RNA–Protein interactions for RNA: ENST00000196169.7

TDRD3-201, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 3,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-201ENST00000196169 ARHGAP35Q9NRY4 1499 aa16.84■□□□□ 0.29
TDRD3-201ENST00000196169 MSH5O43196 834 aa16.83■□□□□ 0.28
TDRD3-201ENST00000196169 HNRNPUQ00839 825 aaKnown RBP eCLIP16.82■□□□□ 0.28
TDRD3-201ENST00000196169 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
TDRD3-201ENST00000196169 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
TDRD3-201ENST00000196169 PHLDB1Q86UU1 1377 aa16.81■□□□□ 0.28
TDRD3-201ENST00000196169 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
TDRD3-201ENST00000196169 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
TDRD3-201ENST00000196169 ERICH3Q5RHP9 1530 aa16.74■□□□□ 0.27
TDRD3-201ENST00000196169 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
TDRD3-201ENST00000196169 ERICH6Q7L0X2 663 aa16.74■□□□□ 0.27
TDRD3-201ENST00000196169 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
TDRD3-201ENST00000196169 CUX2O14529 1486 aa16.73■□□□□ 0.27
TDRD3-201ENST00000196169 CUX1P39880 1505 aa16.73■□□□□ 0.27
TDRD3-201ENST00000196169 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
TDRD3-201ENST00000196169 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
TDRD3-201ENST00000196169 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
TDRD3-201ENST00000196169 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
TDRD3-201ENST00000196169 IGF1RP08069 1367 aa16.65■□□□□ 0.26
TDRD3-201ENST00000196169 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.26
TDRD3-201ENST00000196169 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
TDRD3-201ENST00000196169 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
TDRD3-201ENST00000196169 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
TDRD3-201ENST00000196169 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
TDRD3-201ENST00000196169 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
TDRD3-201ENST00000196169 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
TDRD3-201ENST00000196169 TIAM1Q13009 1591 aa16.61■□□□□ 0.25
TDRD3-201ENST00000196169 RRP7BPQ9NSQ0 103 aa16.59■□□□□ 0.25
TDRD3-201ENST00000196169 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
TDRD3-201ENST00000196169 FOXD1Q16676 465 aa16.56■□□□□ 0.24
TDRD3-201ENST00000196169 NBR1Q14596 966 aa16.56■□□□□ 0.24
TDRD3-201ENST00000196169 HSPA5P11021 654 aaKnown RBP16.55■□□□□ 0.24
TDRD3-201ENST00000196169 POLR3GLQ9BT43 218 aa16.54■□□□□ 0.24
TDRD3-201ENST00000196169 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
TDRD3-201ENST00000196169 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
TDRD3-201ENST00000196169 MRS2Q9HD23 443 aa16.5■□□□□ 0.23
TDRD3-201ENST00000196169 C11orf95C9JLR9 678 aaPredicted RBP16.48■□□□□ 0.23
TDRD3-201ENST00000196169 PTPRKQ15262 1439 aa16.48■□□□□ 0.23
TDRD3-201ENST00000196169 FANCIQ9NVI1 1328 aa16.47■□□□□ 0.23
TDRD3-201ENST00000196169 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
TDRD3-201ENST00000196169 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
TDRD3-201ENST00000196169 PCF11O94913 1555 aaKnown RBP16.47■□□□□ 0.23
TDRD3-201ENST00000196169 FHAD1B1AJZ9 1412 aa16.47■□□□□ 0.23
TDRD3-201ENST00000196169 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.23
TDRD3-201ENST00000196169 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
TDRD3-201ENST00000196169 CFTRP13569 1480 aa16.44■□□□□ 0.22
TDRD3-201ENST00000196169 DEKP35659 375 aaKnown RBP16.44■□□□□ 0.22
TDRD3-201ENST00000196169 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
TDRD3-201ENST00000196169 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
TDRD3-201ENST00000196169 EIF4G2P78344 907 aaKnown RBP eCLIP16.43■□□□□ 0.22
TDRD3-201ENST00000196169 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
TDRD3-201ENST00000196169 L3MBTL2Q969R5 705 aa16.4■□□□□ 0.22
TDRD3-201ENST00000196169 ZNF326Q5BKZ1 582 aaKnown RBP16.39■□□□□ 0.21
TDRD3-201ENST00000196169 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
TDRD3-201ENST00000196169 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
TDRD3-201ENST00000196169 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
TDRD3-201ENST00000196169 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
TDRD3-201ENST00000196169 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
TDRD3-201ENST00000196169 NAIPQ13075 1403 aa16.34■□□□□ 0.21
TDRD3-201ENST00000196169 NOP58Q9Y2X3 529 aaKnown RBP16.33■□□□□ 0.2
TDRD3-201ENST00000196169 SALL2Q9Y467 1007 aaPredicted RBP16.32■□□□□ 0.2
TDRD3-201ENST00000196169 NBPF8Q3BBV2 869 aa16.32■□□□□ 0.2
TDRD3-201ENST00000196169 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
TDRD3-201ENST00000196169 HFM1A2PYH4 1435 aa16.31■□□□□ 0.2
TDRD3-201ENST00000196169 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
TDRD3-201ENST00000196169 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
TDRD3-201ENST00000196169 MPHOSPH9Q99550 1183 aa16.3■□□□□ 0.2
TDRD3-201ENST00000196169 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
TDRD3-201ENST00000196169 CASKIN1Q8WXD9 1431 aa16.3■□□□□ 0.2
TDRD3-201ENST00000196169 FMN1Q68DA7 1419 aa16.27■□□□□ 0.19
TDRD3-201ENST00000196169 PTPN23Q9H3S7 1636 aa16.26■□□□□ 0.19
TDRD3-201ENST00000196169 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
TDRD3-201ENST00000196169 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
TDRD3-201ENST00000196169 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
TDRD3-201ENST00000196169 CNTLNQ9NXG0 1405 aa16.26■□□□□ 0.19
TDRD3-201ENST00000196169 NCOA2Q15596 1464 aa16.26■□□□□ 0.19
TDRD3-201ENST00000196169 CFAP43Q8NDM7 1665 aa16.26■□□□□ 0.19
TDRD3-201ENST00000196169 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
TDRD3-201ENST00000196169 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
TDRD3-201ENST00000196169 KIF7Q2M1P5 1343 aa16.25■□□□□ 0.19
TDRD3-201ENST00000196169 KDM5BQ9UGL1 1544 aa16.25■□□□□ 0.19
TDRD3-201ENST00000196169 RTN4Q9NQC3 1192 aaKnown RBP16.24■□□□□ 0.19
TDRD3-201ENST00000196169 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
TDRD3-201ENST00000196169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.19
TDRD3-201ENST00000196169 ANP32AP39687 249 aaKnown RBP16.21■□□□□ 0.18
TDRD3-201ENST00000196169 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.18
TDRD3-201ENST00000196169 ERICH6BQ5W0A0 696 aa16.2■□□□□ 0.18
TDRD3-201ENST00000196169 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
TDRD3-201ENST00000196169 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
TDRD3-201ENST00000196169 RTL5Q5HYW3 569 aaPredicted RBP16.18■□□□□ 0.18
TDRD3-201ENST00000196169 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
TDRD3-201ENST00000196169 DENND4BO75064 1496 aaPredicted RBP16.18■□□□□ 0.18
TDRD3-201ENST00000196169 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
TDRD3-201ENST00000196169 KDM6BO15054 1643 aa16.16■□□□□ 0.18
TDRD3-201ENST00000196169 SKAP1Q86WV1 359 aa16.16■□□□□ 0.18
TDRD3-201ENST00000196169 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
TDRD3-201ENST00000196169 NCOA1Q15788 1441 aa16.14■□□□□ 0.18
TDRD3-201ENST00000196169 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.17
TDRD3-201ENST00000196169 NUDCQ9Y266 331 aa16.14■□□□□ 0.17
TDRD3-201ENST00000196169 NESP48681 1621 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms