RNA–Protein interactions for RNA: ENSMUST00000111194.7

Cd44-207, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cd44, Length 5,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-207ENSMUST00000111194 CftrP26361 1476 aa9.36□□□□□ -0.91
Cd44-207ENSMUST00000111194 Hnrnpul2Q00PI9 745 aaKnown RBP9.35□□□□□ -0.91
Cd44-207ENSMUST00000111194 Synj1Q8CHC4 1574 aa9.34□□□□□ -0.91
Cd44-207ENSMUST00000111194 SafbD3YXK2 937 aaKnown RBP9.31□□□□□ -0.92
Cd44-207ENSMUST00000111194 Ccdc18Q640L5 1455 aa9.31□□□□□ -0.92
Cd44-207ENSMUST00000111194 DaxxO35613 739 aa9.31□□□□□ -0.92
Cd44-207ENSMUST00000111194 Rapgef2Q8CHG7 1496 aa9.28□□□□□ -0.92
Cd44-207ENSMUST00000111194 Mia2Q91ZV0 1396 aa9.28□□□□□ -0.92
Cd44-207ENSMUST00000111194 Gm13697A2AK42 830 aa9.27□□□□□ -0.92
Cd44-207ENSMUST00000111194 Hspa5P20029 655 aaKnown RBP9.27□□□□□ -0.93
Cd44-207ENSMUST00000111194 Fkbp15Q6P9Q6 1216 aaKnown RBP9.27□□□□□ -0.93
Cd44-207ENSMUST00000111194 Erich6D3Z6S9 713 aa9.26□□□□□ -0.93
Cd44-207ENSMUST00000111194 Nlrp6Q91WS2 869 aa9.26□□□□□ -0.93
Cd44-207ENSMUST00000111194 Upf2A2AT37 1269 aaKnown RBP9.26□□□□□ -0.93
Cd44-207ENSMUST00000111194 Ercc6F8VPZ5 1481 aa9.25□□□□□ -0.93
Cd44-207ENSMUST00000111194 P3h3Q8CG70 732 aa9.24□□□□□ -0.93
Cd44-207ENSMUST00000111194 Rgl3Q3UYI5 709 aa9.23□□□□□ -0.93
Cd44-207ENSMUST00000111194 Rad21Q61550 635 aaKnown RBP9.23□□□□□ -0.93
Cd44-207ENSMUST00000111194 Hdac5Q9Z2V6 1113 aa9.22□□□□□ -0.93
Cd44-207ENSMUST00000111194 Baz1bQ9Z277 1479 aa9.22□□□□□ -0.93
Cd44-207ENSMUST00000111194 Ofd1Q80Z25 1017 aa9.21□□□□□ -0.93
Cd44-207ENSMUST00000111194 Prdm10Q3UTQ7 1184 aa9.2□□□□□ -0.94
Cd44-207ENSMUST00000111194 Cttnbp2B9EJA2 1648 aa9.19□□□□□ -0.94
Cd44-207ENSMUST00000111194 Ifnlr1Q8CGK5 535 aa9.19□□□□□ -0.94
Cd44-207ENSMUST00000111194 Pds5bQ4VA53 1446 aaKnown RBP9.18□□□□□ -0.94
Cd44-207ENSMUST00000111194 Polr3glQ8R0C0 218 aa9.18□□□□□ -0.94
Cd44-207ENSMUST00000111194 Clstn2Q9ER65 966 aa9.18□□□□□ -0.94
Cd44-207ENSMUST00000111194 Cwc22Q8C5N3 908 aaKnown RBP9.17□□□□□ -0.94
Cd44-207ENSMUST00000111194 Arhgap35Q91YM2 1499 aa9.17□□□□□ -0.94
Cd44-207ENSMUST00000111194 Fyco1Q8VDC1 1437 aa9.16□□□□□ -0.94
Cd44-207ENSMUST00000111194 Sin3aQ60520 1274 aaKnown RBP9.16□□□□□ -0.94
Cd44-207ENSMUST00000111194 Smarca4Q3TKT4 1613 aaKnown RBP9.16□□□□□ -0.94
Cd44-207ENSMUST00000111194 ArxO35085 564 aa9.15□□□□□ -0.94
Cd44-207ENSMUST00000111194 Card11Q8CIS0 1159 aa9.15□□□□□ -0.94
Cd44-207ENSMUST00000111194 CntlnA2AM05 1397 aa9.15□□□□□ -0.95
Cd44-207ENSMUST00000111194 Aebp1Q640N1 1128 aa9.14□□□□□ -0.95
Cd44-207ENSMUST00000111194 Wwc2Q6NXJ0 1187 aa9.14□□□□□ -0.95
Cd44-207ENSMUST00000111194 Grwd1Q810D6 446 aaKnown RBP9.14□□□□□ -0.95
Cd44-207ENSMUST00000111194 Hsp90aa1P07901 733 aaKnown RBP9.14□□□□□ -0.95
Cd44-207ENSMUST00000111194 Mtus2Q3UHD3 1353 aa9.13□□□□□ -0.95
Cd44-207ENSMUST00000111194 Ccdc9Q8VC31 543 aaKnown RBP9.12□□□□□ -0.95
Cd44-207ENSMUST00000111194 Pkd2O35245 966 aa9.1□□□□□ -0.95
Cd44-207ENSMUST00000111194 Kif27Q7M6Z4 1394 aa9.1□□□□□ -0.95
Cd44-207ENSMUST00000111194 Ccdc27Q3V036 639 aa9.1□□□□□ -0.95
Cd44-207ENSMUST00000111194 Atp1b4Q99ME6 356 aa9.1□□□□□ -0.95
Cd44-207ENSMUST00000111194 Cc2d2aQ8CFW7 1633 aa9.1□□□□□ -0.95
Cd44-207ENSMUST00000111194 Arhgap27A2AB59 869 aa9.09□□□□□ -0.95
Cd44-207ENSMUST00000111194 Mphosph9A6H5Y1 991 aa9.09□□□□□ -0.95
Cd44-207ENSMUST00000111194 Exoc6Q8R313 802 aa9.09□□□□□ -0.95
Cd44-207ENSMUST00000111194 Bcl11aQ9QYE3 773 aa9.09□□□□□ -0.95
Cd44-207ENSMUST00000111194 Top2aQ01320 1528 aaKnown RBP9.09□□□□□ -0.95
Cd44-207ENSMUST00000111194 CanxP35564 591 aaKnown RBP9.09□□□□□ -0.95
Cd44-207ENSMUST00000111194 Atad2bE9Q166 1460 aaKnown RBP9.08□□□□□ -0.96
Cd44-207ENSMUST00000111194 Carmil1Q6EDY6 1374 aa9.07□□□□□ -0.96
Cd44-207ENSMUST00000111194 Supt16hQ920B9 1047 aa9.07□□□□□ -0.96
Cd44-207ENSMUST00000111194 4930567H17RikQ3V0K5 233 aa9.07□□□□□ -0.96
Cd44-207ENSMUST00000111194 Slc4a3P16283 1227 aa9.06□□□□□ -0.96
Cd44-207ENSMUST00000111194 Gm13695A2AK44 830 aa9.06□□□□□ -0.96
Cd44-207ENSMUST00000111194 Cabp1Q9JLK7 227 aa9.05□□□□□ -0.96
Cd44-207ENSMUST00000111194 Rundc1Q0VDN7 615 aa9.05□□□□□ -0.96
Cd44-207ENSMUST00000111194 Smg6P61406 1418 aaKnown RBP9.04□□□□□ -0.96
Cd44-207ENSMUST00000111194 Nolc1E9Q5C9 702 aaKnown RBP9.04□□□□□ -0.96
Cd44-207ENSMUST00000111194 Ncapd3Q6ZQK0 1506 aa9.04□□□□□ -0.96
Cd44-207ENSMUST00000111194 Cux2P70298 1426 aa9.03□□□□□ -0.96
Cd44-207ENSMUST00000111194 Trim30dE9PWL0 497 aa9.03□□□□□ -0.96
Cd44-207ENSMUST00000111194 Tcerg1Q8CGF7 1100 aaKnown RBP9.03□□□□□ -0.96
Cd44-207ENSMUST00000111194 Iqgap2Q3UQ44 1575 aa9.03□□□□□ -0.96
Cd44-207ENSMUST00000111194 Rangap1P46061 589 aaKnown RBP9.03□□□□□ -0.96
Cd44-207ENSMUST00000111194 Mroh3A0A1D5RM54 893 aa9.02□□□□□ -0.97
Cd44-207ENSMUST00000111194 Kdm2aP59997 1161 aa9.02□□□□□ -0.97
Cd44-207ENSMUST00000111194 Hsp90ab1P11499 724 aaKnown RBP9.02□□□□□ -0.97
Cd44-207ENSMUST00000111194 Rrp7aQ9D1C9 280 aaKnown RBP9.02□□□□□ -0.97
Cd44-207ENSMUST00000111194 Apbb1Q9QXJ1 710 aa9.02□□□□□ -0.97
Cd44-207ENSMUST00000111194 Ccnb3Q810T2 1396 aa9.01□□□□□ -0.97
Cd44-207ENSMUST00000111194 Rpap1Q80TE0 1409 aa9.01□□□□□ -0.97
Cd44-207ENSMUST00000111194 Map4P27546 1125 aaKnown RBP8.99□□□□□ -0.97
Cd44-207ENSMUST00000111194 Trak1Q6PD31 939 aa8.99□□□□□ -0.97
Cd44-207ENSMUST00000111194 Trim26Q99PN3 545 aa8.99□□□□□ -0.97
Cd44-207ENSMUST00000111194 UacaQ8CGB3 1411 aa8.99□□□□□ -0.97
Cd44-207ENSMUST00000111194 Ankrd36D3Z4K0 1415 aa8.99□□□□□ -0.97
Cd44-207ENSMUST00000111194 Top2bQ64511 1612 aa8.98□□□□□ -0.97
Cd44-207ENSMUST00000111194 Neurod2Q62414 383 aa8.98□□□□□ -0.97
Cd44-207ENSMUST00000111194 Znf710Q3U288 666 aa8.98□□□□□ -0.97
Cd44-207ENSMUST00000111194 Dbr1Q923B1 550 aa8.98□□□□□ -0.97
Cd44-207ENSMUST00000111194 Shroom4Q1W617 1475 aa8.98□□□□□ -0.97
Cd44-207ENSMUST00000111194 B4galnt3Q6L8S8 986 aa8.98□□□□□ -0.97
Cd44-207ENSMUST00000111194 Fhad1A6PWD2 1420 aa8.98□□□□□ -0.97
Cd44-207ENSMUST00000111194 Arap1Q4LDD4 1452 aa8.97□□□□□ -0.97
Cd44-207ENSMUST00000111194 Ppm1gQ61074 542 aa8.97□□□□□ -0.97
Cd44-207ENSMUST00000111194 Zscan21Q07231 555 aa8.96□□□□□ -0.97
Cd44-207ENSMUST00000111194 Mbd3Q9Z2D8 285 aaKnown RBP8.96□□□□□ -0.97
Cd44-207ENSMUST00000111194 Usp47Q8BY87 1376 aa8.96□□□□□ -0.97
Cd44-207ENSMUST00000111194 Gm20521D3Z5F7 333 aa8.96□□□□□ -0.98
Cd44-207ENSMUST00000111194 Ipo9Q91YE6 1041 aa8.96□□□□□ -0.98
Cd44-207ENSMUST00000111194 Naip1Q9QWK5 1403 aa8.96□□□□□ -0.98
Cd44-207ENSMUST00000111194 LrpprcQ6PB66 1392 aaKnown RBP8.96□□□□□ -0.98
Cd44-207ENSMUST00000111194 Srpk2O54781 681 aaKnown RBP8.96□□□□□ -0.98
Cd44-207ENSMUST00000111194 Plekhh2Q8C115 1491 aa8.96□□□□□ -0.98
Cd44-207ENSMUST00000111194 Phldb1Q6PDH0 1371 aaKnown RBP8.95□□□□□ -0.98
Cd44-207ENSMUST00000111194 Mak16Q8BGS0 296 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 133.2 ms