RNA–Protein interactions for RNA: ENSMUST00000109927.1

Syne3-203, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Syne3, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-203ENSMUST00000109927 Pabpn1Q8CCS6 302 aaKnown RBP17.24■□□□□ 0.35
Syne3-203ENSMUST00000109927 Cecr2E9Q2Z1 1453 aa17.24■□□□□ 0.35
Syne3-203ENSMUST00000109927 Arid3cA6PWV5 409 aa17.22■□□□□ 0.35
Syne3-203ENSMUST00000109927 ClspnQ80YR7 1315 aa17.18■□□□□ 0.34
Syne3-203ENSMUST00000109927 Prdm10Q3UTQ7 1184 aa17.18■□□□□ 0.34
Syne3-203ENSMUST00000109927 Nlrp6Q91WS2 869 aa17.17■□□□□ 0.34
Syne3-203ENSMUST00000109927 Eid3Q3V124 375 aa17.16■□□□□ 0.34
Syne3-203ENSMUST00000109927 Rrp7aQ9D1C9 280 aaKnown RBP17.13■□□□□ 0.33
Syne3-203ENSMUST00000109927 Iqgap2Q3UQ44 1575 aa17.12■□□□□ 0.33
Syne3-203ENSMUST00000109927 LrpprcQ6PB66 1392 aaKnown RBP17.11■□□□□ 0.33
Syne3-203ENSMUST00000109927 Kif27Q7M6Z4 1394 aa17.11■□□□□ 0.33
Syne3-203ENSMUST00000109927 Smarca2Q6DIC0 1577 aa17.11■□□□□ 0.33
Syne3-203ENSMUST00000109927 Rpap1Q80TE0 1409 aa17.1■□□□□ 0.33
Syne3-203ENSMUST00000109927 Mtus2Q3UHD3 1353 aa17.09■□□□□ 0.33
Syne3-203ENSMUST00000109927 Dhx29Q6PGC1 1365 aaKnown RBP17.08■□□□□ 0.32
Syne3-203ENSMUST00000109927 Baz1bQ9Z277 1479 aa17.08■□□□□ 0.32
Syne3-203ENSMUST00000109927 MlecQ6ZQI3 291 aaKnown RBP17.06■□□□□ 0.32
Syne3-203ENSMUST00000109927 Lemd3Q9WU40 921 aa17.05■□□□□ 0.32
Syne3-203ENSMUST00000109927 Synj1Q8CHC4 1574 aa17.04■□□□□ 0.32
Syne3-203ENSMUST00000109927 4933416C03RikQ3V063 378 aa17.02■□□□□ 0.32
Syne3-203ENSMUST00000109927 Cttnbp2B9EJA2 1648 aa17.01■□□□□ 0.31
Syne3-203ENSMUST00000109927 DiexfQ8BTT6 772 aaKnown RBP16.99■□□□□ 0.31
Syne3-203ENSMUST00000109927 IqubQ8CDK3 788 aa16.98■□□□□ 0.31
Syne3-203ENSMUST00000109927 Aebp1Q640N1 1128 aa16.98■□□□□ 0.31
Syne3-203ENSMUST00000109927 Ccdc88bQ4QRL3 1481 aa16.94■□□□□ 0.3
Syne3-203ENSMUST00000109927 Mroh3A0A1D5RM54 893 aa16.94■□□□□ 0.3
Syne3-203ENSMUST00000109927 Dhx57Q6P5D3 1388 aaKnown RBP16.93■□□□□ 0.3
Syne3-203ENSMUST00000109927 Srpk2O54781 681 aaKnown RBP16.93■□□□□ 0.3
Syne3-203ENSMUST00000109927 Mapk8ip2Q9ERE9 830 aa16.93■□□□□ 0.3
Syne3-203ENSMUST00000109927 Carmil1Q6EDY6 1374 aa16.92■□□□□ 0.3
Syne3-203ENSMUST00000109927 Rgl3Q3UYI5 709 aa16.91■□□□□ 0.3
Syne3-203ENSMUST00000109927 Rsph4aQ8BYM7 716 aa16.9■□□□□ 0.3
Syne3-203ENSMUST00000109927 Stk24Q99KH8 431 aa16.89■□□□□ 0.29
Syne3-203ENSMUST00000109927 Mrc2Q64449 1479 aa16.89■□□□□ 0.29
Syne3-203ENSMUST00000109927 Cep162Q6ZQ06 1403 aa16.89■□□□□ 0.29
Syne3-203ENSMUST00000109927 Soga1E1U8D0 1418 aa16.88■□□□□ 0.29
Syne3-203ENSMUST00000109927 Kdm2aP59997 1161 aa16.87■□□□□ 0.29
Syne3-203ENSMUST00000109927 Gm20521D3Z5F7 333 aa16.84■□□□□ 0.29
Syne3-203ENSMUST00000109927 Urb2E9Q7L1 1524 aaKnown RBP16.82■□□□□ 0.28
Syne3-203ENSMUST00000109927 Myt1Q8CFC2 1127 aa16.82■□□□□ 0.28
Syne3-203ENSMUST00000109927 Arid4bA2CG63 1314 aaKnown RBP16.8■□□□□ 0.28
Syne3-203ENSMUST00000109927 Upf2A2AT37 1269 aaKnown RBP16.79■□□□□ 0.28
Syne3-203ENSMUST00000109927 Mia2Q91ZV0 1396 aa16.78■□□□□ 0.28
Syne3-203ENSMUST00000109927 CntlnA2AM05 1397 aa16.78■□□□□ 0.28
Syne3-203ENSMUST00000109927 Polr3glQ8R0C0 218 aa16.78■□□□□ 0.28
Syne3-203ENSMUST00000109927 Exosc9Q9JHI7 438 aaKnown RBP16.77■□□□□ 0.28
Syne3-203ENSMUST00000109927 Jph4Q80WT0 628 aa16.77■□□□□ 0.28
Syne3-203ENSMUST00000109927 Map4P27546 1125 aaKnown RBP16.76■□□□□ 0.27
Syne3-203ENSMUST00000109927 Sall2Q9QX96 1004 aa16.74■□□□□ 0.27
Syne3-203ENSMUST00000109927 Rtl5Q5DTT4 599 aa16.74■□□□□ 0.27
Syne3-203ENSMUST00000109927 Grwd1Q810D6 446 aaKnown RBP16.74■□□□□ 0.27
Syne3-203ENSMUST00000109927 NgefQ8CHT1 710 aa16.72■□□□□ 0.27
Syne3-203ENSMUST00000109927 Fyco1Q8VDC1 1437 aa16.72■□□□□ 0.27
Syne3-203ENSMUST00000109927 Stag3O70576 1240 aa16.72■□□□□ 0.27
Syne3-203ENSMUST00000109927 Efcab5A0JP43 1406 aa16.71■□□□□ 0.27
Syne3-203ENSMUST00000109927 WrnO09053 1401 aa16.71■□□□□ 0.26
Syne3-203ENSMUST00000109927 4930567H17RikQ3V0K5 233 aa16.7■□□□□ 0.26
Syne3-203ENSMUST00000109927 Kif3bQ61771 747 aa16.7■□□□□ 0.26
Syne3-203ENSMUST00000109927 Frmpd1A2AKB4 1549 aa16.7■□□□□ 0.26
Syne3-203ENSMUST00000109927 Ggt6Q6PDE7 497 aa16.7■□□□□ 0.26
Syne3-203ENSMUST00000109927 Psme1P97371 249 aa16.69■□□□□ 0.26
Syne3-203ENSMUST00000109927 Txndc2Q6P902 515 aa16.69■□□□□ 0.26
Syne3-203ENSMUST00000109927 Anp32aO35381 247 aa16.68■□□□□ 0.26
Syne3-203ENSMUST00000109927 Sart1Q9Z315 806 aaKnown RBP16.67■□□□□ 0.26
Syne3-203ENSMUST00000109927 Fgd6Q69ZL1 1399 aa16.66■□□□□ 0.26
Syne3-203ENSMUST00000109927 Cwc22Q8C5N3 908 aaKnown RBP16.64■□□□□ 0.25
Syne3-203ENSMUST00000109927 Card11Q8CIS0 1159 aa16.63■□□□□ 0.25
Syne3-203ENSMUST00000109927 Cabp1Q9JLK7 227 aa16.63■□□□□ 0.25
Syne3-203ENSMUST00000109927 Ncoa2Q61026 1462 aa16.62■□□□□ 0.25
Syne3-203ENSMUST00000109927 Zfp777B9EKF4 885 aa16.62■□□□□ 0.25
Syne3-203ENSMUST00000109927 Mrs2Q5NCE8 434 aa16.61■□□□□ 0.25
Syne3-203ENSMUST00000109927 BicraF8VPZ9 1578 aa16.61■□□□□ 0.25
Syne3-203ENSMUST00000109927 Cc2d2aQ8CFW7 1633 aa16.59■□□□□ 0.25
Syne3-203ENSMUST00000109927 Dnajc5bQ9CQ94 199 aa16.59■□□□□ 0.25
Syne3-203ENSMUST00000109927 Rapgef2Q8CHG7 1496 aa16.58■□□□□ 0.25
Syne3-203ENSMUST00000109927 Duox2A2AQ99 1517 aa16.58■□□□□ 0.24
Syne3-203ENSMUST00000109927 Ift140E9PY46 1464 aa16.56■□□□□ 0.24
Syne3-203ENSMUST00000109927 Rad54l2Q99NG0 1466 aa16.55■□□□□ 0.24
Syne3-203ENSMUST00000109927 Plekhh2Q8C115 1491 aa16.55■□□□□ 0.24
Syne3-203ENSMUST00000109927 Cc2d2bA0A286YDU8 1405 aa16.55■□□□□ 0.24
Syne3-203ENSMUST00000109927 HdgfP51859 237 aaKnown RBP16.54■□□□□ 0.24
Syne3-203ENSMUST00000109927 Wdr62Q3U3T8 1523 aa16.54■□□□□ 0.24
Syne3-203ENSMUST00000109927 PogzQ8BZH4 1409 aaKnown RBP16.53■□□□□ 0.24
Syne3-203ENSMUST00000109927 Shroom4Q1W617 1475 aa16.53■□□□□ 0.24
Syne3-203ENSMUST00000109927 Csrnp3P59055 597 aa16.53■□□□□ 0.24
Syne3-203ENSMUST00000109927 Trak1Q6PD31 939 aa16.53■□□□□ 0.24
Syne3-203ENSMUST00000109927 CadpsQ80TJ1 1355 aa16.52■□□□□ 0.24
Syne3-203ENSMUST00000109927 Stk26Q99JT2 416 aa16.52■□□□□ 0.23
Syne3-203ENSMUST00000109927 Pkd2O35245 966 aa16.51■□□□□ 0.23
Syne3-203ENSMUST00000109927 Arhgap35Q91YM2 1499 aa16.51■□□□□ 0.23
Syne3-203ENSMUST00000109927 Nup155Q99P88 1391 aaKnown RBP16.51■□□□□ 0.23
Syne3-203ENSMUST00000109927 Rad21Q61550 635 aaKnown RBP16.5■□□□□ 0.23
Syne3-203ENSMUST00000109927 Ccnb3Q810T2 1396 aa16.49■□□□□ 0.23
Syne3-203ENSMUST00000109927 Rangap1P46061 589 aaKnown RBP16.49■□□□□ 0.23
Syne3-203ENSMUST00000109927 DaxxO35613 739 aa16.48■□□□□ 0.23
Syne3-203ENSMUST00000109927 Polr1aO35134 1717 aaKnown RBP16.48■□□□□ 0.23
Syne3-203ENSMUST00000109927 Plb1Q3TTY0 1478 aa16.48■□□□□ 0.23
Syne3-203ENSMUST00000109927 Gm38655A0A286YDK6 273 aa16.47■□□□□ 0.23
Syne3-203ENSMUST00000109927 Anks4bQ8K3X6 423 aa16.47■□□□□ 0.23
Syne3-203ENSMUST00000109927 Gm14025A2AP89 1413 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms