RNA–Protein interactions for RNA: ENST00000172229.7

NGFR-201, Transcript of nerve growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NGFR, Length 3,417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGFR-201ENST00000172229 CNGB1Q14028 1251 aaPredicted RBP23.88■■□□□ 1.41
NGFR-201ENST00000172229 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
NGFR-201ENST00000172229 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
NGFR-201ENST00000172229 RAB3GAP2Q9H2M9 1393 aa23.84■■□□□ 1.41
NGFR-201ENST00000172229 BCANQ96GW7 911 aa23.83■■□□□ 1.41
NGFR-201ENST00000172229 HMGXB3Q12766 1538 aa23.78■■□□□ 1.4
NGFR-201ENST00000172229 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
NGFR-201ENST00000172229 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
NGFR-201ENST00000172229 PHLDB1Q86UU1 1377 aa23.75■■□□□ 1.39
NGFR-201ENST00000172229 RRP7BPQ9NSQ0 103 aa23.74■■□□□ 1.39
NGFR-201ENST00000172229 FBLN2P98095 1184 aa23.74■■□□□ 1.39
NGFR-201ENST00000172229 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
NGFR-201ENST00000172229 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
NGFR-201ENST00000172229 MTUS2Q5JR59 1369 aa23.71■■□□□ 1.39
NGFR-201ENST00000172229 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
NGFR-201ENST00000172229 SETD5Q9C0A6 1442 aa23.61■■□□□ 1.37
NGFR-201ENST00000172229 POLR3GLQ9BT43 218 aa23.6■■□□□ 1.37
NGFR-201ENST00000172229 RRBP1Q9P2E9 1410 aaKnown RBP23.6■■□□□ 1.37
NGFR-201ENST00000172229 CLSPNQ9HAW4 1339 aa23.57■■□□□ 1.36
NGFR-201ENST00000172229 FOXD1Q16676 465 aa23.57■■□□□ 1.36
NGFR-201ENST00000172229 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
NGFR-201ENST00000172229 POLA1P09884 1462 aaPredicted RBP23.53■■□□□ 1.36
NGFR-201ENST00000172229 LRRC9Q6ZRR7 1453 aa23.53■■□□□ 1.36
NGFR-201ENST00000172229 ZNF777Q9ULD5 760 aaPredicted RBP23.53■■□□□ 1.36
NGFR-201ENST00000172229 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
NGFR-201ENST00000172229 ZNF326Q5BKZ1 582 aaKnown RBP23.49■■□□□ 1.35
NGFR-201ENST00000172229 TOPBP1Q92547 1522 aa23.47■■□□□ 1.35
NGFR-201ENST00000172229 SENP3-EIF4A1A0A087X0R7 540 aa23.46■■□□□ 1.35
NGFR-201ENST00000172229 ANP32CO43423 234 aa23.44■■□□□ 1.34
NGFR-201ENST00000172229 TIAM1Q13009 1591 aa23.43■■□□□ 1.34
NGFR-201ENST00000172229 FKBP8Q14318 412 aa23.41■■□□□ 1.34
NGFR-201ENST00000172229 SUPT16HQ9Y5B9 1047 aaKnown RBP23.4■■□□□ 1.34
NGFR-201ENST00000172229 PCF11O94913 1555 aaKnown RBP23.38■■□□□ 1.33
NGFR-201ENST00000172229 PPP1R15AO75807 674 aaPredicted RBP23.37■■□□□ 1.33
NGFR-201ENST00000172229 AQRO60306 1485 aaKnown RBP eCLIP23.37■■□□□ 1.33
NGFR-201ENST00000172229 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
NGFR-201ENST00000172229 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.32
NGFR-201ENST00000172229 NEFLP07196 543 aa23.31■■□□□ 1.32
NGFR-201ENST00000172229 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
NGFR-201ENST00000172229 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
NGFR-201ENST00000172229 FMN1Q68DA7 1419 aa23.29■■□□□ 1.32
NGFR-201ENST00000172229 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
NGFR-201ENST00000172229 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
NGFR-201ENST00000172229 MAPKBP1O60336 1514 aa23.26■■□□□ 1.31
NGFR-201ENST00000172229 FGD6Q6ZV73 1430 aa23.26■■□□□ 1.31
NGFR-201ENST00000172229 DNMBPQ6XZF7 1577 aa23.25■■□□□ 1.31
NGFR-201ENST00000172229 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
NGFR-201ENST00000172229 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
NGFR-201ENST00000172229 HNRNPUQ00839 825 aaKnown RBP eCLIP23.24■■□□□ 1.31
NGFR-201ENST00000172229 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
NGFR-201ENST00000172229 PTPRKQ15262 1439 aa23.22■■□□□ 1.31
NGFR-201ENST00000172229 FAM9BQ8IZU0 186 aa23.19■■□□□ 1.3
NGFR-201ENST00000172229 SLC4A1APQ9BWU0 796 aaKnown RBP23.19■■□□□ 1.3
NGFR-201ENST00000172229 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
NGFR-201ENST00000172229 HSPA5P11021 654 aaKnown RBP23.16■■□□□ 1.3
NGFR-201ENST00000172229 NCOA2Q15596 1464 aa23.16■■□□□ 1.3
NGFR-201ENST00000172229 FYCO1Q9BQS8 1478 aa23.14■■□□□ 1.29
NGFR-201ENST00000172229 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
NGFR-201ENST00000172229 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
NGFR-201ENST00000172229 KDM2AQ9Y2K7 1162 aa23.11■■□□□ 1.29
NGFR-201ENST00000172229 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
NGFR-201ENST00000172229 MYOM3Q5VTT5 1437 aa23.08■■□□□ 1.28
NGFR-201ENST00000172229 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
NGFR-201ENST00000172229 CDK13Q14004 1512 aaKnown RBP23.07■■□□□ 1.28
NGFR-201ENST00000172229 CDK11AQ9UQ88 783 aaPredicted RBP23.05■■□□□ 1.28
NGFR-201ENST00000172229 NAIPQ13075 1403 aa23.02■■□□□ 1.27
NGFR-201ENST00000172229 ZNF608Q9ULD9 1512 aaPredicted RBP23.01■■□□□ 1.27
NGFR-201ENST00000172229 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
NGFR-201ENST00000172229 MAP3K1Q13233 1512 aa22.98■■□□□ 1.27
NGFR-201ENST00000172229 CCDC184Q52MB2 194 aa22.98■■□□□ 1.27
NGFR-201ENST00000172229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.98■■□□□ 1.27
NGFR-201ENST00000172229 TIMELESSQ9UNS1 1208 aa22.98■■□□□ 1.27
NGFR-201ENST00000172229 EFCAB5A4FU69 1503 aa22.98■■□□□ 1.27
NGFR-201ENST00000172229 MRS2Q9HD23 443 aa22.98■■□□□ 1.27
NGFR-201ENST00000172229 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
NGFR-201ENST00000172229 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
NGFR-201ENST00000172229 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
NGFR-201ENST00000172229 TSHZ2Q9NRE2 1034 aa22.96■■□□□ 1.27
NGFR-201ENST00000172229 SALL2Q9Y467 1007 aaPredicted RBP22.95■■□□□ 1.26
NGFR-201ENST00000172229 HFM1A2PYH4 1435 aa22.94■■□□□ 1.26
NGFR-201ENST00000172229 WASHC2AQ641Q2 1341 aa22.94■■□□□ 1.26
NGFR-201ENST00000172229 C11orf95C9JLR9 678 aaPredicted RBP22.93■■□□□ 1.26
NGFR-201ENST00000172229 NBPF8Q3BBV2 869 aa22.91■■□□□ 1.26
NGFR-201ENST00000172229 RGL3Q3MIN7 710 aa22.91■■□□□ 1.26
NGFR-201ENST00000172229 LAMC3Q9Y6N6 1575 aa22.91■■□□□ 1.26
NGFR-201ENST00000172229 PKD2Q13563 968 aa22.9■■□□□ 1.26
NGFR-201ENST00000172229 CUL7Q14999 1698 aa22.9■■□□□ 1.26
NGFR-201ENST00000172229 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
NGFR-201ENST00000172229 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
NGFR-201ENST00000172229 CFAP43Q8NDM7 1665 aa22.87■■□□□ 1.25
NGFR-201ENST00000172229 MYT1LQ9UL68 1186 aa22.87■■□□□ 1.25
NGFR-201ENST00000172229 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
NGFR-201ENST00000172229 HNRNPMP52272 730 aaKnown RBP eCLIP22.86■■□□□ 1.25
NGFR-201ENST00000172229 MAGI3Q5TCQ9 1506 aa22.86■■□□□ 1.25
NGFR-201ENST00000172229 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
NGFR-201ENST00000172229 PRG4Q92954 1404 aaPredicted RBP22.86■■□□□ 1.25
NGFR-201ENST00000172229 EPRSP07814 1512 aaKnown RBP22.85■■□□□ 1.25
NGFR-201ENST00000172229 CCER2I3L3R5 266 aa22.85■■□□□ 1.25
NGFR-201ENST00000172229 CTTNBP2Q8WZ74 1663 aa22.83■■□□□ 1.25
NGFR-201ENST00000172229 TSPY4P0CV99 314 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms