC1BQ86YN6 1023 aaKnown RBP30.33■■■□□ 2.45
SNAPC2-201ENST00000221573 PREX2Q70Z35 1606 aa30.3■■■□□ 2.44
SNAPC2-201ENST00000221573 CDC42BPBQ9Y5S2 1711 aa30.29■■■□□ 2.44
SNAPC2-201ENST00000221573 ITSN2Q9NZM3 1697 aa30.26■■■□□ 2.43
SNAPC2-201ENST00000221573 GPATCH8Q9UKJ3 1502 aaKnown RBP30.25■■■□□ 2.43
SNAPC2-201ENST00000221573 PLCH2O75038 1416 aa30.24■■■□□ 2.43
SNAPC2-201ENST00000221573 CCNB3Q8WWL7 1395 aa30.24■■■□□ 2.43
SNAPC2-201ENST00000221573 ARAP3Q8WWN8 1544 aa30.21■■■□□ 2.43
SNAPC2-201ENST00000221573 ARHGAP5Q13017 1502 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms