RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Ube2uB1AUC4 352 aa20.78■□□□□ 0.92
Syn1-202ENSMUST00000115345 ClspnQ80YR7 1315 aa20.74■□□□□ 0.91
Syn1-202ENSMUST00000115345 Nolc1E9Q5C9 702 aaKnown RBP20.7■□□□□ 0.9
Syn1-202ENSMUST00000115345 Rtn4Q99P72 1162 aaKnown RBP20.68■□□□□ 0.9
Syn1-202ENSMUST00000115345 Kcnn1Q9EQR3 537 aa20.68■□□□□ 0.9
Syn1-202ENSMUST00000115345 Rsf1E9PWW9 1441 aaKnown RBP20.68■□□□□ 0.9
Syn1-202ENSMUST00000115345 Ccdc136Q3TVA9 1136 aa20.68■□□□□ 0.9
Syn1-202ENSMUST00000115345 Ccdc27Q3V036 639 aa20.66■□□□□ 0.9
Syn1-202ENSMUST00000115345 Kif21aQ9QXL2 1672 aa20.66■□□□□ 0.9
Syn1-202ENSMUST00000115345 Cux2P70298 1426 aa20.64■□□□□ 0.9
Syn1-202ENSMUST00000115345 NgefQ8CHT1 710 aa20.61■□□□□ 0.89
Syn1-202ENSMUST00000115345 Taok2Q6ZQ29 1240 aa20.6■□□□□ 0.89
Syn1-202ENSMUST00000115345 Rbm10Q99KG3 930 aaKnown RBP20.59■□□□□ 0.89
Syn1-202ENSMUST00000115345 Kif15Q6P9L6 1387 aa20.56■□□□□ 0.88
Syn1-202ENSMUST00000115345 Eif4g3Q80XI3 1579 aaKnown RBP20.55■□□□□ 0.88
Syn1-202ENSMUST00000115345 Supt16hQ920B9 1047 aa20.54■□□□□ 0.88
Syn1-202ENSMUST00000115345 Lamc3Q9R0B6 1581 aa20.52■□□□□ 0.88
Syn1-202ENSMUST00000115345 ArxO35085 564 aa20.5■□□□□ 0.87
Syn1-202ENSMUST00000115345 Rsph4aQ8BYM7 716 aa20.48■□□□□ 0.87
Syn1-202ENSMUST00000115345 Shroom2A2ALU4 1481 aa20.47■□□□□ 0.87
Syn1-202ENSMUST00000115345 Ppargc1bQ8VHJ7 1014 aa20.47■□□□□ 0.87
Syn1-202ENSMUST00000115345 NeflP08551 543 aa20.47■□□□□ 0.87
Syn1-202ENSMUST00000115345 Hsp90aa1P07901 733 aaKnown RBP20.44■□□□□ 0.86
Syn1-202ENSMUST00000115345 Mier1Q5UAK0 511 aa20.44■□□□□ 0.86
Syn1-202ENSMUST00000115345 Dnttip2Q8R2M2 758 aaKnown RBP20.43■□□□□ 0.86
Syn1-202ENSMUST00000115345 Vgll3P85442 326 aa20.43■□□□□ 0.86
Syn1-202ENSMUST00000115345 Esf1Q3V1V3 845 aaKnown RBP20.41■□□□□ 0.86
Syn1-202ENSMUST00000115345 DmtnQ9WV69 405 aa20.41■□□□□ 0.86
Syn1-202ENSMUST00000115345 Anp32bQ9EST5 272 aaKnown RBP20.4■□□□□ 0.86
Syn1-202ENSMUST00000115345 Pdcl3Q8BVF2 240 aa20.36■□□□□ 0.85
Syn1-202ENSMUST00000115345 Chrna2Q91X60 512 aa20.31■□□□□ 0.84
Syn1-202ENSMUST00000115345 Cep164Q5DU05 1446 aa20.31■□□□□ 0.84
Syn1-202ENSMUST00000115345 Npm1Q61937 292 aaKnown RBP20.29■□□□□ 0.84
Syn1-202ENSMUST00000115345 Urb2E9Q7L1 1524 aaKnown RBP20.28■□□□□ 0.84
Syn1-202ENSMUST00000115345 Tshz2Q68FE9 1030 aa20.26■□□□□ 0.83
Syn1-202ENSMUST00000115345 Armcx1Q9CX83 456 aa20.24■□□□□ 0.83
Syn1-202ENSMUST00000115345 Myt1lP97500 1187 aa20.24■□□□□ 0.83
Syn1-202ENSMUST00000115345 TnnQ80Z71 1560 aa20.23■□□□□ 0.83
Syn1-202ENSMUST00000115345 Col17a1Q07563 1470 aa20.23■□□□□ 0.83
Syn1-202ENSMUST00000115345 Gtf2a1Q99PM3 378 aa20.22■□□□□ 0.83
Syn1-202ENSMUST00000115345 4933416C03RikQ3V063 378 aa20.21■□□□□ 0.83
Syn1-202ENSMUST00000115345 Plb1Q3TTY0 1478 aa20.2■□□□□ 0.82
Syn1-202ENSMUST00000115345 Znf692Q3U381 531 aa20.19■□□□□ 0.82
Syn1-202ENSMUST00000115345 Dhx29Q6PGC1 1365 aaKnown RBP20.19■□□□□ 0.82
Syn1-202ENSMUST00000115345 Ap3b1Q9Z1T1 1105 aa20.16■□□□□ 0.82
Syn1-202ENSMUST00000115345 Crocc2F6XLV1 1638 aa20.15■□□□□ 0.82
Syn1-202ENSMUST00000115345 Ccdc18Q640L5 1455 aa20.14■□□□□ 0.81
Syn1-202ENSMUST00000115345 Top2bQ64511 1612 aa20.14■□□□□ 0.81
Syn1-202ENSMUST00000115345 Ube2q2Q8K2Z8 378 aa20.14■□□□□ 0.81
Syn1-202ENSMUST00000115345 Calr4Q3TQS0 420 aa20.11■□□□□ 0.81
Syn1-202ENSMUST00000115345 Camsap1A2AHC3 1581 aa20.11■□□□□ 0.81
Syn1-202ENSMUST00000115345 Rusc2Q80U22 1514 aa20.1■□□□□ 0.81
Syn1-202ENSMUST00000115345 LrpprcQ6PB66 1392 aaKnown RBP20.08■□□□□ 0.81
Syn1-202ENSMUST00000115345 Rrp9Q91WM3 475 aaKnown RBP20.08■□□□□ 0.81
Syn1-202ENSMUST00000115345 Zfp91Q62511 572 aa20.07■□□□□ 0.8
Syn1-202ENSMUST00000115345 Ift140E9PY46 1464 aa20.04■□□□□ 0.8
Syn1-202ENSMUST00000115345 Ythdc1E9Q5K9 736 aaKnown RBP20.04■□□□□ 0.8
Syn1-202ENSMUST00000115345 Zbtb4Q5F293 982 aa20.04■□□□□ 0.8
Syn1-202ENSMUST00000115345 Pabpn1Q8CCS6 302 aaKnown RBP20.04■□□□□ 0.8
Syn1-202ENSMUST00000115345 Pak3Q61036 559 aa20.03■□□□□ 0.8
Syn1-202ENSMUST00000115345 DekQ7TNV0 380 aaKnown RBP20.01■□□□□ 0.79
Syn1-202ENSMUST00000115345 Fbxo3Q9DC63 480 aa19.99■□□□□ 0.79
Syn1-202ENSMUST00000115345 Zcchc11B2RX14 1644 aaKnown RBP19.99■□□□□ 0.79
Syn1-202ENSMUST00000115345 PogzQ8BZH4 1409 aaKnown RBP19.98■□□□□ 0.79
Syn1-202ENSMUST00000115345 Ccer2J3QPU5 274 aa19.97■□□□□ 0.79
Syn1-202ENSMUST00000115345 Golga3P55937 1487 aa19.97■□□□□ 0.79
Syn1-202ENSMUST00000115345 Ppp4r2Q0VGB7 417 aa19.96■□□□□ 0.79
Syn1-202ENSMUST00000115345 Znf710Q3U288 666 aa19.96■□□□□ 0.79
Syn1-202ENSMUST00000115345 DaxxO35613 739 aa19.93■□□□□ 0.78
Syn1-202ENSMUST00000115345 Wdr43Q6ZQL4 677 aaKnown RBP19.9■□□□□ 0.78
Syn1-202ENSMUST00000115345 Samd1D3YXK1 519 aa19.9■□□□□ 0.78
Syn1-202ENSMUST00000115345 Fam43aQ8BUP8 424 aa19.88■□□□□ 0.77
Syn1-202ENSMUST00000115345 Stard8Q8K031 1019 aa19.88■□□□□ 0.77
Syn1-202ENSMUST00000115345 Egfem1Q8C088 590 aa19.88■□□□□ 0.77
Syn1-202ENSMUST00000115345 Ipo9Q91YE6 1041 aa19.86■□□□□ 0.77
Syn1-202ENSMUST00000115345 Duox2A2AQ99 1517 aa19.86■□□□□ 0.77
Syn1-202ENSMUST00000115345 Znf326O88291 580 aa19.84■□□□□ 0.77
Syn1-202ENSMUST00000115345 Fmn1Q05860 1466 aa19.84■□□□□ 0.77
Syn1-202ENSMUST00000115345 Pbrm1Q8BSQ9 1634 aaKnown RBP19.83■□□□□ 0.77
Syn1-202ENSMUST00000115345 Disp1Q3TDN0 1521 aa19.83■□□□□ 0.76
Syn1-202ENSMUST00000115345 Ncbp3Q8BZR9 615 aaKnown RBP19.82■□□□□ 0.76
Syn1-202ENSMUST00000115345 Liat1Q810M6 228 aa19.81■□□□□ 0.76
Syn1-202ENSMUST00000115345 AU015836B2RUM3 263 aa19.8■□□□□ 0.76
Syn1-202ENSMUST00000115345 Nup160Q9Z0W3 1402 aaKnown RBP19.79■□□□□ 0.76
Syn1-202ENSMUST00000115345 Stra8P70278 393 aa19.78■□□□□ 0.76
Syn1-202ENSMUST00000115345 Chmp4bQ9D8B3 224 aaKnown RBP19.78■□□□□ 0.76
Syn1-202ENSMUST00000115345 Iqcf3Q9D498 203 aa19.78■□□□□ 0.76
Syn1-202ENSMUST00000115345 ChgaP26339 463 aaKnown RBP19.77■□□□□ 0.76
Syn1-202ENSMUST00000115345 Grin2bQ01097 1482 aa19.77■□□□□ 0.76
Syn1-202ENSMUST00000115345 Setd1bQ8CFT2 1985 aa19.76■□□□□ 0.75
Syn1-202ENSMUST00000115345 Samd9lQ69Z37 1561 aa19.76■□□□□ 0.75
Syn1-202ENSMUST00000115345 Sox12Q04890 314 aa19.74■□□□□ 0.75
Syn1-202ENSMUST00000115345 Cc2d2bA0A286YDU8 1405 aa19.74■□□□□ 0.75
Syn1-202ENSMUST00000115345 IbspQ61711 324 aa19.72■□□□□ 0.75
Syn1-202ENSMUST00000115345 4933402E13RikQ9D4D2 429 aa19.72■□□□□ 0.75
Syn1-202ENSMUST00000115345 Q8BT18 775 aa19.69■□□□□ 0.74
Syn1-202ENSMUST00000115345 TonslQ6NZL6 1363 aa19.69■□□□□ 0.74
Syn1-202ENSMUST00000115345 AcrbpQ3V140 540 aa19.68■□□□□ 0.74
Syn1-202ENSMUST00000115345 Washc2Q6PGL7 1334 aa19.68■□□□□ 0.74
Syn1-202ENSMUST00000115345 Adgrl3Q80TS3 1537 aa19.66■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 80.6 ms