RNA–Protein interactions for RNA: ENSMUST00000188894.6

Fn1-214, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 8,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-214ENSMUST00000188894 Ciz1Q8VEH2 845 aa15.68■□□□□ 0.1
Fn1-214ENSMUST00000188894 Upf2A2AT37 1269 aaKnown RBP15.67■□□□□ 0.1
Fn1-214ENSMUST00000188894 Arid4bA2CG63 1314 aaKnown RBP15.62■□□□□ 0.09
Fn1-214ENSMUST00000188894 Noc3lQ8VI84 807 aaKnown RBP15.61■□□□□ 0.09
Fn1-214ENSMUST00000188894 IqubQ8CDK3 788 aa15.61■□□□□ 0.09
Fn1-214ENSMUST00000188894 Isy1Q69ZQ2 285 aaKnown RBP15.6■□□□□ 0.09
Fn1-214ENSMUST00000188894 DekQ7TNV0 380 aaKnown RBP15.59■□□□□ 0.09
Fn1-214ENSMUST00000188894 Kdm2aP59997 1161 aa15.59■□□□□ 0.09
Fn1-214ENSMUST00000188894 Exosc9Q9JHI7 438 aaKnown RBP15.57■□□□□ 0.08
Fn1-214ENSMUST00000188894 1700019A02RikA0A087WPV9 146 aa15.56■□□□□ 0.08
Fn1-214ENSMUST00000188894 Fbln2P37889 1221 aa15.55■□□□□ 0.08
Fn1-214ENSMUST00000188894 Eid3Q3V124 375 aa15.53■□□□□ 0.08
Fn1-214ENSMUST00000188894 Arhgap27A2AB59 869 aa15.53■□□□□ 0.08
Fn1-214ENSMUST00000188894 Stk24Q99KH8 431 aa15.53■□□□□ 0.08
Fn1-214ENSMUST00000188894 Sox12Q04890 314 aa15.5■□□□□ 0.07
Fn1-214ENSMUST00000188894 PnnO35691 725 aaKnown RBP15.49■□□□□ 0.07
Fn1-214ENSMUST00000188894 Pes1Q9EQ61 584 aaKnown RBP15.48■□□□□ 0.07
Fn1-214ENSMUST00000188894 Ripply1Q2WG77 201 aa15.45■□□□□ 0.06
Fn1-214ENSMUST00000188894 Hs1bp3Q3TC93 395 aa15.45■□□□□ 0.06
Fn1-214ENSMUST00000188894 Eif4g2Q62448 906 aaKnown RBP15.45■□□□□ 0.06
Fn1-214ENSMUST00000188894 Gm6268A2A3U9 297 aa15.45■□□□□ 0.06
Fn1-214ENSMUST00000188894 Srpk2O54781 681 aaKnown RBP15.44■□□□□ 0.06
Fn1-214ENSMUST00000188894 Plin1Q8CGN5 517 aa15.43■□□□□ 0.06
Fn1-214ENSMUST00000188894 Ccdc180J3QNE4 1664 aa15.42■□□□□ 0.06
Fn1-214ENSMUST00000188894 Myt1Q8CFC2 1127 aa15.42■□□□□ 0.06
Fn1-214ENSMUST00000188894 Stag3O70576 1240 aa15.41■□□□□ 0.06
Fn1-214ENSMUST00000188894 Pip4k2bQ80XI4 416 aa15.41■□□□□ 0.06
Fn1-214ENSMUST00000188894 Sh3bp5Q9Z131 463 aa15.4■□□□□ 0.06
Fn1-214ENSMUST00000188894 Vps53Q8CCB4 832 aa15.39■□□□□ 0.05
Fn1-214ENSMUST00000188894 Kcnn1Q9EQR3 537 aa15.39■□□□□ 0.05
Fn1-214ENSMUST00000188894 Clstn2Q9ER65 966 aa15.39■□□□□ 0.05
Fn1-214ENSMUST00000188894 Paf1Q8K2T8 535 aa15.38■□□□□ 0.05
Fn1-214ENSMUST00000188894 Mier1Q5UAK0 511 aa15.37■□□□□ 0.05
Fn1-214ENSMUST00000188894 Gm20521D3Z5F7 333 aa15.36■□□□□ 0.05
Fn1-214ENSMUST00000188894 Tomm22Q9CPQ3 142 aa15.36■□□□□ 0.05
Fn1-214ENSMUST00000188894 Arid3cA6PWV5 409 aa15.36■□□□□ 0.05
Fn1-214ENSMUST00000188894 Cnga1P29974 684 aa15.35■□□□□ 0.05
Fn1-214ENSMUST00000188894 Psme1P97371 249 aa15.34■□□□□ 0.05
Fn1-214ENSMUST00000188894 Rtl5Q5DTT4 599 aa15.33■□□□□ 0.05
Fn1-214ENSMUST00000188894 Tnnt1O88346 262 aa15.33■□□□□ 0.04
Fn1-214ENSMUST00000188894 PtmaP26350 111 aa15.32■□□□□ 0.04
Fn1-214ENSMUST00000188894 Rgl3Q3UYI5 709 aa15.31■□□□□ 0.04
Fn1-214ENSMUST00000188894 Nol10Q5RJG1 687 aaKnown RBP15.31■□□□□ 0.04
Fn1-214ENSMUST00000188894 Pak3Q61036 559 aa15.3■□□□□ 0.04
Fn1-214ENSMUST00000188894 Anapc15P60007 132 aa15.3■□□□□ 0.04
Fn1-214ENSMUST00000188894 HdgfP51859 237 aaKnown RBP15.29■□□□□ 0.04
Fn1-214ENSMUST00000188894 Znf316Q6PGE4 1016 aa15.28■□□□□ 0.04
Fn1-214ENSMUST00000188894 Rrp7aQ9D1C9 280 aaKnown RBP15.28■□□□□ 0.04
Fn1-214ENSMUST00000188894 Sf3b2Q3UJB0 878 aaKnown RBP15.27■□□□□ 0.04
Fn1-214ENSMUST00000188894 Stk26Q99JT2 416 aa15.27■□□□□ 0.04
Fn1-214ENSMUST00000188894 Rassf8Q8CJ96 419 aa15.26■□□□□ 0.03
Fn1-214ENSMUST00000188894 Mroh3A0A1D5RM54 893 aa15.25■□□□□ 0.03
Fn1-214ENSMUST00000188894 Mapk8ip3Q9ESN9 1337 aa15.24■□□□□ 0.03
Fn1-214ENSMUST00000188894 Txndc2Q6P902 515 aa15.24■□□□□ 0.03
Fn1-214ENSMUST00000188894 Ccar1Q8CH18 1146 aaKnown RBP15.24■□□□□ 0.03
Fn1-214ENSMUST00000188894 Apbb1Q9QXJ1 710 aa15.24■□□□□ 0.03
Fn1-214ENSMUST00000188894 ArsiQ32KI9 573 aa15.23■□□□□ 0.03
Fn1-214ENSMUST00000188894 Klf15Q9EPW2 415 aa15.23■□□□□ 0.03
Fn1-214ENSMUST00000188894 Plagl1Q9JLQ4 704 aa15.23■□□□□ 0.03
Fn1-214ENSMUST00000188894 Plcb2A3KGF7 1181 aa15.22■□□□□ 0.03
Fn1-214ENSMUST00000188894 AcrbpQ3V140 540 aa15.22■□□□□ 0.03
Fn1-214ENSMUST00000188894 Neurod2Q62414 383 aa15.21■□□□□ 0.03
Fn1-214ENSMUST00000188894 Sugp2Q8CH09 1067 aa15.21■□□□□ 0.03
Fn1-214ENSMUST00000188894 Ncbp3Q8BZR9 615 aaKnown RBP15.21■□□□□ 0.03
Fn1-214ENSMUST00000188894 Rsph4aQ8BYM7 716 aa15.2■□□□□ 0.02
Fn1-214ENSMUST00000188894 Iqcf3Q9D498 203 aa15.19■□□□□ 0.02
Fn1-214ENSMUST00000188894 Clip1Q922J3 1391 aa15.17■□□□□ 0.02
Fn1-214ENSMUST00000188894 Senp3Q9EP97 568 aaKnown RBP15.17■□□□□ 0.02
Fn1-214ENSMUST00000188894 MycnP03966 462 aaKnown RBP15.17■□□□□ 0.02
Fn1-214ENSMUST00000188894 Rtf1A2AQ19 715 aaKnown RBP15.15■□□□□ 0.02
Fn1-214ENSMUST00000188894 Spryd3E9Q9B3 442 aa15.15■□□□□ 0.02
Fn1-214ENSMUST00000188894 Armcx1Q9CX83 456 aa15.15■□□□□ 0.02
Fn1-214ENSMUST00000188894 Ppp4r2Q0VGB7 417 aa15.14■□□□□ 0.01
Fn1-214ENSMUST00000188894 U2surpQ6NV83 1029 aaKnown RBP15.14■□□□□ 0.01
Fn1-214ENSMUST00000188894 Hsp90b1P08113 802 aaKnown RBP15.13■□□□□ 0.01
Fn1-214ENSMUST00000188894 Chmp3Q9CQ10 224 aa15.13■□□□□ 0.01
Fn1-214ENSMUST00000188894 Mical1Q8VDP3 1048 aa15.11■□□□□ 0.01
Fn1-214ENSMUST00000188894 Dnai2A2AC93 623 aa15.1■□□□□ 0.01
Fn1-214ENSMUST00000188894 Taok2Q6ZQ29 1240 aa15.1■□□□□ 0.01
Fn1-214ENSMUST00000188894 AknaQ80VW7 1404 aa15.09■□□□□ 0.01
Fn1-214ENSMUST00000188894 Kif7B7ZNG0 1348 aa15.08■□□□□ 0.01
Fn1-214ENSMUST00000188894 Ppm1gQ61074 542 aa15.08■□□□□ 0
Fn1-214ENSMUST00000188894 Arid3aQ62431 601 aa15.08■□□□□ 0
Fn1-214ENSMUST00000188894 Cyb5rlB1AS42 316 aa15.07■□□□□ 0
Fn1-214ENSMUST00000188894 BlmO88700 1416 aa15.06■□□□□ 0
Fn1-214ENSMUST00000188894 Gm38655A0A286YDK6 273 aa15.05■□□□□ 0
Fn1-214ENSMUST00000188894 Hsp90ab1P11499 724 aaKnown RBP15.03■□□□□ -0
Fn1-214ENSMUST00000188894 Egfem1Q8C088 590 aa15.03■□□□□ -0
Fn1-214ENSMUST00000188894 Birc3O08863 600 aa15.02□□□□□ -0.01
Fn1-214ENSMUST00000188894 Trim30dE9PWL0 497 aa15.01□□□□□ -0.01
Fn1-214ENSMUST00000188894 Dmrt2Q8BG36 561 aa15.01□□□□□ -0.01
Fn1-214ENSMUST00000188894 Trim44Q9QXA7 346 aa15□□□□□ -0.01
Fn1-214ENSMUST00000188894 Dhx16G3X8X0 1044 aaKnown RBP14.98□□□□□ -0.01
Fn1-214ENSMUST00000188894 Anp32aO35381 247 aa14.98□□□□□ -0.01
Fn1-214ENSMUST00000188894 Ercc6F8VPZ5 1481 aa14.98□□□□□ -0.01
Fn1-214ENSMUST00000188894 Supt5hO55201 1082 aaKnown RBP14.97□□□□□ -0.01
Fn1-214ENSMUST00000188894 Q3TQI7 289 aaKnown RBP14.97□□□□□ -0.01
Fn1-214ENSMUST00000188894 Mak16Q8BGS0 296 aaKnown RBP14.96□□□□□ -0.02
Fn1-214ENSMUST00000188894 Kri1Q8VDQ9 704 aaKnown RBP14.96□□□□□ -0.02
Fn1-214ENSMUST00000188894 Dbr1Q923B1 550 aa14.96□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms