RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Rad54l2Q99NG0 1466 aa14.07□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 Wdr66E9Q743 1299 aa14.07□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 Crocc2F6XLV1 1638 aa14.06□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 CenpbP27790 599 aa14.06□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 Arhgef5E9Q7D5 1581 aa14.06□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 CntlnA2AM05 1397 aa14.04□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 Fyco1Q8VDC1 1437 aa14.04□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 SynmQ70IV5 1561 aa14.03□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 Supt5hO55201 1082 aaKnown RBP14.03□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 Aebp1Q640N1 1128 aa14.03□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 Rpap1Q80TE0 1409 aa14.02□□□□□ -0.16
Sh3rf1-202ENSMUST00000209611 Ube2uB1AUC4 352 aa14.01□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 TonslQ6NZL6 1363 aa14.01□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Polr1aO35134 1717 aaKnown RBP14□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Kif21aQ9QXL2 1672 aa14□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Ankrd26Q811D2 1581 aa13.99□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Plb1Q3TTY0 1478 aa13.99□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Samd9lQ69Z37 1561 aa13.99□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Naip1Q9QWK5 1403 aa13.98□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Urb2E9Q7L1 1524 aaKnown RBP13.97□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Tiam1Q60610 1591 aa13.97□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Cux1P53564 1515 aa13.97□□□□□ -0.17
Sh3rf1-202ENSMUST00000209611 Pcf11G3X9Z4 1553 aa13.93□□□□□ -0.18
Sh3rf1-202ENSMUST00000209611 EprsQ8CGC7 1512 aaKnown RBP13.93□□□□□ -0.18
Sh3rf1-202ENSMUST00000209611 Ncapd3Q6ZQK0 1506 aa13.92□□□□□ -0.18
Sh3rf1-202ENSMUST00000209611 Arhgap27A2AB59 869 aa13.92□□□□□ -0.18
Sh3rf1-202ENSMUST00000209611 Erich3F6QRE9 1637 aa13.91□□□□□ -0.18
Sh3rf1-202ENSMUST00000209611 Kif27Q7M6Z4 1394 aa13.91□□□□□ -0.18
Sh3rf1-202ENSMUST00000209611 Ift140E9PY46 1464 aa13.89□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Eid3Q3V124 375 aa13.89□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Grin2aP35436 1464 aa13.89□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 CadpsQ80TJ1 1355 aa13.87□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Gm7298A0A0N4SVU1 1476 aa13.87□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Myt1Q8CFC2 1127 aa13.86□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Pla2r1Q62028 1487 aa13.86□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Disp1Q3TDN0 1521 aa13.85□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Slx4Q6P1D7 1565 aa13.84□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Ccer2J3QPU5 274 aa13.83□□□□□ -0.19
Sh3rf1-202ENSMUST00000209611 Magi3Q9EQJ9 1476 aa13.82□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 Sall2Q9QX96 1004 aa13.81□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 Mia2Q91ZV0 1396 aa13.8□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 Chic2Q9D9G3 165 aa13.8□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 Lmo7E9PYF4 1699 aaKnown RBP13.8□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 WrnO09053 1401 aa13.8□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 Cc2d2bA0A286YDU8 1405 aa13.78□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 NclP09405 707 aaKnown RBP13.78□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 Ccnb3Q810T2 1396 aa13.77□□□□□ -0.2
Sh3rf1-202ENSMUST00000209611 Fkbp15Q6P9Q6 1216 aaKnown RBP13.77□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 TchhA0A0B4J1F9 1599 aa13.76□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 ClspnQ80YR7 1315 aa13.76□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 Soga1E1U8D0 1418 aa13.75□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 Gpatch8A2A6A1 1505 aa13.75□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 WizO88286 1684 aaKnown RBP13.75□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 Aebp2Q9Z248 504 aaKnown RBP13.74□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 Peg3Q3URU2 1571 aa13.73□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 Gm1043A0A140LJC2 1431 aa13.73□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 Nup160Q9Z0W3 1402 aaKnown RBP13.73□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 Ppargc1bQ8VHJ7 1014 aa13.73□□□□□ -0.21
Sh3rf1-202ENSMUST00000209611 PxdnQ3UQ28 1475 aa13.7□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 Lrriq1Q0P5X1 1673 aa13.7□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 Pbrm1Q8BSQ9 1634 aaKnown RBP13.7□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 Abca5Q8K448 1642 aa13.69□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 Adamts12Q811B3 1600 aa13.68□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 Fhad1A6PWD2 1420 aa13.68□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 AknaQ80VW7 1404 aa13.67□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 Cdk11bP24788 784 aaKnown RBP13.67□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 3425401B19RikD3Z1D3 1412 aa13.66□□□□□ -0.22
Sh3rf1-202ENSMUST00000209611 Dhx57Q6P5D3 1388 aaKnown RBP13.64□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 UacaQ8CGB3 1411 aa13.63□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Vps8Q0P5W1 1427 aa13.63□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Mtus2Q3UHD3 1353 aa13.63□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 NexmifQ5DTT1 1515 aa13.63□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Cabp1Q9JLK7 227 aa13.62□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Arhgap31A6X8Z5 1425 aa13.62□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Jph4Q80WT0 628 aa13.62□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Ncoa2Q61026 1462 aa13.62□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Naip2Q9QUK4 1447 aa13.61□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Mug1P28665 1476 aa13.61□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 A2mQ6GQT1 1474 aa13.59□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 BC005561E9Q5E2 1589 aa13.59□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Kdm5bQ80Y84 1544 aa13.59□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Shroom2A2ALU4 1481 aa13.59□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Fgd6Q69ZL1 1399 aa13.59□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Plekhh2Q8C115 1491 aa13.59□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Abca16E9PWJ7 1678 aa13.59□□□□□ -0.23
Sh3rf1-202ENSMUST00000209611 Hspa5P20029 655 aaKnown RBP13.58□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Setd1bQ8CFT2 1985 aa13.57□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Lmtk2Q3TYD6 1471 aa13.57□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Neurod1Q60867 357 aa13.57□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Rusc2Q80U22 1514 aa13.57□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Rapgef6Q5NCJ1 1609 aa13.56□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Ifnlr1Q8CGK5 535 aa13.56□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Ncoa3O09000 1398 aa13.56□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Nop58Q6DFW4 536 aaKnown RBP13.55□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Ccdc141E9Q8Q6 1531 aa13.55□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Ankrd36D3Z4K0 1415 aa13.55□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Pelp1Q9DBD5 1123 aaKnown RBP13.55□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Fam163aQ8CAA5 168 aa13.54□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Neo1P97798 1493 aa13.54□□□□□ -0.24
Sh3rf1-202ENSMUST00000209611 Mphosph9A6H5Y1 991 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms