RNA–Protein interactions for RNA: ENSMUST00000115658.5

Pcdha11-201, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-201ENSMUST00000115658 Htatsf1Q8BGC0 757 aa18.44■□□□□ 0.54
Pcdha11-201ENSMUST00000115658 Polr3glQ8R0C0 218 aa18.43■□□□□ 0.54
Pcdha11-201ENSMUST00000115658 P3h3Q8CG70 732 aa18.42■□□□□ 0.54
Pcdha11-201ENSMUST00000115658 Zbtb7cQ8VCZ7 619 aa18.4■□□□□ 0.54
Pcdha11-201ENSMUST00000115658 Rad21Q61550 635 aaKnown RBP18.39■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Gm35339A0A140LHH9 1649 aa18.37■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Ipo9Q91YE6 1041 aa18.36■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Tnnt2P50752 301 aa18.36■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Ppm1gQ61074 542 aa18.36■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Vsig10D3YX43 558 aa18.34■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Trim30dE9PWL0 497 aa18.34■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Ofd1Q80Z25 1017 aa18.34■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Zbtb4Q5F293 982 aa18.34■□□□□ 0.53
Pcdha11-201ENSMUST00000115658 Taok2Q6ZQ29 1240 aa18.29■□□□□ 0.52
Pcdha11-201ENSMUST00000115658 Nolc1E9Q5C9 702 aaKnown RBP18.27■□□□□ 0.51
Pcdha11-201ENSMUST00000115658 PtmaP26350 111 aa18.26■□□□□ 0.51
Pcdha11-201ENSMUST00000115658 Tcerg1Q8CGF7 1100 aaKnown RBP18.26■□□□□ 0.51
Pcdha11-201ENSMUST00000115658 Dnttip2Q8R2M2 758 aaKnown RBP18.26■□□□□ 0.51
Pcdha11-201ENSMUST00000115658 Brd4Q9ESU6 1400 aaKnown RBP18.25■□□□□ 0.51
Pcdha11-201ENSMUST00000115658 Plcb2A3KGF7 1181 aa18.23■□□□□ 0.51
Pcdha11-201ENSMUST00000115658 Slc4a3P16283 1227 aa18.22■□□□□ 0.51
Pcdha11-201ENSMUST00000115658 Ifnlr1Q8CGK5 535 aa18.2■□□□□ 0.5
Pcdha11-201ENSMUST00000115658 Spryd3E9Q9B3 442 aa18.18■□□□□ 0.5
Pcdha11-201ENSMUST00000115658 Rrp12Q6P5B0 1295 aaKnown RBP18.11■□□□□ 0.49
Pcdha11-201ENSMUST00000115658 Plcd4Q8K3R3 807 aa18.11■□□□□ 0.49
Pcdha11-201ENSMUST00000115658 Dnai1Q8C0M8 701 aa18.1■□□□□ 0.49
Pcdha11-201ENSMUST00000115658 Arid4bA2CG63 1314 aaKnown RBP18.08■□□□□ 0.49
Pcdha11-201ENSMUST00000115658 Prdm10Q3UTQ7 1184 aa18.08■□□□□ 0.49
Pcdha11-201ENSMUST00000115658 B4galnt3Q6L8S8 986 aa18.08■□□□□ 0.49
Pcdha11-201ENSMUST00000115658 Dbr1Q923B1 550 aa18.08■□□□□ 0.48
Pcdha11-201ENSMUST00000115658 Gm13697A2AK42 830 aa18.07■□□□□ 0.48
Pcdha11-201ENSMUST00000115658 Rb1cc1Q9ESK9 1588 aa18.07■□□□□ 0.48
Pcdha11-201ENSMUST00000115658 BlmO88700 1416 aa18.04■□□□□ 0.48
Pcdha11-201ENSMUST00000115658 Mbd3Q9Z2D8 285 aaKnown RBP18.01■□□□□ 0.47
Pcdha11-201ENSMUST00000115658 Adam1bQ8R534 806 aa18.01■□□□□ 0.47
Pcdha11-201ENSMUST00000115658 Rtn4Q99P72 1162 aaKnown RBP18.01■□□□□ 0.47
Pcdha11-201ENSMUST00000115658 Rangap1P46061 589 aaKnown RBP18■□□□□ 0.47
Pcdha11-201ENSMUST00000115658 Erich6bQ9D4S6 220 aa18■□□□□ 0.47
Pcdha11-201ENSMUST00000115658 Chic2Q9D9G3 165 aa17.99■□□□□ 0.47
Pcdha11-201ENSMUST00000115658 4933402E13RikQ9D4D2 429 aa17.96■□□□□ 0.47
Pcdha11-201ENSMUST00000115658 MsnP26041 577 aaKnown RBP17.95■□□□□ 0.46
Pcdha11-201ENSMUST00000115658 Apbb1Q9QXJ1 710 aa17.95■□□□□ 0.46
Pcdha11-201ENSMUST00000115658 Znf316Q6PGE4 1016 aa17.94■□□□□ 0.46
Pcdha11-201ENSMUST00000115658 Pdcl3Q8BVF2 240 aa17.94■□□□□ 0.46
Pcdha11-201ENSMUST00000115658 ChgaP26339 463 aaKnown RBP17.94■□□□□ 0.46
Pcdha11-201ENSMUST00000115658 Erich6D3Z6S9 713 aa17.93■□□□□ 0.46
Pcdha11-201ENSMUST00000115658 Ddrgk1Q80WW9 315 aa17.92■□□□□ 0.46
Pcdha11-201ENSMUST00000115658 EspnQ9ET47 871 aa17.9■□□□□ 0.46
Pcdha11-201ENSMUST00000115658 Ipo4Q8VI75 1082 aa17.89■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Setd5Q5XJV7 1441 aa17.89■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Rsf1E9PWW9 1441 aaKnown RBP17.88■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Wwc2Q6NXJ0 1187 aa17.88■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Trim26Q99PN3 545 aa17.87■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Cwc22Q8C5N3 908 aaKnown RBP17.87■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Map7O88735 730 aa17.86■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Chmp5Q9D7S9 219 aa17.86■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Golga3P55937 1487 aa17.84■□□□□ 0.45
Pcdha11-201ENSMUST00000115658 Ipo8Q7TMY7 1010 aa17.82■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 VgfQ0VGU4 617 aa17.81■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Mre11Q61216 706 aa17.81■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Npm1Q61937 292 aaKnown RBP17.8■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Rgl3Q3UYI5 709 aa17.8■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Casc1Q6TDU8 730 aa17.8■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Rwdd1Q9CQK7 243 aa17.8■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Exoc6Q8R313 802 aa17.8■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Armcx1Q9CX83 456 aa17.79■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Eea1Q8BL66 1411 aa17.77■□□□□ 0.44
Pcdha11-201ENSMUST00000115658 Hspa5P20029 655 aaKnown RBP17.76■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Fgd1P52734 960 aa17.76■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Rrp9Q91WM3 475 aaKnown RBP17.76■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Card11Q8CIS0 1159 aa17.76■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Fbxo2Q80UW2 297 aa17.75■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 SlkO54988 1233 aa17.75■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Neurod2Q62414 383 aa17.75■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Becn1O88597 448 aa17.73■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Baz1aO88379 1555 aa17.73■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Gm13695A2AK44 830 aa17.73■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Mia2Q91ZV0 1396 aa17.73■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 IbspQ61711 324 aa17.72■□□□□ 0.43
Pcdha11-201ENSMUST00000115658 Map7d2A2AG50 781 aa17.7■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Znf326O88291 580 aa17.7■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 KnstrnQ9D9Z1 312 aaKnown RBP17.68■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Ush1cQ9ES64 910 aa17.68■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Sin3aQ60520 1274 aaKnown RBP17.68■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Mapk8ip3Q9ESN9 1337 aa17.68■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Fhad1A6PWD2 1420 aa17.68■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Gtf2a1Q99PM3 378 aa17.67■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Smg6P61406 1418 aaKnown RBP17.67■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Kiaa0754Q69ZZ9 979 aa17.67■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Sart3Q9JLI8 962 aaKnown RBP17.67■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Gm6268A2A3U9 297 aa17.66■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Atp1b4Q99ME6 356 aa17.66■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 PtmsQ9D0J8 101 aaKnown RBP17.66■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 BccipQ9CWI3 316 aa17.65■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Znf710Q3U288 666 aa17.64■□□□□ 0.42
Pcdha11-201ENSMUST00000115658 Calcoco2A2A6M5 331 aa17.64■□□□□ 0.41
Pcdha11-201ENSMUST00000115658 CntlnA2AM05 1397 aa17.64■□□□□ 0.41
Pcdha11-201ENSMUST00000115658 Grwd1Q810D6 446 aaKnown RBP17.61■□□□□ 0.41
Pcdha11-201ENSMUST00000115658 Gm973E9Q295 1059 aa17.61■□□□□ 0.41
Pcdha11-201ENSMUST00000115658 Pak3Q61036 559 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms