RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Ankrd26Q811D2 1581 aa20.29■□□□□ 0.84
Rnf4-204ENSMUST00000182047 Plb1Q3TTY0 1478 aa20.26■□□□□ 0.83
Rnf4-204ENSMUST00000182047 Cux1P53564 1515 aa20.26■□□□□ 0.83
Rnf4-204ENSMUST00000182047 Arhgef5E9Q7D5 1581 aa20.25■□□□□ 0.83
Rnf4-204ENSMUST00000182047 Erich3F6QRE9 1637 aa20.2■□□□□ 0.82
Rnf4-204ENSMUST00000182047 Urb2E9Q7L1 1524 aaKnown RBP20.2■□□□□ 0.82
Rnf4-204ENSMUST00000182047 Pcf11G3X9Z4 1553 aa20.17■□□□□ 0.82
Rnf4-204ENSMUST00000182047 Pla2r1Q62028 1487 aa20.15■□□□□ 0.82
Rnf4-204ENSMUST00000182047 Magi3Q9EQJ9 1476 aa20.14■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Tiam1Q60610 1591 aa20.12■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Disp1Q3TDN0 1521 aa20.12■□□□□ 0.81
Rnf4-204ENSMUST00000182047 NefmP08553 848 aa20.12■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Sall2Q9QX96 1004 aa20.12■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Naip1Q9QWK5 1403 aa20.11■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Lmo7E9PYF4 1699 aaKnown RBP20.1■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Grin2aP35436 1464 aa20.1■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Slx4Q6P1D7 1565 aa20.09■□□□□ 0.81
Rnf4-204ENSMUST00000182047 BlmO88700 1416 aa20.08■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Fyco1Q8VDC1 1437 aa20.08■□□□□ 0.81
Rnf4-204ENSMUST00000182047 Lmod2Q3UHZ5 550 aa20.08■□□□□ 0.8
Rnf4-204ENSMUST00000182047 EprsQ8CGC7 1512 aaKnown RBP20.08■□□□□ 0.8
Rnf4-204ENSMUST00000182047 Lrriq1Q0P5X1 1673 aa20.06■□□□□ 0.8
Rnf4-204ENSMUST00000182047 Polr1aO35134 1717 aaKnown RBP20.04■□□□□ 0.8
Rnf4-204ENSMUST00000182047 Setd1bQ8CFT2 1985 aa20.04■□□□□ 0.8
Rnf4-204ENSMUST00000182047 Aebp1Q640N1 1128 aa20.03■□□□□ 0.8
Rnf4-204ENSMUST00000182047 Ncapd3Q6ZQK0 1506 aa20.03■□□□□ 0.8
Rnf4-204ENSMUST00000182047 CadpsQ80TJ1 1355 aa19.99■□□□□ 0.79
Rnf4-204ENSMUST00000182047 CntlnA2AM05 1397 aa19.99■□□□□ 0.79
Rnf4-204ENSMUST00000182047 Ift140E9PY46 1464 aa19.99■□□□□ 0.79
Rnf4-204ENSMUST00000182047 WizO88286 1684 aaKnown RBP19.97■□□□□ 0.79
Rnf4-204ENSMUST00000182047 Rpap1Q80TE0 1409 aa19.97■□□□□ 0.79
Rnf4-204ENSMUST00000182047 Wdr66E9Q743 1299 aa19.96■□□□□ 0.79
Rnf4-204ENSMUST00000182047 Gm7298A0A0N4SVU1 1476 aa19.95■□□□□ 0.78
Rnf4-204ENSMUST00000182047 Ppargc1bQ8VHJ7 1014 aa19.93■□□□□ 0.78
Rnf4-204ENSMUST00000182047 Nup160Q9Z0W3 1402 aaKnown RBP19.93■□□□□ 0.78
Rnf4-204ENSMUST00000182047 PxdnQ3UQ28 1475 aa19.92■□□□□ 0.78
Rnf4-204ENSMUST00000182047 Adamts12Q811B3 1600 aa19.91■□□□□ 0.78
Rnf4-204ENSMUST00000182047 Abca5Q8K448 1642 aa19.91■□□□□ 0.78
Rnf4-204ENSMUST00000182047 Gpatch8A2A6A1 1505 aa19.9■□□□□ 0.78
Rnf4-204ENSMUST00000182047 Gm1043A0A140LJC2 1431 aa19.87■□□□□ 0.77
Rnf4-204ENSMUST00000182047 Peg3Q3URU2 1571 aa19.86■□□□□ 0.77
Rnf4-204ENSMUST00000182047 Abca16E9PWJ7 1678 aa19.85■□□□□ 0.77
Rnf4-204ENSMUST00000182047 Pbrm1Q8BSQ9 1634 aaKnown RBP19.84■□□□□ 0.77
Rnf4-204ENSMUST00000182047 TchhA0A0B4J1F9 1599 aa19.83■□□□□ 0.77
Rnf4-204ENSMUST00000182047 Arhgap27A2AB59 869 aa19.82■□□□□ 0.76
Rnf4-204ENSMUST00000182047 Soga1E1U8D0 1418 aa19.82■□□□□ 0.76
Rnf4-204ENSMUST00000182047 Aebp2Q9Z248 504 aaKnown RBP19.81■□□□□ 0.76
Rnf4-204ENSMUST00000182047 Kif27Q7M6Z4 1394 aa19.8■□□□□ 0.76
Rnf4-204ENSMUST00000182047 3425401B19RikD3Z1D3 1412 aa19.8■□□□□ 0.76
Rnf4-204ENSMUST00000182047 Cc2d2bA0A286YDU8 1405 aa19.79■□□□□ 0.76
Rnf4-204ENSMUST00000182047 Fam50aQ9WV03 339 aaKnown RBP19.78■□□□□ 0.76
Rnf4-204ENSMUST00000182047 WrnO09053 1401 aa19.77■□□□□ 0.76
Rnf4-204ENSMUST00000182047 Las1lA2BE28 776 aaKnown RBP19.76■□□□□ 0.75
Rnf4-204ENSMUST00000182047 Kdm5bQ80Y84 1544 aa19.75■□□□□ 0.75
Rnf4-204ENSMUST00000182047 Abcc2Q8VI47 1543 aa19.75■□□□□ 0.75
Rnf4-204ENSMUST00000182047 Csrnp3P59055 597 aa19.73■□□□□ 0.75
Rnf4-204ENSMUST00000182047 Rusc2Q80U22 1514 aa19.72■□□□□ 0.75
Rnf4-204ENSMUST00000182047 Eid3Q3V124 375 aa19.69■□□□□ 0.74
Rnf4-204ENSMUST00000182047 Ccnb3Q810T2 1396 aa19.69■□□□□ 0.74
Rnf4-204ENSMUST00000182047 Eif4g3Q80XI3 1579 aaKnown RBP19.68■□□□□ 0.74
Rnf4-204ENSMUST00000182047 BC005561E9Q5E2 1589 aa19.68■□□□□ 0.74
Rnf4-204ENSMUST00000182047 Shroom2A2ALU4 1481 aa19.67■□□□□ 0.74
Rnf4-204ENSMUST00000182047 NexmifQ5DTT1 1515 aa19.64■□□□□ 0.74
Rnf4-204ENSMUST00000182047 1700123L14RikQ3V2K7 440 aa19.63■□□□□ 0.73
Rnf4-204ENSMUST00000182047 Anks4bQ8K3X6 423 aa19.63■□□□□ 0.73
Rnf4-204ENSMUST00000182047 TonslQ6NZL6 1363 aa19.62■□□□□ 0.73
Rnf4-204ENSMUST00000182047 Lmtk2Q3TYD6 1471 aa19.62■□□□□ 0.73
Rnf4-204ENSMUST00000182047 Ncoa3O09000 1398 aa19.6■□□□□ 0.73
Rnf4-204ENSMUST00000182047 A2mQ6GQT1 1474 aa19.59■□□□□ 0.73
Rnf4-204ENSMUST00000182047 Rapgef6Q5NCJ1 1609 aa19.58■□□□□ 0.73
Rnf4-204ENSMUST00000182047 Chic2Q9D9G3 165 aa19.58■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Mug1P28665 1476 aa19.57■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Nop58Q6DFW4 536 aaKnown RBP19.56■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Arhgap31A6X8Z5 1425 aa19.56■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Naip2Q9QUK4 1447 aa19.56■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Cdk11bP24788 784 aaKnown RBP19.55■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Neo1P97798 1493 aa19.54■□□□□ 0.72
Rnf4-204ENSMUST00000182047 AknaQ80VW7 1404 aa19.54■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Map3k4O08648 1597 aa19.53■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Fkbp15Q6P9Q6 1216 aaKnown RBP19.53■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Dnmt1P13864 1620 aaKnown RBP19.53■□□□□ 0.72
Rnf4-204ENSMUST00000182047 Gcc2Q8CHG3 1679 aa19.52■□□□□ 0.71
Rnf4-204ENSMUST00000182047 Zcchc11B2RX14 1644 aaKnown RBP19.51■□□□□ 0.71
Rnf4-204ENSMUST00000182047 Arhgef11Q68FM7 1552 aa19.51■□□□□ 0.71
Rnf4-204ENSMUST00000182047 ClspnQ80YR7 1315 aa19.5■□□□□ 0.71
Rnf4-204ENSMUST00000182047 Fhad1A6PWD2 1420 aa19.5■□□□□ 0.71
Rnf4-204ENSMUST00000182047 Mia2Q91ZV0 1396 aa19.49■□□□□ 0.71
Rnf4-204ENSMUST00000182047 Gm38655A0A286YDK6 273 aa19.48■□□□□ 0.71
Rnf4-204ENSMUST00000182047 Fgd6Q69ZL1 1399 aa19.47■□□□□ 0.71
Rnf4-204ENSMUST00000182047 Vps8Q0P5W1 1427 aa19.46■□□□□ 0.71
Rnf4-204ENSMUST00000182047 Mroh2aD3Z750 1679 aa19.45■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Jph4Q80WT0 628 aa19.45■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Arhgef40Q3UPH7 1517 aa19.45■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Cdc42bpaQ3UU96 1719 aa19.44■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Ccdc141E9Q8Q6 1531 aa19.44■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Ube2uB1AUC4 352 aa19.42■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Arhgef12Q8R4H2 1543 aaKnown RBP19.41■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Magi1Q6RHR9 1471 aa19.41■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Kiaa1551Q5DTW7 1521 aa19.41■□□□□ 0.7
Rnf4-204ENSMUST00000182047 Dennd4bQ3U1Y4 1499 aa19.4■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms