RNA–Protein interactions for RNA: ENSMUST00000111194.7

Cd44-207, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cd44, Length 5,045 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-207ENSMUST00000111194 Rhox8Q6VSS7 320 aa12.19□□□□□ -0.46
Cd44-207ENSMUST00000111194 NischQ80TM9 1593 aa11.44□□□□□ -0.58
Cd44-207ENSMUST00000111194 Rpgrip1Q9EPQ2 1331 aa11.41□□□□□ -0.58
Cd44-207ENSMUST00000111194 Ehmt2Q9Z148 1263 aaKnown RBP11.14□□□□□ -0.63
Cd44-207ENSMUST00000111194 Ccdc136Q3TVA9 1136 aa11□□□□□ -0.65
Cd44-207ENSMUST00000111194 Ccdc180J3QNE4 1664 aa10.85□□□□□ -0.67
Cd44-207ENSMUST00000111194 Abcc9P70170 1546 aa10.83□□□□□ -0.68
Cd44-207ENSMUST00000111194 Acin1Q9JIX8 1338 aaKnown RBP10.81□□□□□ -0.68
Cd44-207ENSMUST00000111194 Rtl1Q7M732 1744 aa10.8□□□□□ -0.68
Cd44-207ENSMUST00000111194 Trim41Q5NCC3 630 aa10.77□□□□□ -0.69
Cd44-207ENSMUST00000111194 Cngb1E1AZ71 1325 aa10.74□□□□□ -0.69
Cd44-207ENSMUST00000111194 Gab3Q8BSM5 595 aa10.67□□□□□ -0.7
Cd44-207ENSMUST00000111194 Zeb1Q64318 1117 aa10.65□□□□□ -0.71
Cd44-207ENSMUST00000111194 Las1lA2BE28 776 aaKnown RBP10.64□□□□□ -0.71
Cd44-207ENSMUST00000111194 HrcG5E8J6 738 aa10.64□□□□□ -0.71
Cd44-207ENSMUST00000111194 Esf1Q3V1V3 845 aaKnown RBP10.63□□□□□ -0.71
Cd44-207ENSMUST00000111194 Wdr66E9Q743 1299 aa10.59□□□□□ -0.71
Cd44-207ENSMUST00000111194 Abcc8B2RUS7 1588 aa10.56□□□□□ -0.72
Cd44-207ENSMUST00000111194 Pcgf6Q99NA9 353 aa10.46□□□□□ -0.73
Cd44-207ENSMUST00000111194 NefmP08553 848 aa10.45□□□□□ -0.74
Cd44-207ENSMUST00000111194 Npm2Q80W85 207 aa10.39□□□□□ -0.75
Cd44-207ENSMUST00000111194 Myt1lP97500 1187 aa10.38□□□□□ -0.75
Cd44-207ENSMUST00000111194 Gm35339A0A140LHH9 1649 aa10.36□□□□□ -0.75
Cd44-207ENSMUST00000111194 UbtfP25976 765 aaKnown RBP10.33□□□□□ -0.76
Cd44-207ENSMUST00000111194 Zcchc6Q5BLK4 1491 aaKnown RBP10.32□□□□□ -0.76
Cd44-207ENSMUST00000111194 Supt5hO55201 1082 aaKnown RBP10.26□□□□□ -0.77
Cd44-207ENSMUST00000111194 Ube2uB1AUC4 352 aa10.21□□□□□ -0.77
Cd44-207ENSMUST00000111194 CenpbP27790 599 aa10.2□□□□□ -0.78
Cd44-207ENSMUST00000111194 Dcaf1Q80TR8 1506 aa10.18□□□□□ -0.78
Cd44-207ENSMUST00000111194 Cdk11bP24788 784 aaKnown RBP10.15□□□□□ -0.78
Cd44-207ENSMUST00000111194 Mier1Q5UAK0 511 aa10.12□□□□□ -0.79
Cd44-207ENSMUST00000111194 Pelp1Q9DBD5 1123 aaKnown RBP10.12□□□□□ -0.79
Cd44-207ENSMUST00000111194 Nop58Q6DFW4 536 aaKnown RBP10.07□□□□□ -0.8
Cd44-207ENSMUST00000111194 Rb1cc1Q9ESK9 1588 aa10.06□□□□□ -0.8
Cd44-207ENSMUST00000111194 Cep164Q5DU05 1446 aa10.05□□□□□ -0.8
Cd44-207ENSMUST00000111194 Stra8P70278 393 aa10.04□□□□□ -0.8
Cd44-207ENSMUST00000111194 Ppargc1bQ8VHJ7 1014 aa10.02□□□□□ -0.81
Cd44-207ENSMUST00000111194 Il27Q8K3I6 234 aa10□□□□□ -0.81
Cd44-207ENSMUST00000111194 TonslQ6NZL6 1363 aa9.99□□□□□ -0.81
Cd44-207ENSMUST00000111194 Chic1Q8CBW7 227 aa9.97□□□□□ -0.81
Cd44-207ENSMUST00000111194 Neurod1Q60867 357 aa9.96□□□□□ -0.81
Cd44-207ENSMUST00000111194 Ap3b1Q9Z1T1 1105 aa9.95□□□□□ -0.82
Cd44-207ENSMUST00000111194 Slc24a1Q91WD8 1130 aa9.94□□□□□ -0.82
Cd44-207ENSMUST00000111194 Brd4Q9ESU6 1400 aaKnown RBP9.93□□□□□ -0.82
Cd44-207ENSMUST00000111194 Tnnt3Q9QZ47 272 aa9.92□□□□□ -0.82
Cd44-207ENSMUST00000111194 Myt1Q8CFC2 1127 aa9.91□□□□□ -0.82
Cd44-207ENSMUST00000111194 ClspnQ80YR7 1315 aa9.91□□□□□ -0.82
Cd44-207ENSMUST00000111194 Sall2Q9QX96 1004 aa9.91□□□□□ -0.82
Cd44-207ENSMUST00000111194 Fam50aQ9WV03 339 aaKnown RBP9.91□□□□□ -0.82
Cd44-207ENSMUST00000111194 NclP09405 707 aaKnown RBP9.89□□□□□ -0.83
Cd44-207ENSMUST00000111194 Baz1aO88379 1555 aa9.87□□□□□ -0.83
Cd44-207ENSMUST00000111194 Plekhg3Q4VAC9 1341 aa9.86□□□□□ -0.83
Cd44-207ENSMUST00000111194 Anks4bQ8K3X6 423 aa9.82□□□□□ -0.84
Cd44-207ENSMUST00000111194 NacadQ5SWP3 1504 aa9.81□□□□□ -0.84
Cd44-207ENSMUST00000111194 Csrnp3P59055 597 aa9.77□□□□□ -0.85
Cd44-207ENSMUST00000111194 Clip1Q922J3 1391 aa9.76□□□□□ -0.85
Cd44-207ENSMUST00000111194 NrdcQ8BHG1 1161 aa9.75□□□□□ -0.85
Cd44-207ENSMUST00000111194 Eif5bQ05D44 1216 aaKnown RBP9.72□□□□□ -0.85
Cd44-207ENSMUST00000111194 Eid3Q3V124 375 aa9.71□□□□□ -0.85
Cd44-207ENSMUST00000111194 Golga3P55937 1487 aa9.71□□□□□ -0.85
Cd44-207ENSMUST00000111194 Kdm5dQ62240 1548 aa9.71□□□□□ -0.86
Cd44-207ENSMUST00000111194 Lmod2Q3UHZ5 550 aa9.71□□□□□ -0.86
Cd44-207ENSMUST00000111194 Rsf1E9PWW9 1441 aaKnown RBP9.7□□□□□ -0.86
Cd44-207ENSMUST00000111194 Aplp2Q06335 707 aa9.68□□□□□ -0.86
Cd44-207ENSMUST00000111194 Gm38655A0A286YDK6 273 aa9.67□□□□□ -0.86
Cd44-207ENSMUST00000111194 Mapk8ip2Q9ERE9 830 aa9.66□□□□□ -0.86
Cd44-207ENSMUST00000111194 Aebp2Q9Z248 504 aaKnown RBP9.64□□□□□ -0.87
Cd44-207ENSMUST00000111194 Anp32aO35381 247 aa9.63□□□□□ -0.87
Cd44-207ENSMUST00000111194 Amer1Q7TS75 1132 aa9.63□□□□□ -0.87
Cd44-207ENSMUST00000111194 Anp32bQ9EST5 272 aaKnown RBP9.62□□□□□ -0.87
Cd44-207ENSMUST00000111194 Npm1Q61937 292 aaKnown RBP9.62□□□□□ -0.87
Cd44-207ENSMUST00000111194 Rtl5Q5DTT4 599 aa9.61□□□□□ -0.87
Cd44-207ENSMUST00000111194 Ttbk1Q6PCN3 1308 aa9.61□□□□□ -0.87
Cd44-207ENSMUST00000111194 1700123L14RikQ3V2K7 440 aa9.59□□□□□ -0.87
Cd44-207ENSMUST00000111194 NeflP08551 543 aa9.58□□□□□ -0.88
Cd44-207ENSMUST00000111194 Ccdc88bQ4QRL3 1481 aa9.56□□□□□ -0.88
Cd44-207ENSMUST00000111194 Ccer2J3QPU5 274 aa9.54□□□□□ -0.88
Cd44-207ENSMUST00000111194 BlmO88700 1416 aa9.51□□□□□ -0.89
Cd44-207ENSMUST00000111194 Setd5Q5XJV7 1441 aa9.51□□□□□ -0.89
Cd44-207ENSMUST00000111194 4933416C03RikQ3V063 378 aa9.5□□□□□ -0.89
Cd44-207ENSMUST00000111194 Crybg2B7ZCC2 1516 aa9.48□□□□□ -0.89
Cd44-207ENSMUST00000111194 Calr4Q3TQS0 420 aa9.48□□□□□ -0.89
Cd44-207ENSMUST00000111194 Smarca2Q6DIC0 1577 aa9.46□□□□□ -0.89
Cd44-207ENSMUST00000111194 DiexfQ8BTT6 772 aaKnown RBP9.46□□□□□ -0.9
Cd44-207ENSMUST00000111194 Os9Q8K2C7 672 aa9.45□□□□□ -0.9
Cd44-207ENSMUST00000111194 Eea1Q8BL66 1411 aa9.45□□□□□ -0.9
Cd44-207ENSMUST00000111194 ScribQ80U72 1612 aa9.44□□□□□ -0.9
Cd44-207ENSMUST00000111194 Zbtb7cQ8VCZ7 619 aa9.42□□□□□ -0.9
Cd44-207ENSMUST00000111194 Chic2Q9D9G3 165 aa9.42□□□□□ -0.9
Cd44-207ENSMUST00000111194 Cep162Q6ZQ06 1403 aa9.42□□□□□ -0.9
Cd44-207ENSMUST00000111194 Sycp2Q9CUU3 1500 aa9.42□□□□□ -0.9
Cd44-207ENSMUST00000111194 Ppp4r2Q0VGB7 417 aa9.4□□□□□ -0.9
Cd44-207ENSMUST00000111194 Fmn1Q05860 1466 aa9.39□□□□□ -0.91
Cd44-207ENSMUST00000111194 Mrs2Q5NCE8 434 aa9.38□□□□□ -0.91
Cd44-207ENSMUST00000111194 Kif15Q6P9L6 1387 aa9.38□□□□□ -0.91
Cd44-207ENSMUST00000111194 Ubl4bQ9CQ84 188 aa9.38□□□□□ -0.91
Cd44-207ENSMUST00000111194 Cecr2E9Q2Z1 1453 aa9.38□□□□□ -0.91
Cd44-207ENSMUST00000111194 Fam71e1A1L3C1 212 aa9.37□□□□□ -0.91
Cd44-207ENSMUST00000111194 Zbtb4Q5F293 982 aa9.37□□□□□ -0.91
Cd44-207ENSMUST00000111194 Wdr43Q6ZQL4 677 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 66.2 ms