RNA–Protein interactions for RNA: ENSMUST00000188894.6

Fn1-214, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 8,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-214ENSMUST00000188894 Rhox8Q6VSS7 320 aa20.96■□□□□ 0.95
Fn1-214ENSMUST00000188894 Ube2uB1AUC4 352 aa19.3■□□□□ 0.68
Fn1-214ENSMUST00000188894 Zeb1Q64318 1117 aa19.07■□□□□ 0.64
Fn1-214ENSMUST00000188894 Esf1Q3V1V3 845 aaKnown RBP18.96■□□□□ 0.63
Fn1-214ENSMUST00000188894 Cngb1E1AZ71 1325 aa18.73■□□□□ 0.59
Fn1-214ENSMUST00000188894 Ehmt2Q9Z148 1263 aaKnown RBP18.65■□□□□ 0.58
Fn1-214ENSMUST00000188894 Npm2Q80W85 207 aa18.53■□□□□ 0.56
Fn1-214ENSMUST00000188894 Wdr66E9Q743 1299 aa18.37■□□□□ 0.53
Fn1-214ENSMUST00000188894 Ccdc136Q3TVA9 1136 aa18.31■□□□□ 0.52
Fn1-214ENSMUST00000188894 Myt1lP97500 1187 aa18.3■□□□□ 0.52
Fn1-214ENSMUST00000188894 Gab3Q8BSM5 595 aa18.25■□□□□ 0.51
Fn1-214ENSMUST00000188894 Las1lA2BE28 776 aaKnown RBP18.07■□□□□ 0.48
Fn1-214ENSMUST00000188894 Plppr3Q7TPB0 716 aa18.07■□□□□ 0.48
Fn1-214ENSMUST00000188894 Pelp1Q9DBD5 1123 aaKnown RBP18.02■□□□□ 0.48
Fn1-214ENSMUST00000188894 Slc24a1Q91WD8 1130 aa17.89■□□□□ 0.45
Fn1-214ENSMUST00000188894 Il27Q8K3I6 234 aa17.87■□□□□ 0.45
Fn1-214ENSMUST00000188894 Os9Q8K2C7 672 aa17.84■□□□□ 0.45
Fn1-214ENSMUST00000188894 Rpgrip1Q9EPQ2 1331 aa17.79■□□□□ 0.44
Fn1-214ENSMUST00000188894 Ifnlr1Q8CGK5 535 aa17.79■□□□□ 0.44
Fn1-214ENSMUST00000188894 Gm13697A2AK42 830 aa17.77■□□□□ 0.44
Fn1-214ENSMUST00000188894 HrcG5E8J6 738 aa17.72■□□□□ 0.43
Fn1-214ENSMUST00000188894 Amer1Q7TS75 1132 aa17.71■□□□□ 0.43
Fn1-214ENSMUST00000188894 Chic1Q8CBW7 227 aa17.68■□□□□ 0.42
Fn1-214ENSMUST00000188894 Ttbk1Q6PCN3 1308 aa17.62■□□□□ 0.41
Fn1-214ENSMUST00000188894 Zbtb7cQ8VCZ7 619 aa17.53■□□□□ 0.4
Fn1-214ENSMUST00000188894 Neurod1Q60867 357 aa17.48■□□□□ 0.39
Fn1-214ENSMUST00000188894 Ap3b1Q9Z1T1 1105 aa17.42■□□□□ 0.38
Fn1-214ENSMUST00000188894 Trim41Q5NCC3 630 aa17.38■□□□□ 0.37
Fn1-214ENSMUST00000188894 Atp1b4Q99ME6 356 aa17.35■□□□□ 0.37
Fn1-214ENSMUST00000188894 UbtfP25976 765 aaKnown RBP17.35■□□□□ 0.37
Fn1-214ENSMUST00000188894 Gm13695A2AK44 830 aa17.31■□□□□ 0.36
Fn1-214ENSMUST00000188894 DiexfQ8BTT6 772 aaKnown RBP17.29■□□□□ 0.36
Fn1-214ENSMUST00000188894 Hnrnpul2Q00PI9 745 aaKnown RBP17.18■□□□□ 0.34
Fn1-214ENSMUST00000188894 Fam50aQ9WV03 339 aaKnown RBP17.12■□□□□ 0.33
Fn1-214ENSMUST00000188894 4930567H17RikQ3V0K5 233 aa17.09■□□□□ 0.33
Fn1-214ENSMUST00000188894 Prdm10Q3UTQ7 1184 aa17.06■□□□□ 0.32
Fn1-214ENSMUST00000188894 Erich6D3Z6S9 713 aa17.05■□□□□ 0.32
Fn1-214ENSMUST00000188894 Safb2Q80YR5 991 aaKnown RBP17.01■□□□□ 0.31
Fn1-214ENSMUST00000188894 Zbtb4Q5F293 982 aa16.99■□□□□ 0.31
Fn1-214ENSMUST00000188894 Anp32bQ9EST5 272 aaKnown RBP16.98■□□□□ 0.31
Fn1-214ENSMUST00000188894 NclP09405 707 aaKnown RBP16.96■□□□□ 0.31
Fn1-214ENSMUST00000188894 Eif5bQ05D44 1216 aaKnown RBP16.94■□□□□ 0.3
Fn1-214ENSMUST00000188894 Fkbp15Q6P9Q6 1216 aaKnown RBP16.94■□□□□ 0.3
Fn1-214ENSMUST00000188894 NrdcQ8BHG1 1161 aa16.86■□□□□ 0.29
Fn1-214ENSMUST00000188894 Gm35339A0A140LHH9 1649 aa16.83■□□□□ 0.28
Fn1-214ENSMUST00000188894 Cdk11bP24788 784 aaKnown RBP16.83■□□□□ 0.28
Fn1-214ENSMUST00000188894 NeflP08551 543 aa16.81■□□□□ 0.28
Fn1-214ENSMUST00000188894 4933416C03RikQ3V063 378 aa16.75■□□□□ 0.27
Fn1-214ENSMUST00000188894 Stra8P70278 393 aa16.75■□□□□ 0.27
Fn1-214ENSMUST00000188894 Acin1Q9JIX8 1338 aaKnown RBP16.73■□□□□ 0.27
Fn1-214ENSMUST00000188894 Hdac5Q9Z2V6 1113 aa16.73■□□□□ 0.27
Fn1-214ENSMUST00000188894 Polr3glQ8R0C0 218 aa16.69■□□□□ 0.26
Fn1-214ENSMUST00000188894 Npm1Q61937 292 aaKnown RBP16.67■□□□□ 0.26
Fn1-214ENSMUST00000188894 Rangap1P46061 589 aaKnown RBP16.66■□□□□ 0.26
Fn1-214ENSMUST00000188894 Lmod2Q3UHZ5 550 aa16.65■□□□□ 0.26
Fn1-214ENSMUST00000188894 MyclP10166 368 aa16.64■□□□□ 0.25
Fn1-214ENSMUST00000188894 Nlrp6Q91WS2 869 aa16.59■□□□□ 0.25
Fn1-214ENSMUST00000188894 P3h3Q8CG70 732 aa16.58■□□□□ 0.25
Fn1-214ENSMUST00000188894 Abcc9P70170 1546 aa16.56■□□□□ 0.24
Fn1-214ENSMUST00000188894 Ppargc1bQ8VHJ7 1014 aa16.55■□□□□ 0.24
Fn1-214ENSMUST00000188894 Irx6Q9ER75 438 aa16.47■□□□□ 0.23
Fn1-214ENSMUST00000188894 Ggt6Q6PDE7 497 aa16.43■□□□□ 0.22
Fn1-214ENSMUST00000188894 Ythdc1E9Q5K9 736 aaKnown RBP16.41■□□□□ 0.22
Fn1-214ENSMUST00000188894 Znf326O88291 580 aa16.4■□□□□ 0.22
Fn1-214ENSMUST00000188894 ArxO35085 564 aa16.38■□□□□ 0.21
Fn1-214ENSMUST00000188894 Ecm2Q5FW85 670 aa16.36■□□□□ 0.21
Fn1-214ENSMUST00000188894 CenpbP27790 599 aa16.35■□□□□ 0.21
Fn1-214ENSMUST00000188894 Rtn4Q99P72 1162 aaKnown RBP16.32■□□□□ 0.2
Fn1-214ENSMUST00000188894 Ubap1lG3UW59 384 aa16.3■□□□□ 0.2
Fn1-214ENSMUST00000188894 Clstn1Q9EPL2 979 aa16.28■□□□□ 0.2
Fn1-214ENSMUST00000188894 NefmP08553 848 aa16.28■□□□□ 0.2
Fn1-214ENSMUST00000188894 Ppm1fQ8CGA0 452 aa16.26■□□□□ 0.19
Fn1-214ENSMUST00000188894 Zcchc6Q5BLK4 1491 aaKnown RBP16.24■□□□□ 0.19
Fn1-214ENSMUST00000188894 Q8BT18 775 aa16.21■□□□□ 0.19
Fn1-214ENSMUST00000188894 Vsig10D3YX43 558 aa16.18■□□□□ 0.18
Fn1-214ENSMUST00000188894 NgefQ8CHT1 710 aa16.15■□□□□ 0.18
Fn1-214ENSMUST00000188894 Hsp90aa1P07901 733 aaKnown RBP16.15■□□□□ 0.18
Fn1-214ENSMUST00000188894 MlecQ6ZQI3 291 aaKnown RBP16.15■□□□□ 0.18
Fn1-214ENSMUST00000188894 CatipB9EKE5 520 aa16.08■□□□□ 0.16
Fn1-214ENSMUST00000188894 Ubl4bQ9CQ84 188 aa16.05■□□□□ 0.16
Fn1-214ENSMUST00000188894 Slc4a1apE9PX68 744 aa16.02■□□□□ 0.16
Fn1-214ENSMUST00000188894 Ppp1r18Q8BQ30 594 aa15.99■□□□□ 0.15
Fn1-214ENSMUST00000188894 Plekhg3Q4VAC9 1341 aa15.98■□□□□ 0.15
Fn1-214ENSMUST00000188894 Fgd1P52734 960 aa15.96■□□□□ 0.15
Fn1-214ENSMUST00000188894 Aplp2Q06335 707 aa15.94■□□□□ 0.14
Fn1-214ENSMUST00000188894 Trim26Q99PN3 545 aa15.93■□□□□ 0.14
Fn1-214ENSMUST00000188894 Mapk8ip2Q9ERE9 830 aa15.91■□□□□ 0.14
Fn1-214ENSMUST00000188894 Lmod3E9QA62 571 aa15.87■□□□□ 0.13
Fn1-214ENSMUST00000188894 NischQ80TM9 1593 aa15.87■□□□□ 0.13
Fn1-214ENSMUST00000188894 Csrnp3P59055 597 aa15.86■□□□□ 0.13
Fn1-214ENSMUST00000188894 TonslQ6NZL6 1363 aa15.85■□□□□ 0.13
Fn1-214ENSMUST00000188894 Prm3Q62100 101 aa15.84■□□□□ 0.13
Fn1-214ENSMUST00000188894 Grwd1Q810D6 446 aaKnown RBP15.83■□□□□ 0.13
Fn1-214ENSMUST00000188894 Chrna2Q91X60 512 aa15.83■□□□□ 0.13
Fn1-214ENSMUST00000188894 Rad21Q61550 635 aaKnown RBP15.77■□□□□ 0.12
Fn1-214ENSMUST00000188894 DaxxO35613 739 aa15.74■□□□□ 0.11
Fn1-214ENSMUST00000188894 Nop58Q6DFW4 536 aaKnown RBP15.71■□□□□ 0.11
Fn1-214ENSMUST00000188894 Bcl11bQ99PV8 884 aa15.7■□□□□ 0.1
Fn1-214ENSMUST00000188894 Chic2Q9D9G3 165 aa15.69■□□□□ 0.1
Fn1-214ENSMUST00000188894 Tnnt3Q9QZ47 272 aa15.68■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 116.4 ms