RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Chd1P40201 1711 aa27.08■■□□□ 1.93
Msh3-205ENSMUST00000187424 Rapgef2Q8CHG7 1496 aa27.07■■□□□ 1.92
Msh3-205ENSMUST00000187424 Chic1Q8CBW7 227 aa27.07■■□□□ 1.92
Msh3-205ENSMUST00000187424 Ttbk1Q6PCN3 1308 aa27.06■■□□□ 1.92
Msh3-205ENSMUST00000187424 Ythdc2B2RR83 1445 aaKnown RBP27.03■■□□□ 1.92
Msh3-205ENSMUST00000187424 Setbp1Q9Z180 1582 aa27.02■■□□□ 1.92
Msh3-205ENSMUST00000187424 Pla2r1Q62028 1487 aa27.02■■□□□ 1.92
Msh3-205ENSMUST00000187424 Dnmt1P13864 1620 aaKnown RBP26.94■■□□□ 1.9
Msh3-205ENSMUST00000187424 AknaQ80VW7 1404 aa26.94■■□□□ 1.9
Msh3-205ENSMUST00000187424 NrkQ9R0G8 1455 aa26.93■■□□□ 1.9
Msh3-205ENSMUST00000187424 CadpsQ80TJ1 1355 aa26.9■■□□□ 1.9
Msh3-205ENSMUST00000187424 SynmQ70IV5 1561 aa26.87■■□□□ 1.89
Msh3-205ENSMUST00000187424 Abcc2Q8VI47 1543 aa26.83■■□□□ 1.89
Msh3-205ENSMUST00000187424 BC005561E9Q5E2 1589 aa26.83■■□□□ 1.89
Msh3-205ENSMUST00000187424 Map3k4O08648 1597 aa26.8■■□□□ 1.88
Msh3-205ENSMUST00000187424 Abca16E9PWJ7 1678 aa26.79■■□□□ 1.88
Msh3-205ENSMUST00000187424 Ak9G3UYQ4 1894 aa26.78■■□□□ 1.88
Msh3-205ENSMUST00000187424 Shroom4Q1W617 1475 aa26.77■■□□□ 1.88
Msh3-205ENSMUST00000187424 Soga1E1U8D0 1418 aa26.73■■□□□ 1.87
Msh3-205ENSMUST00000187424 Neo1P97798 1493 aa26.73■■□□□ 1.87
Msh3-205ENSMUST00000187424 AI481877A2ALV5 1481 aa26.72■■□□□ 1.87
Msh3-205ENSMUST00000187424 EprsQ8CGC7 1512 aaKnown RBP26.7■■□□□ 1.87
Msh3-205ENSMUST00000187424 Arhgef12Q8R4H2 1543 aaKnown RBP26.7■■□□□ 1.87
Msh3-205ENSMUST00000187424 PxdnQ3UQ28 1475 aa26.68■■□□□ 1.86
Msh3-205ENSMUST00000187424 HrcG5E8J6 738 aa26.67■■□□□ 1.86
Msh3-205ENSMUST00000187424 Adamts12Q811B3 1600 aa26.66■■□□□ 1.86
Msh3-205ENSMUST00000187424 Gm14025A2AP89 1413 aa26.65■■□□□ 1.86
Msh3-205ENSMUST00000187424 WizO88286 1684 aaKnown RBP26.64■■□□□ 1.86
Msh3-205ENSMUST00000187424 TchhA0A0B4J1F9 1599 aa26.64■■□□□ 1.86
Msh3-205ENSMUST00000187424 Eif4g1Q6NZJ6 1600 aaKnown RBP26.6■■□□□ 1.85
Msh3-205ENSMUST00000187424 Clasp1Q80TV8 1535 aaKnown RBP26.59■■□□□ 1.85
Msh3-205ENSMUST00000187424 Slx4Q6P1D7 1565 aa26.58■■□□□ 1.85
Msh3-205ENSMUST00000187424 Ttc37F8VPK0 1563 aa26.54■■□□□ 1.84
Msh3-205ENSMUST00000187424 AdgbG3UZ78 1657 aa26.54■■□□□ 1.84
Msh3-205ENSMUST00000187424 Ppp1r18Q8BQ30 594 aa26.51■■□□□ 1.83
Msh3-205ENSMUST00000187424 Mapkbp1Q6NS57 1503 aa26.49■■□□□ 1.83
Msh3-205ENSMUST00000187424 Arhgap27A2AB59 869 aa26.48■■□□□ 1.83
Msh3-205ENSMUST00000187424 Alpk3Q924C5 1678 aa26.44■■□□□ 1.82
Msh3-205ENSMUST00000187424 Mroh2bQ7M6Y6 1581 aa26.43■■□□□ 1.82
Msh3-205ENSMUST00000187424 Arhgef11Q68FM7 1552 aa26.4■■□□□ 1.82
Msh3-205ENSMUST00000187424 Plekhg3Q4VAC9 1341 aa26.39■■□□□ 1.82
Msh3-205ENSMUST00000187424 Gab3Q8BSM5 595 aa26.36■■□□□ 1.81
Msh3-205ENSMUST00000187424 Npm2Q80W85 207 aa26.35■■□□□ 1.81
Msh3-205ENSMUST00000187424 Zeb1Q64318 1117 aa26.33■■□□□ 1.81
Msh3-205ENSMUST00000187424 Lrrc9Q8CDN9 1456 aa26.33■■□□□ 1.81
Msh3-205ENSMUST00000187424 Arhgap35Q91YM2 1499 aa26.3■■□□□ 1.8
Msh3-205ENSMUST00000187424 Depdc5P61460 1591 aa26.29■■□□□ 1.8
Msh3-205ENSMUST00000187424 Abca5Q8K448 1642 aa26.28■■□□□ 1.8
Msh3-205ENSMUST00000187424 Jph4Q80WT0 628 aa26.27■■□□□ 1.8
Msh3-205ENSMUST00000187424 Zfyve16Q80U44 1528 aa26.25■■□□□ 1.79
Msh3-205ENSMUST00000187424 Map3k1P53349 1493 aa26.24■■□□□ 1.79
Msh3-205ENSMUST00000187424 Kdm5bQ80Y84 1544 aa26.22■■□□□ 1.79
Msh3-205ENSMUST00000187424 Gm7298A0A0N4SVU1 1476 aa26.2■■□□□ 1.78
Msh3-205ENSMUST00000187424 Znf608Q56A10 1511 aa26.19■■□□□ 1.78
Msh3-205ENSMUST00000187424 Carmil1Q6EDY6 1374 aa26.19■■□□□ 1.78
Msh3-205ENSMUST00000187424 Fndc1E9Q043 1732 aa26.18■■□□□ 1.78
Msh3-205ENSMUST00000187424 Cep162Q6ZQ06 1403 aa26.18■■□□□ 1.78
Msh3-205ENSMUST00000187424 Rpap1Q80TE0 1409 aa26.18■■□□□ 1.78
Msh3-205ENSMUST00000187424 Rrbp1Q99PL5 1605 aaKnown RBP26.17■■□□□ 1.78
Msh3-205ENSMUST00000187424 Ifnlr1Q8CGK5 535 aa26.14■■□□□ 1.78
Msh3-205ENSMUST00000187424 Igf1rQ60751 1373 aa26.14■■□□□ 1.78
Msh3-205ENSMUST00000187424 Dnajc5gQ8C632 165 aa26.1■■□□□ 1.77
Msh3-205ENSMUST00000187424 Cul7Q8VE73 1689 aa26.09■■□□□ 1.77
Msh3-205ENSMUST00000187424 Wdr7Q920I9 1489 aa26.08■■□□□ 1.77
Msh3-205ENSMUST00000187424 Arid3cA6PWV5 409 aa26.07■■□□□ 1.76
Msh3-205ENSMUST00000187424 NhsB1AV60 1647 aa26.06■■□□□ 1.76
Msh3-205ENSMUST00000187424 AglF8VPN4 1532 aa26.04■■□□□ 1.76
Msh3-205ENSMUST00000187424 WrnO09053 1401 aa26.01■■□□□ 1.75
Msh3-205ENSMUST00000187424 Clip1Q922J3 1391 aa26■■□□□ 1.75
Msh3-205ENSMUST00000187424 Polr1aO35134 1717 aaKnown RBP26■■□□□ 1.75
Msh3-205ENSMUST00000187424 Cux1P53564 1515 aa25.98■■□□□ 1.75
Msh3-205ENSMUST00000187424 Fkbp15Q6P9Q6 1216 aaKnown RBP25.96■■□□□ 1.75
Msh3-205ENSMUST00000187424 Myt1lP97500 1187 aa25.9■■□□□ 1.74
Msh3-205ENSMUST00000187424 Brwd3A2AHJ4 1799 aa25.9■■□□□ 1.74
Msh3-205ENSMUST00000187424 Rnf17Q99MV7 1640 aa25.86■■□□□ 1.73
Msh3-205ENSMUST00000187424 Atp10dQ8K2X1 1416 aa25.85■■□□□ 1.73
Msh3-205ENSMUST00000187424 Fyco1Q8VDC1 1437 aa25.82■■□□□ 1.72
Msh3-205ENSMUST00000187424 Ankrd26Q811D2 1581 aa25.82■■□□□ 1.72
Msh3-205ENSMUST00000187424 Arhgap31A6X8Z5 1425 aa25.81■■□□□ 1.72
Msh3-205ENSMUST00000187424 Mroh2aD3Z750 1679 aa25.8■■□□□ 1.72
Msh3-205ENSMUST00000187424 Gcc2Q8CHG3 1679 aa25.8■■□□□ 1.72
Msh3-205ENSMUST00000187424 Kdm6bQ5NCY0 1641 aa25.79■■□□□ 1.72
Msh3-205ENSMUST00000187424 Kiaa1210E9Q0C6 1637 aa25.78■■□□□ 1.72
Msh3-205ENSMUST00000187424 Ccdc141E9Q8Q6 1531 aa25.78■■□□□ 1.72
Msh3-205ENSMUST00000187424 Abca8bQ8K440 1620 aa25.77■■□□□ 1.72
Msh3-205ENSMUST00000187424 Plppr3Q7TPB0 716 aa25.76■■□□□ 1.71
Msh3-205ENSMUST00000187424 Ercc6l2Q9JIM3 1537 aa25.73■■□□□ 1.71
Msh3-205ENSMUST00000187424 MlecQ6ZQI3 291 aaKnown RBP25.66■■□□□ 1.7
Msh3-205ENSMUST00000187424 Hecw2Q6I6G8 1578 aa25.65■■□□□ 1.7
Msh3-205ENSMUST00000187424 Erich3F6QRE9 1637 aa25.65■■□□□ 1.7
Msh3-205ENSMUST00000187424 A2mQ6GQT1 1474 aa25.65■■□□□ 1.7
Msh3-205ENSMUST00000187424 BlmO88700 1416 aa25.64■■□□□ 1.7
Msh3-205ENSMUST00000187424 Naip2Q9QUK4 1447 aa25.64■■□□□ 1.7
Msh3-205ENSMUST00000187424 Cyb5rlB1AS42 316 aa25.62■■□□□ 1.69
Msh3-205ENSMUST00000187424 Fancd2Q80V62 1450 aa25.61■■□□□ 1.69
Msh3-205ENSMUST00000187424 Lmo7E9PYF4 1699 aaKnown RBP25.59■■□□□ 1.69
Msh3-205ENSMUST00000187424 Setd5Q5XJV7 1441 aa25.57■■□□□ 1.68
Msh3-205ENSMUST00000187424 Rapgef6Q5NCJ1 1609 aa25.57■■□□□ 1.68
Msh3-205ENSMUST00000187424 Kiaa0556Q8C753 1610 aa25.56■■□□□ 1.68
Msh3-205ENSMUST00000187424 Qser1A2BIE1 1698 aa25.55■■□□□ 1.68
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms