RNA–Protein interactions for RNA: ENSMUST00000115658.5

Pcdha11-201, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-201ENSMUST00000115658 Rpgrip1Q9EPQ2 1331 aa23.64■■□□□ 1.38
Pcdha11-201ENSMUST00000115658 Rhox8Q6VSS7 320 aa23.48■■□□□ 1.35
Pcdha11-201ENSMUST00000115658 Las1lA2BE28 776 aaKnown RBP22.79■■□□□ 1.24
Pcdha11-201ENSMUST00000115658 Cngb1E1AZ71 1325 aa22.37■■□□□ 1.17
Pcdha11-201ENSMUST00000115658 Ehmt2Q9Z148 1263 aaKnown RBP22.29■■□□□ 1.16
Pcdha11-201ENSMUST00000115658 Acin1Q9JIX8 1338 aaKnown RBP21.79■■□□□ 1.08
Pcdha11-201ENSMUST00000115658 Pelp1Q9DBD5 1123 aaKnown RBP21.77■■□□□ 1.08
Pcdha11-201ENSMUST00000115658 CenpbP27790 599 aa21.66■■□□□ 1.06
Pcdha11-201ENSMUST00000115658 Wdr66E9Q743 1299 aa21.63■■□□□ 1.05
Pcdha11-201ENSMUST00000115658 Zeb1Q64318 1117 aa21.62■■□□□ 1.05
Pcdha11-201ENSMUST00000115658 Myt1Q8CFC2 1127 aa21.54■■□□□ 1.04
Pcdha11-201ENSMUST00000115658 Pcgf6Q99NA9 353 aa21.36■■□□□ 1.01
Pcdha11-201ENSMUST00000115658 Amer1Q7TS75 1132 aa21.11■□□□□ 0.97
Pcdha11-201ENSMUST00000115658 NefmP08553 848 aa20.98■□□□□ 0.95
Pcdha11-201ENSMUST00000115658 DiexfQ8BTT6 772 aaKnown RBP20.88■□□□□ 0.93
Pcdha11-201ENSMUST00000115658 Ccdc180J3QNE4 1664 aa20.88■□□□□ 0.93
Pcdha11-201ENSMUST00000115658 Ccdc136Q3TVA9 1136 aa20.86■□□□□ 0.93
Pcdha11-201ENSMUST00000115658 Cdk11bP24788 784 aaKnown RBP20.79■□□□□ 0.92
Pcdha11-201ENSMUST00000115658 Supt5hO55201 1082 aaKnown RBP20.74■□□□□ 0.91
Pcdha11-201ENSMUST00000115658 Trim41Q5NCC3 630 aa20.7■□□□□ 0.9
Pcdha11-201ENSMUST00000115658 Gab3Q8BSM5 595 aa20.67■□□□□ 0.9
Pcdha11-201ENSMUST00000115658 Rtl1Q7M732 1744 aa20.62■□□□□ 0.89
Pcdha11-201ENSMUST00000115658 Stra8P70278 393 aa20.62■□□□□ 0.89
Pcdha11-201ENSMUST00000115658 Ttbk1Q6PCN3 1308 aa20.57■□□□□ 0.88
Pcdha11-201ENSMUST00000115658 Nop58Q6DFW4 536 aaKnown RBP20.51■□□□□ 0.87
Pcdha11-201ENSMUST00000115658 Tnnt3Q9QZ47 272 aa20.5■□□□□ 0.87
Pcdha11-201ENSMUST00000115658 NischQ80TM9 1593 aa20.46■□□□□ 0.87
Pcdha11-201ENSMUST00000115658 HrcG5E8J6 738 aa20.41■□□□□ 0.86
Pcdha11-201ENSMUST00000115658 Rtl5Q5DTT4 599 aa20.39■□□□□ 0.85
Pcdha11-201ENSMUST00000115658 Neurod1Q60867 357 aa20.37■□□□□ 0.85
Pcdha11-201ENSMUST00000115658 Ube2uB1AUC4 352 aa20.29■□□□□ 0.84
Pcdha11-201ENSMUST00000115658 4933416C03RikQ3V063 378 aa20.29■□□□□ 0.84
Pcdha11-201ENSMUST00000115658 UbtfP25976 765 aaKnown RBP20.28■□□□□ 0.84
Pcdha11-201ENSMUST00000115658 Esf1Q3V1V3 845 aaKnown RBP20.21■□□□□ 0.83
Pcdha11-201ENSMUST00000115658 Slc24a1Q91WD8 1130 aa20.19■□□□□ 0.82
Pcdha11-201ENSMUST00000115658 Myt1lP97500 1187 aa20.1■□□□□ 0.81
Pcdha11-201ENSMUST00000115658 Csrnp3P59055 597 aa20.1■□□□□ 0.81
Pcdha11-201ENSMUST00000115658 Anks4bQ8K3X6 423 aa20.09■□□□□ 0.81
Pcdha11-201ENSMUST00000115658 Npm2Q80W85 207 aa20.08■□□□□ 0.81
Pcdha11-201ENSMUST00000115658 4930567H17RikQ3V0K5 233 aa20.07■□□□□ 0.8
Pcdha11-201ENSMUST00000115658 Aplp2Q06335 707 aa20.06■□□□□ 0.8
Pcdha11-201ENSMUST00000115658 Ppargc1bQ8VHJ7 1014 aa20.01■□□□□ 0.79
Pcdha11-201ENSMUST00000115658 Anp32aO35381 247 aa19.98■□□□□ 0.79
Pcdha11-201ENSMUST00000115658 Gm38655A0A286YDK6 273 aa19.89■□□□□ 0.78
Pcdha11-201ENSMUST00000115658 ClspnQ80YR7 1315 aa19.86■□□□□ 0.77
Pcdha11-201ENSMUST00000115658 Mier1Q5UAK0 511 aa19.84■□□□□ 0.77
Pcdha11-201ENSMUST00000115658 TonslQ6NZL6 1363 aa19.84■□□□□ 0.77
Pcdha11-201ENSMUST00000115658 Eif5bQ05D44 1216 aaKnown RBP19.8■□□□□ 0.76
Pcdha11-201ENSMUST00000115658 1700123L14RikQ3V2K7 440 aa19.77■□□□□ 0.76
Pcdha11-201ENSMUST00000115658 Sall2Q9QX96 1004 aa19.75■□□□□ 0.75
Pcdha11-201ENSMUST00000115658 Dcaf1Q80TR8 1506 aa19.73■□□□□ 0.75
Pcdha11-201ENSMUST00000115658 NrdcQ8BHG1 1161 aa19.73■□□□□ 0.75
Pcdha11-201ENSMUST00000115658 NeflP08551 543 aa19.68■□□□□ 0.74
Pcdha11-201ENSMUST00000115658 NclP09405 707 aaKnown RBP19.64■□□□□ 0.73
Pcdha11-201ENSMUST00000115658 Bcl11aQ9QYE3 773 aa19.62■□□□□ 0.73
Pcdha11-201ENSMUST00000115658 DaxxO35613 739 aa19.58■□□□□ 0.72
Pcdha11-201ENSMUST00000115658 Fam71e1A1L3C1 212 aa19.38■□□□□ 0.69
Pcdha11-201ENSMUST00000115658 Anp32bQ9EST5 272 aaKnown RBP19.37■□□□□ 0.69
Pcdha11-201ENSMUST00000115658 Ccdc9Q8VC31 543 aaKnown RBP19.37■□□□□ 0.69
Pcdha11-201ENSMUST00000115658 Mapk8ip2Q9ERE9 830 aa19.33■□□□□ 0.68
Pcdha11-201ENSMUST00000115658 Fam50aQ9WV03 339 aaKnown RBP19.3■□□□□ 0.68
Pcdha11-201ENSMUST00000115658 Abcc9P70170 1546 aa19.29■□□□□ 0.68
Pcdha11-201ENSMUST00000115658 Calr4Q3TQS0 420 aa19.28■□□□□ 0.68
Pcdha11-201ENSMUST00000115658 Hsp90aa1P07901 733 aaKnown RBP19.24■□□□□ 0.67
Pcdha11-201ENSMUST00000115658 Ppp4r2Q0VGB7 417 aa19.21■□□□□ 0.67
Pcdha11-201ENSMUST00000115658 Ap3b1Q9Z1T1 1105 aa19.16■□□□□ 0.66
Pcdha11-201ENSMUST00000115658 Wdr43Q6ZQL4 677 aaKnown RBP19.11■□□□□ 0.65
Pcdha11-201ENSMUST00000115658 Ythdc1E9Q5K9 736 aaKnown RBP19.04■□□□□ 0.64
Pcdha11-201ENSMUST00000115658 Cep164Q5DU05 1446 aa19■□□□□ 0.63
Pcdha11-201ENSMUST00000115658 Ccdc27Q3V036 639 aa18.99■□□□□ 0.63
Pcdha11-201ENSMUST00000115658 Zcchc6Q5BLK4 1491 aaKnown RBP18.96■□□□□ 0.63
Pcdha11-201ENSMUST00000115658 Aebp2Q9Z248 504 aaKnown RBP18.91■□□□□ 0.62
Pcdha11-201ENSMUST00000115658 Plekhg3Q4VAC9 1341 aa18.9■□□□□ 0.62
Pcdha11-201ENSMUST00000115658 Irx3P81067 507 aa18.89■□□□□ 0.62
Pcdha11-201ENSMUST00000115658 Eid3Q3V124 375 aa18.85■□□□□ 0.61
Pcdha11-201ENSMUST00000115658 Hnrnpul2Q00PI9 745 aaKnown RBP18.82■□□□□ 0.6
Pcdha11-201ENSMUST00000115658 ArxO35085 564 aa18.81■□□□□ 0.6
Pcdha11-201ENSMUST00000115658 SafbD3YXK2 937 aaKnown RBP18.8■□□□□ 0.6
Pcdha11-201ENSMUST00000115658 Il27Q8K3I6 234 aa18.77■□□□□ 0.6
Pcdha11-201ENSMUST00000115658 Upf2A2AT37 1269 aaKnown RBP18.68■□□□□ 0.58
Pcdha11-201ENSMUST00000115658 CanxP35564 591 aaKnown RBP18.66■□□□□ 0.58
Pcdha11-201ENSMUST00000115658 Abcc8B2RUS7 1588 aa18.64■□□□□ 0.58
Pcdha11-201ENSMUST00000115658 PrkcshO08795 521 aa18.64■□□□□ 0.57
Pcdha11-201ENSMUST00000115658 Lmod3E9QA62 571 aa18.62■□□□□ 0.57
Pcdha11-201ENSMUST00000115658 Trim44Q9QXA7 346 aa18.61■□□□□ 0.57
Pcdha11-201ENSMUST00000115658 Os9Q8K2C7 672 aa18.61■□□□□ 0.57
Pcdha11-201ENSMUST00000115658 Mrs2Q5NCE8 434 aa18.6■□□□□ 0.57
Pcdha11-201ENSMUST00000115658 Clip1Q922J3 1391 aa18.57■□□□□ 0.56
Pcdha11-201ENSMUST00000115658 Chic1Q8CBW7 227 aa18.57■□□□□ 0.56
Pcdha11-201ENSMUST00000115658 Lmod2Q3UHZ5 550 aa18.54■□□□□ 0.56
Pcdha11-201ENSMUST00000115658 Gtf3c3Q3TMP1 882 aa18.53■□□□□ 0.56
Pcdha11-201ENSMUST00000115658 Pknox2Q8BG99 474 aa18.53■□□□□ 0.56
Pcdha11-201ENSMUST00000115658 CatipB9EKE5 520 aa18.53■□□□□ 0.56
Pcdha11-201ENSMUST00000115658 Ccer2J3QPU5 274 aa18.51■□□□□ 0.55
Pcdha11-201ENSMUST00000115658 Hdac5Q9Z2V6 1113 aa18.5■□□□□ 0.55
Pcdha11-201ENSMUST00000115658 AU015836B2RUM3 263 aa18.47■□□□□ 0.55
Pcdha11-201ENSMUST00000115658 DekQ7TNV0 380 aaKnown RBP18.46■□□□□ 0.55
Pcdha11-201ENSMUST00000115658 Nlrp6Q91WS2 869 aa18.45■□□□□ 0.54
Pcdha11-201ENSMUST00000115658 Hsp90ab1P11499 724 aaKnown RBP18.45■□□□□ 0.54
Pcdha11-201ENSMUST00000115658 Supt16hQ920B9 1047 aa18.45■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms