RNA–Protein interactions for RNA: ENST00000196169.7

TDRD3-201, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 3,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-201ENST00000196169 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
TDRD3-201ENST00000196169 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
TDRD3-201ENST00000196169 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
TDRD3-201ENST00000196169 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
TDRD3-201ENST00000196169 HRCP23327 699 aa20.02■□□□□ 0.8
TDRD3-201ENST00000196169 PPARGC1BQ86YN6 1023 aaKnown RBP19.99■□□□□ 0.79
TDRD3-201ENST00000196169 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
TDRD3-201ENST00000196169 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
TDRD3-201ENST00000196169 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
TDRD3-201ENST00000196169 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
TDRD3-201ENST00000196169 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
TDRD3-201ENST00000196169 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
TDRD3-201ENST00000196169 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
TDRD3-201ENST00000196169 FAM9AQ8IZU1 332 aaPredicted RBP19.17■□□□□ 0.66
TDRD3-201ENST00000196169 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
TDRD3-201ENST00000196169 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
TDRD3-201ENST00000196169 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
TDRD3-201ENST00000196169 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
TDRD3-201ENST00000196169 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
TDRD3-201ENST00000196169 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
TDRD3-201ENST00000196169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
TDRD3-201ENST00000196169 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
TDRD3-201ENST00000196169 CCER1Q8TC90 406 aaPredicted RBP18.57■□□□□ 0.56
TDRD3-201ENST00000196169 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
TDRD3-201ENST00000196169 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
TDRD3-201ENST00000196169 ACIN1Q9UKV3 1341 aaKnown RBP18.44■□□□□ 0.54
TDRD3-201ENST00000196169 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
TDRD3-201ENST00000196169 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
TDRD3-201ENST00000196169 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
TDRD3-201ENST00000196169 ABCC9O60706 1549 aa18.39■□□□□ 0.54
TDRD3-201ENST00000196169 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
TDRD3-201ENST00000196169 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
TDRD3-201ENST00000196169 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
TDRD3-201ENST00000196169 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
TDRD3-201ENST00000196169 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
TDRD3-201ENST00000196169 UBTFP17480 764 aaKnown RBP18.06■□□□□ 0.48
TDRD3-201ENST00000196169 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
TDRD3-201ENST00000196169 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
TDRD3-201ENST00000196169 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
TDRD3-201ENST00000196169 MIER1Q8N108 512 aa17.98■□□□□ 0.47
TDRD3-201ENST00000196169 WIZO95785 1651 aa17.98■□□□□ 0.47
TDRD3-201ENST00000196169 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
TDRD3-201ENST00000196169 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
TDRD3-201ENST00000196169 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
TDRD3-201ENST00000196169 SOGA1O94964 1423 aa17.89■□□□□ 0.46
TDRD3-201ENST00000196169 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
TDRD3-201ENST00000196169 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
TDRD3-201ENST00000196169 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.42
TDRD3-201ENST00000196169 TNIKQ9UKE5 1360 aa17.69■□□□□ 0.42
TDRD3-201ENST00000196169 MYT1Q01538 1121 aa17.68■□□□□ 0.42
TDRD3-201ENST00000196169 APLP2Q06481 763 aa17.64■□□□□ 0.41
TDRD3-201ENST00000196169 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
TDRD3-201ENST00000196169 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
TDRD3-201ENST00000196169 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
TDRD3-201ENST00000196169 NACADO15069 1562 aa17.56■□□□□ 0.4
TDRD3-201ENST00000196169 ITGAEP38570 1179 aa17.52■□□□□ 0.4
TDRD3-201ENST00000196169 GOLGA3Q08378 1498 aa17.51■□□□□ 0.39
TDRD3-201ENST00000196169 SUPT16HQ9Y5B9 1047 aaKnown RBP17.5■□□□□ 0.39
TDRD3-201ENST00000196169 BCANQ96GW7 911 aa17.5■□□□□ 0.39
TDRD3-201ENST00000196169 CLIP1P30622 1438 aa17.49■□□□□ 0.39
TDRD3-201ENST00000196169 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
TDRD3-201ENST00000196169 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
TDRD3-201ENST00000196169 KCNH8Q96L42 1107 aa17.46■□□□□ 0.39
TDRD3-201ENST00000196169 EEA1Q15075 1411 aa17.39■□□□□ 0.37
TDRD3-201ENST00000196169 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
TDRD3-201ENST00000196169 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
TDRD3-201ENST00000196169 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
TDRD3-201ENST00000196169 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
TDRD3-201ENST00000196169 VPS8Q8N3P4 1428 aa17.34■□□□□ 0.37
TDRD3-201ENST00000196169 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
TDRD3-201ENST00000196169 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
TDRD3-201ENST00000196169 HIRIP3Q9BW71 556 aaPredicted RBP17.29■□□□□ 0.36
TDRD3-201ENST00000196169 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
TDRD3-201ENST00000196169 FKBP8Q14318 412 aa17.23■□□□□ 0.35
TDRD3-201ENST00000196169 DDX10Q13206 875 aaKnown RBP17.23■□□□□ 0.35
TDRD3-201ENST00000196169 KIF21BO75037 1637 aa17.19■□□□□ 0.34
TDRD3-201ENST00000196169 ANP32EQ9BTT0 268 aa17.18■□□□□ 0.34
TDRD3-201ENST00000196169 TRIM52Q96A61 297 aa17.17■□□□□ 0.34
TDRD3-201ENST00000196169 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
TDRD3-201ENST00000196169 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
TDRD3-201ENST00000196169 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.32
TDRD3-201ENST00000196169 FAM50AQ14320 339 aaKnown RBP17.07■□□□□ 0.32
TDRD3-201ENST00000196169 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
TDRD3-201ENST00000196169 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
TDRD3-201ENST00000196169 BCL11AQ9H165 835 aa17.03■□□□□ 0.32
TDRD3-201ENST00000196169 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
TDRD3-201ENST00000196169 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.32
TDRD3-201ENST00000196169 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.31
TDRD3-201ENST00000196169 IRX6P78412 446 aaPredicted RBP17.02■□□□□ 0.31
TDRD3-201ENST00000196169 NEFLP07196 543 aa17.01■□□□□ 0.31
TDRD3-201ENST00000196169 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
TDRD3-201ENST00000196169 RBM19Q9Y4C8 960 aaKnown RBP16.99■□□□□ 0.31
TDRD3-201ENST00000196169 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
TDRD3-201ENST00000196169 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
TDRD3-201ENST00000196169 ANP32CO43423 234 aa16.89■□□□□ 0.29
TDRD3-201ENST00000196169 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
TDRD3-201ENST00000196169 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
TDRD3-201ENST00000196169 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
TDRD3-201ENST00000196169 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
TDRD3-201ENST00000196169 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms