RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Rapgef2Q8CHG7 1496 aa25.72■■□□□ 1.71
Ccdc88c-204ENSMUST00000223097 CadpsQ80TJ1 1355 aa25.67■■□□□ 1.7
Ccdc88c-204ENSMUST00000223097 Ppp1r18Q8BQ30 594 aa25.62■■□□□ 1.69
Ccdc88c-204ENSMUST00000223097 Plekhg3Q4VAC9 1341 aa25.57■■□□□ 1.68
Ccdc88c-204ENSMUST00000223097 Soga1E1U8D0 1418 aa25.56■■□□□ 1.68
Ccdc88c-204ENSMUST00000223097 Setbp1Q9Z180 1582 aa25.55■■□□□ 1.68
Ccdc88c-204ENSMUST00000223097 Chd1P40201 1711 aa25.54■■□□□ 1.68
Ccdc88c-204ENSMUST00000223097 Pla2r1Q62028 1487 aa25.51■■□□□ 1.67
Ccdc88c-204ENSMUST00000223097 Top2aQ01320 1528 aaKnown RBP25.49■■□□□ 1.67
Ccdc88c-204ENSMUST00000223097 Arhgap27A2AB59 869 aa25.46■■□□□ 1.67
Ccdc88c-204ENSMUST00000223097 NrkQ9R0G8 1455 aa25.44■■□□□ 1.66
Ccdc88c-204ENSMUST00000223097 Dnmt1P13864 1620 aaKnown RBP25.41■■□□□ 1.66
Ccdc88c-204ENSMUST00000223097 Neo1P97798 1493 aa25.4■■□□□ 1.66
Ccdc88c-204ENSMUST00000223097 Gpatch8A2A6A1 1505 aa25.4■■□□□ 1.66
Ccdc88c-204ENSMUST00000223097 Gm14025A2AP89 1413 aa25.38■■□□□ 1.65
Ccdc88c-204ENSMUST00000223097 Ifnlr1Q8CGK5 535 aa25.37■■□□□ 1.65
Ccdc88c-204ENSMUST00000223097 SynmQ70IV5 1561 aa25.36■■□□□ 1.65
Ccdc88c-204ENSMUST00000223097 AI481877A2ALV5 1481 aa25.36■■□□□ 1.65
Ccdc88c-204ENSMUST00000223097 Ak9G3UYQ4 1894 aa25.36■■□□□ 1.65
Ccdc88c-204ENSMUST00000223097 Abcc2Q8VI47 1543 aa25.3■■□□□ 1.64
Ccdc88c-204ENSMUST00000223097 Zeb1Q64318 1117 aa25.28■■□□□ 1.64
Ccdc88c-204ENSMUST00000223097 EprsQ8CGC7 1512 aaKnown RBP25.27■■□□□ 1.64
Ccdc88c-204ENSMUST00000223097 BC005561E9Q5E2 1589 aa25.27■■□□□ 1.64
Ccdc88c-204ENSMUST00000223097 Shroom4Q1W617 1475 aa25.27■■□□□ 1.64
Ccdc88c-204ENSMUST00000223097 Map3k4O08648 1597 aa25.26■■□□□ 1.63
Ccdc88c-204ENSMUST00000223097 PxdnQ3UQ28 1475 aa25.23■■□□□ 1.63
Ccdc88c-204ENSMUST00000223097 Abca16E9PWJ7 1678 aa25.22■■□□□ 1.63
Ccdc88c-204ENSMUST00000223097 Ccdc88bQ4QRL3 1481 aa25.2■■□□□ 1.62
Ccdc88c-204ENSMUST00000223097 TchhA0A0B4J1F9 1599 aa25.18■■□□□ 1.62
Ccdc88c-204ENSMUST00000223097 WizO88286 1684 aaKnown RBP25.18■■□□□ 1.62
Ccdc88c-204ENSMUST00000223097 Clasp1Q80TV8 1535 aaKnown RBP25.17■■□□□ 1.62
Ccdc88c-204ENSMUST00000223097 Arhgef12Q8R4H2 1543 aaKnown RBP25.17■■□□□ 1.62
Ccdc88c-204ENSMUST00000223097 Jph4Q80WT0 628 aa25.15■■□□□ 1.62
Ccdc88c-204ENSMUST00000223097 AdgbG3UZ78 1657 aa25.11■■□□□ 1.61
Ccdc88c-204ENSMUST00000223097 Arid3cA6PWV5 409 aa25.11■■□□□ 1.61
Ccdc88c-204ENSMUST00000223097 Ttc37F8VPK0 1563 aa25.1■■□□□ 1.61
Ccdc88c-204ENSMUST00000223097 Slx4Q6P1D7 1565 aa25.1■■□□□ 1.61
Ccdc88c-204ENSMUST00000223097 Adamts12Q811B3 1600 aa25.09■■□□□ 1.61
Ccdc88c-204ENSMUST00000223097 Fkbp15Q6P9Q6 1216 aaKnown RBP25.09■■□□□ 1.61
Ccdc88c-204ENSMUST00000223097 Plppr3Q7TPB0 716 aa25.08■■□□□ 1.61
Ccdc88c-204ENSMUST00000223097 Mapkbp1Q6NS57 1503 aa25.07■■□□□ 1.6
Ccdc88c-204ENSMUST00000223097 Arhgef11Q68FM7 1552 aa25.05■■□□□ 1.6
Ccdc88c-204ENSMUST00000223097 Alpk3Q924C5 1678 aa25.05■■□□□ 1.6
Ccdc88c-204ENSMUST00000223097 Eif4g1Q6NZJ6 1600 aaKnown RBP25.04■■□□□ 1.6
Ccdc88c-204ENSMUST00000223097 Depdc5P61460 1591 aa24.99■■□□□ 1.59
Ccdc88c-204ENSMUST00000223097 Chic1Q8CBW7 227 aa24.99■■□□□ 1.59
Ccdc88c-204ENSMUST00000223097 Rpap1Q80TE0 1409 aa24.98■■□□□ 1.59
Ccdc88c-204ENSMUST00000223097 Igf1rQ60751 1373 aa24.98■■□□□ 1.59
Ccdc88c-204ENSMUST00000223097 Zfyve16Q80U44 1528 aa24.93■■□□□ 1.58
Ccdc88c-204ENSMUST00000223097 Mroh2bQ7M6Y6 1581 aa24.93■■□□□ 1.58
Ccdc88c-204ENSMUST00000223097 Dnajc5gQ8C632 165 aa24.91■■□□□ 1.58
Ccdc88c-204ENSMUST00000223097 Lrrc9Q8CDN9 1456 aa24.9■■□□□ 1.58
Ccdc88c-204ENSMUST00000223097 Fndc1E9Q043 1732 aa24.9■■□□□ 1.58
Ccdc88c-204ENSMUST00000223097 MlecQ6ZQI3 291 aaKnown RBP24.87■■□□□ 1.57
Ccdc88c-204ENSMUST00000223097 Gm7298A0A0N4SVU1 1476 aa24.86■■□□□ 1.57
Ccdc88c-204ENSMUST00000223097 Cyb5rlB1AS42 316 aa24.86■■□□□ 1.57
Ccdc88c-204ENSMUST00000223097 Znf608Q56A10 1511 aa24.84■■□□□ 1.57
Ccdc88c-204ENSMUST00000223097 Npm2Q80W85 207 aa24.83■■□□□ 1.57
Ccdc88c-204ENSMUST00000223097 Kdm5bQ80Y84 1544 aa24.79■■□□□ 1.56
Ccdc88c-204ENSMUST00000223097 WrnO09053 1401 aa24.78■■□□□ 1.56
Ccdc88c-204ENSMUST00000223097 Carmil1Q6EDY6 1374 aa24.78■■□□□ 1.56
Ccdc88c-204ENSMUST00000223097 Wdr7Q920I9 1489 aa24.75■■□□□ 1.55
Ccdc88c-204ENSMUST00000223097 Abca5Q8K448 1642 aa24.74■■□□□ 1.55
Ccdc88c-204ENSMUST00000223097 Map3k1P53349 1493 aa24.71■■□□□ 1.55
Ccdc88c-204ENSMUST00000223097 Rrbp1Q99PL5 1605 aaKnown RBP24.71■■□□□ 1.55
Ccdc88c-204ENSMUST00000223097 AglF8VPN4 1532 aa24.62■■□□□ 1.53
Ccdc88c-204ENSMUST00000223097 Brwd3A2AHJ4 1799 aa24.59■■□□□ 1.53
Ccdc88c-204ENSMUST00000223097 Atp10dQ8K2X1 1416 aa24.59■■□□□ 1.53
Ccdc88c-204ENSMUST00000223097 NhsB1AV60 1647 aa24.56■■□□□ 1.52
Ccdc88c-204ENSMUST00000223097 Ercc6l2Q9JIM3 1537 aa24.56■■□□□ 1.52
Ccdc88c-204ENSMUST00000223097 Polr1aO35134 1717 aaKnown RBP24.55■■□□□ 1.52
Ccdc88c-204ENSMUST00000223097 Arhgap31A6X8Z5 1425 aa24.55■■□□□ 1.52
Ccdc88c-204ENSMUST00000223097 Kdm6bQ5NCY0 1641 aa24.53■■□□□ 1.52
Ccdc88c-204ENSMUST00000223097 Rnf17Q99MV7 1640 aa24.53■■□□□ 1.52
Ccdc88c-204ENSMUST00000223097 Cul7Q8VE73 1689 aa24.5■■□□□ 1.51
Ccdc88c-204ENSMUST00000223097 Arhgap35Q91YM2 1499 aa24.48■■□□□ 1.51
Ccdc88c-204ENSMUST00000223097 Hecw2Q6I6G8 1578 aa24.46■■□□□ 1.51
Ccdc88c-204ENSMUST00000223097 Naip2Q9QUK4 1447 aa24.45■■□□□ 1.51
Ccdc88c-204ENSMUST00000223097 Ccdc141E9Q8Q6 1531 aa24.44■■□□□ 1.5
Ccdc88c-204ENSMUST00000223097 Cux1P53564 1515 aa24.42■■□□□ 1.5
Ccdc88c-204ENSMUST00000223097 A2mQ6GQT1 1474 aa24.41■■□□□ 1.5
Ccdc88c-204ENSMUST00000223097 Clip1Q922J3 1391 aa24.37■■□□□ 1.49
Ccdc88c-204ENSMUST00000223097 Fbxo41Q6NS60 873 aa24.35■■□□□ 1.49
Ccdc88c-204ENSMUST00000223097 Fyco1Q8VDC1 1437 aa24.34■■□□□ 1.49
Ccdc88c-204ENSMUST00000223097 Gcc2Q8CHG3 1679 aa24.3■■□□□ 1.48
Ccdc88c-204ENSMUST00000223097 Abca8bQ8K440 1620 aa24.29■■□□□ 1.48
Ccdc88c-204ENSMUST00000223097 Mroh2aD3Z750 1679 aa24.28■■□□□ 1.48
Ccdc88c-204ENSMUST00000223097 Fancd2Q80V62 1450 aa24.27■■□□□ 1.48
Ccdc88c-204ENSMUST00000223097 Kiaa1210E9Q0C6 1637 aa24.25■■□□□ 1.47
Ccdc88c-204ENSMUST00000223097 Gab3Q8BSM5 595 aa24.23■■□□□ 1.47
Ccdc88c-204ENSMUST00000223097 PtprmP28828 1452 aa24.22■■□□□ 1.47
Ccdc88c-204ENSMUST00000223097 Ncoa2Q61026 1462 aa24.21■■□□□ 1.47
Ccdc88c-204ENSMUST00000223097 Synj2Q9D2G5 1434 aa24.2■■□□□ 1.46
Ccdc88c-204ENSMUST00000223097 MyclP10166 368 aa24.19■■□□□ 1.46
Ccdc88c-204ENSMUST00000223097 Mlh3A0A1Y7VMP7 1443 aa24.18■■□□□ 1.46
Ccdc88c-204ENSMUST00000223097 BlmO88700 1416 aa24.17■■□□□ 1.46
Ccdc88c-204ENSMUST00000223097 Myt1lP97500 1187 aa24.16■■□□□ 1.46
Ccdc88c-204ENSMUST00000223097 Aebp1Q640N1 1128 aa24.15■■□□□ 1.46
Ccdc88c-204ENSMUST00000223097 Qser1A2BIE1 1698 aa24.14■■□□□ 1.45
Ccdc88c-204ENSMUST00000223097 Rapgef6Q5NCJ1 1609 aa24.13■■□□□ 1.45
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms