RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Carmil1Q6EDY6 1374 aa21.75■■□□□ 1.07
Rnf4-207ENSMUST00000182709 AqrQ8CFQ3 1481 aaKnown RBP21.72■■□□□ 1.07
Rnf4-207ENSMUST00000182709 Crocc2F6XLV1 1638 aa21.72■■□□□ 1.07
Rnf4-207ENSMUST00000182709 Cux1P53564 1515 aa21.71■■□□□ 1.07
Rnf4-207ENSMUST00000182709 Fam50aQ9WV03 339 aaKnown RBP21.69■■□□□ 1.06
Rnf4-207ENSMUST00000182709 Aebp1Q640N1 1128 aa21.67■■□□□ 1.06
Rnf4-207ENSMUST00000182709 Urb2E9Q7L1 1524 aaKnown RBP21.66■■□□□ 1.06
Rnf4-207ENSMUST00000182709 Arhgef5E9Q7D5 1581 aa21.66■■□□□ 1.06
Rnf4-207ENSMUST00000182709 Ankrd26Q811D2 1581 aa21.65■■□□□ 1.06
Rnf4-207ENSMUST00000182709 SynmQ70IV5 1561 aa21.64■■□□□ 1.05
Rnf4-207ENSMUST00000182709 Eid3Q3V124 375 aa21.62■■□□□ 1.05
Rnf4-207ENSMUST00000182709 Naip1Q9QWK5 1403 aa21.6■■□□□ 1.05
Rnf4-207ENSMUST00000182709 Rpap1Q80TE0 1409 aa21.57■■□□□ 1.04
Rnf4-207ENSMUST00000182709 Ppargc1bQ8VHJ7 1014 aa21.56■■□□□ 1.04
Rnf4-207ENSMUST00000182709 Pcf11G3X9Z4 1553 aa21.56■■□□□ 1.04
Rnf4-207ENSMUST00000182709 Las1lA2BE28 776 aaKnown RBP21.55■■□□□ 1.04
Rnf4-207ENSMUST00000182709 Arhgap27A2AB59 869 aa21.55■■□□□ 1.04
Rnf4-207ENSMUST00000182709 Pla2r1Q62028 1487 aa21.52■■□□□ 1.04
Rnf4-207ENSMUST00000182709 Disp1Q3TDN0 1521 aa21.52■■□□□ 1.04
Rnf4-207ENSMUST00000182709 Fyco1Q8VDC1 1437 aa21.51■■□□□ 1.03
Rnf4-207ENSMUST00000182709 EprsQ8CGC7 1512 aaKnown RBP21.51■■□□□ 1.03
Rnf4-207ENSMUST00000182709 Grin2aP35436 1464 aa21.51■■□□□ 1.03
Rnf4-207ENSMUST00000182709 Tiam1Q60610 1591 aa21.5■■□□□ 1.03
Rnf4-207ENSMUST00000182709 Slx4Q6P1D7 1565 aa21.5■■□□□ 1.03
Rnf4-207ENSMUST00000182709 Wdr66E9Q743 1299 aa21.49■■□□□ 1.03
Rnf4-207ENSMUST00000182709 Magi3Q9EQJ9 1476 aa21.48■■□□□ 1.03
Rnf4-207ENSMUST00000182709 Ncapd3Q6ZQK0 1506 aa21.47■■□□□ 1.03
Rnf4-207ENSMUST00000182709 CntlnA2AM05 1397 aa21.46■■□□□ 1.03
Rnf4-207ENSMUST00000182709 CadpsQ80TJ1 1355 aa21.46■■□□□ 1.03
Rnf4-207ENSMUST00000182709 Fkbp15Q6P9Q6 1216 aaKnown RBP21.46■■□□□ 1.03
Rnf4-207ENSMUST00000182709 Ube2uB1AUC4 352 aa21.44■■□□□ 1.02
Rnf4-207ENSMUST00000182709 Chic2Q9D9G3 165 aa21.42■■□□□ 1.02
Rnf4-207ENSMUST00000182709 Erich3F6QRE9 1637 aa21.41■■□□□ 1.02
Rnf4-207ENSMUST00000182709 Gm7298A0A0N4SVU1 1476 aa21.4■■□□□ 1.02
Rnf4-207ENSMUST00000182709 Aebp2Q9Z248 504 aaKnown RBP21.38■■□□□ 1.01
Rnf4-207ENSMUST00000182709 TonslQ6NZL6 1363 aa21.38■■□□□ 1.01
Rnf4-207ENSMUST00000182709 Kif27Q7M6Z4 1394 aa21.37■■□□□ 1.01
Rnf4-207ENSMUST00000182709 PxdnQ3UQ28 1475 aa21.36■■□□□ 1.01
Rnf4-207ENSMUST00000182709 Lmo7E9PYF4 1699 aaKnown RBP21.36■■□□□ 1.01
Rnf4-207ENSMUST00000182709 WizO88286 1684 aaKnown RBP21.35■■□□□ 1.01
Rnf4-207ENSMUST00000182709 Lrriq1Q0P5X1 1673 aa21.34■■□□□ 1.01
Rnf4-207ENSMUST00000182709 WrnO09053 1401 aa21.34■■□□□ 1.01
Rnf4-207ENSMUST00000182709 Polr1aO35134 1717 aaKnown RBP21.34■■□□□ 1.01
Rnf4-207ENSMUST00000182709 Sall2Q9QX96 1004 aa21.33■■□□□ 1.01
Rnf4-207ENSMUST00000182709 Ift140E9PY46 1464 aa21.32■■□□□ 1
Rnf4-207ENSMUST00000182709 Gpatch8A2A6A1 1505 aa21.32■■□□□ 1
Rnf4-207ENSMUST00000182709 1700123L14RikQ3V2K7 440 aa21.28■■□□□ 1
Rnf4-207ENSMUST00000182709 3425401B19RikD3Z1D3 1412 aa21.27■■□□□ 1
Rnf4-207ENSMUST00000182709 Gm1043A0A140LJC2 1431 aa21.27■■□□□ 1
Rnf4-207ENSMUST00000182709 Setd1bQ8CFT2 1985 aa21.26■□□□□ 0.99
Rnf4-207ENSMUST00000182709 Ccnb3Q810T2 1396 aa21.25■□□□□ 0.99
Rnf4-207ENSMUST00000182709 Nup160Q9Z0W3 1402 aaKnown RBP21.23■□□□□ 0.99
Rnf4-207ENSMUST00000182709 Csrnp3P59055 597 aa21.2■□□□□ 0.98
Rnf4-207ENSMUST00000182709 Anks4bQ8K3X6 423 aa21.19■□□□□ 0.98
Rnf4-207ENSMUST00000182709 Ifnlr1Q8CGK5 535 aa21.18■□□□□ 0.98
Rnf4-207ENSMUST00000182709 Soga1E1U8D0 1418 aa21.17■□□□□ 0.98
Rnf4-207ENSMUST00000182709 AknaQ80VW7 1404 aa21.17■□□□□ 0.98
Rnf4-207ENSMUST00000182709 TchhA0A0B4J1F9 1599 aa21.16■□□□□ 0.98
Rnf4-207ENSMUST00000182709 Adamts12Q811B3 1600 aa21.16■□□□□ 0.98
Rnf4-207ENSMUST00000182709 Abca5Q8K448 1642 aa21.15■□□□□ 0.98
Rnf4-207ENSMUST00000182709 Cc2d2bA0A286YDU8 1405 aa21.15■□□□□ 0.98
Rnf4-207ENSMUST00000182709 Abca16E9PWJ7 1678 aa21.11■□□□□ 0.97
Rnf4-207ENSMUST00000182709 BC005561E9Q5E2 1589 aa21.1■□□□□ 0.97
Rnf4-207ENSMUST00000182709 Cabp1Q9JLK7 227 aa21.07■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Ncoa3O09000 1398 aa21.07■□□□□ 0.96
Rnf4-207ENSMUST00000182709 NexmifQ5DTT1 1515 aa21.06■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Arhgap31A6X8Z5 1425 aa21.05■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Hspa5P20029 655 aaKnown RBP21.05■□□□□ 0.96
Rnf4-207ENSMUST00000182709 A2mQ6GQT1 1474 aa21.04■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Shroom2A2ALU4 1481 aa21.04■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Kdm5bQ80Y84 1544 aa21.04■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Abcc2Q8VI47 1543 aa21.03■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Zbtb7cQ8VCZ7 619 aa21.03■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Mapk8ip2Q9ERE9 830 aa21.02■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Peg3Q3URU2 1571 aa21.02■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Neo1P97798 1493 aa21.02■□□□□ 0.96
Rnf4-207ENSMUST00000182709 Jph4Q80WT0 628 aa21■□□□□ 0.95
Rnf4-207ENSMUST00000182709 Pelp1Q9DBD5 1123 aaKnown RBP21■□□□□ 0.95
Rnf4-207ENSMUST00000182709 Mug1P28665 1476 aa21■□□□□ 0.95
Rnf4-207ENSMUST00000182709 NclP09405 707 aaKnown RBP20.99■□□□□ 0.95
Rnf4-207ENSMUST00000182709 Naip2Q9QUK4 1447 aa20.98■□□□□ 0.95
Rnf4-207ENSMUST00000182709 Zfp644E9QA22 1323 aa20.97■□□□□ 0.95
Rnf4-207ENSMUST00000182709 Rusc2Q80U22 1514 aa20.97■□□□□ 0.95
Rnf4-207ENSMUST00000182709 Mia2Q91ZV0 1396 aa20.96■□□□□ 0.95
Rnf4-207ENSMUST00000182709 Pbrm1Q8BSQ9 1634 aaKnown RBP20.95■□□□□ 0.94
Rnf4-207ENSMUST00000182709 ClspnQ80YR7 1315 aa20.92■□□□□ 0.94
Rnf4-207ENSMUST00000182709 CenpbP27790 599 aa20.91■□□□□ 0.94
Rnf4-207ENSMUST00000182709 Fhad1A6PWD2 1420 aa20.9■□□□□ 0.94
Rnf4-207ENSMUST00000182709 Lmtk2Q3TYD6 1471 aa20.89■□□□□ 0.94
Rnf4-207ENSMUST00000182709 Fgd6Q69ZL1 1399 aa20.89■□□□□ 0.94
Rnf4-207ENSMUST00000182709 Rapgef6Q5NCJ1 1609 aa20.89■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Arhgef40Q3UPH7 1517 aa20.88■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Tdrd9Q14BI7 1383 aa20.86■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Mtus2Q3UHD3 1353 aa20.85■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Eif4g3Q80XI3 1579 aaKnown RBP20.85■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Vps8Q0P5W1 1427 aa20.85■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Abcc5Q9R1X5 1436 aa20.84■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Ccer2J3QPU5 274 aa20.84■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Cdk11bP24788 784 aaKnown RBP20.84■□□□□ 0.93
Rnf4-207ENSMUST00000182709 Mphosph9A6H5Y1 991 aa20.83■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms