RNA–Protein interactions for RNA: ENSMUST00000108173.9

Rffl-206, Transcript of E3 ubiquitin-protein ligase rififylin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rffl, Length 3,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rffl-206ENSMUST00000108173 Ccdc18Q640L5 1455 aa22.41■■□□□ 1.18
Rffl-206ENSMUST00000108173 Arhgef5E9Q7D5 1581 aa22.4■■□□□ 1.18
Rffl-206ENSMUST00000108173 Eif5bQ05D44 1216 aaKnown RBP22.39■■□□□ 1.17
Rffl-206ENSMUST00000108173 Shroom4Q1W617 1475 aa22.38■■□□□ 1.17
Rffl-206ENSMUST00000108173 Naip1Q9QWK5 1403 aa22.37■■□□□ 1.17
Rffl-206ENSMUST00000108173 NrkQ9R0G8 1455 aa22.36■■□□□ 1.17
Rffl-206ENSMUST00000108173 Tnnt3Q9QZ47 272 aa22.36■■□□□ 1.17
Rffl-206ENSMUST00000108173 Ercc6F8VPZ5 1481 aa22.35■■□□□ 1.17
Rffl-206ENSMUST00000108173 Eif4g1Q6NZJ6 1600 aaKnown RBP22.34■■□□□ 1.17
Rffl-206ENSMUST00000108173 Fam71e1A1L3C1 212 aa22.33■■□□□ 1.17
Rffl-206ENSMUST00000108173 Cux2P70298 1426 aa22.28■■□□□ 1.16
Rffl-206ENSMUST00000108173 Aebp1Q640N1 1128 aa22.28■■□□□ 1.16
Rffl-206ENSMUST00000108173 Stra8P70278 393 aa22.25■■□□□ 1.15
Rffl-206ENSMUST00000108173 Wdr62Q3U3T8 1523 aa22.24■■□□□ 1.15
Rffl-206ENSMUST00000108173 TnnQ80Z71 1560 aa22.24■■□□□ 1.15
Rffl-206ENSMUST00000108173 Camsap1A2AHC3 1581 aa22.22■■□□□ 1.15
Rffl-206ENSMUST00000108173 Tiam1Q60610 1591 aa22.22■■□□□ 1.15
Rffl-206ENSMUST00000108173 Grin2bQ01097 1482 aa22.22■■□□□ 1.15
Rffl-206ENSMUST00000108173 Mroh2bQ7M6Y6 1581 aa22.21■■□□□ 1.15
Rffl-206ENSMUST00000108173 Lamc3Q9R0B6 1581 aa22.18■■□□□ 1.14
Rffl-206ENSMUST00000108173 Rpap1Q80TE0 1409 aa22.16■■□□□ 1.14
Rffl-206ENSMUST00000108173 Slx4Q6P1D7 1565 aa22.15■■□□□ 1.14
Rffl-206ENSMUST00000108173 CntlnA2AM05 1397 aa22.12■■□□□ 1.13
Rffl-206ENSMUST00000108173 P3h3Q8CG70 732 aa22.12■■□□□ 1.13
Rffl-206ENSMUST00000108173 Kdm5bQ80Y84 1544 aa22.12■■□□□ 1.13
Rffl-206ENSMUST00000108173 Pcf11G3X9Z4 1553 aa22.12■■□□□ 1.13
Rffl-206ENSMUST00000108173 3425401B19RikD3Z1D3 1412 aa22.11■■□□□ 1.13
Rffl-206ENSMUST00000108173 Zbtb7cQ8VCZ7 619 aa22.11■■□□□ 1.13
Rffl-206ENSMUST00000108173 Znf710Q3U288 666 aa22.11■■□□□ 1.13
Rffl-206ENSMUST00000108173 Map3k1P53349 1493 aa22.1■■□□□ 1.13
Rffl-206ENSMUST00000108173 Carmil1Q6EDY6 1374 aa22.1■■□□□ 1.13
Rffl-206ENSMUST00000108173 Calr4Q3TQS0 420 aa22.1■■□□□ 1.13
Rffl-206ENSMUST00000108173 Ankrd26Q811D2 1581 aa22.09■■□□□ 1.13
Rffl-206ENSMUST00000108173 Ccer2J3QPU5 274 aa22.09■■□□□ 1.13
Rffl-206ENSMUST00000108173 Gm13697A2AK42 830 aa22.09■■□□□ 1.13
Rffl-206ENSMUST00000108173 Cux1P53564 1515 aa22.09■■□□□ 1.13
Rffl-206ENSMUST00000108173 LrpprcQ6PB66 1392 aaKnown RBP22.08■■□□□ 1.13
Rffl-206ENSMUST00000108173 Fyco1Q8VDC1 1437 aa22.06■■□□□ 1.12
Rffl-206ENSMUST00000108173 Zbtb4Q5F293 982 aa22.05■■□□□ 1.12
Rffl-206ENSMUST00000108173 Mrs2Q5NCE8 434 aa22.04■■□□□ 1.12
Rffl-206ENSMUST00000108173 Rad54l2Q99NG0 1466 aa22.04■■□□□ 1.12
Rffl-206ENSMUST00000108173 Phldb1Q6PDH0 1371 aaKnown RBP22.01■■□□□ 1.11
Rffl-206ENSMUST00000108173 Mia2Q91ZV0 1396 aa22.01■■□□□ 1.11
Rffl-206ENSMUST00000108173 Wwc2Q6NXJ0 1187 aa22■■□□□ 1.11
Rffl-206ENSMUST00000108173 Dhx29Q6PGC1 1365 aaKnown RBP22■■□□□ 1.11
Rffl-206ENSMUST00000108173 Ccnb3Q810T2 1396 aa22■■□□□ 1.11
Rffl-206ENSMUST00000108173 Anp32aO35381 247 aa21.98■■□□□ 1.11
Rffl-206ENSMUST00000108173 Duox2A2AQ99 1517 aa21.98■■□□□ 1.11
Rffl-206ENSMUST00000108173 Zfp644E9QA22 1323 aa21.97■■□□□ 1.11
Rffl-206ENSMUST00000108173 NrdcQ8BHG1 1161 aa21.97■■□□□ 1.11
Rffl-206ENSMUST00000108173 Cabp1Q9JLK7 227 aa21.97■■□□□ 1.11
Rffl-206ENSMUST00000108173 Fkbp15Q6P9Q6 1216 aaKnown RBP21.96■■□□□ 1.11
Rffl-206ENSMUST00000108173 Mphosph9A6H5Y1 991 aa21.94■■□□□ 1.1
Rffl-206ENSMUST00000108173 Efcab5A0JP43 1406 aa21.93■■□□□ 1.1
Rffl-206ENSMUST00000108173 Ppp4r2Q0VGB7 417 aa21.93■■□□□ 1.1
Rffl-206ENSMUST00000108173 Nolc1E9Q5C9 702 aaKnown RBP21.92■■□□□ 1.1
Rffl-206ENSMUST00000108173 Fhad1A6PWD2 1420 aa21.91■■□□□ 1.1
Rffl-206ENSMUST00000108173 TchhA0A0B4J1F9 1599 aa21.91■■□□□ 1.1
Rffl-206ENSMUST00000108173 Rgl3Q3UYI5 709 aa21.89■■□□□ 1.09
Rffl-206ENSMUST00000108173 Kif27Q7M6Z4 1394 aa21.88■■□□□ 1.09
Rffl-206ENSMUST00000108173 Gm7298A0A0N4SVU1 1476 aa21.88■■□□□ 1.09
Rffl-206ENSMUST00000108173 Pkd2O35245 966 aa21.87■■□□□ 1.09
Rffl-206ENSMUST00000108173 PogzQ8BZH4 1409 aaKnown RBP21.87■■□□□ 1.09
Rffl-206ENSMUST00000108173 Myt1Q8CFC2 1127 aa21.83■■□□□ 1.09
Rffl-206ENSMUST00000108173 Unc13aQ4KUS2 1712 aa21.83■■□□□ 1.08
Rffl-206ENSMUST00000108173 Smg6P61406 1418 aaKnown RBP21.82■■□□□ 1.08
Rffl-206ENSMUST00000108173 Naip2Q9QUK4 1447 aa21.82■■□□□ 1.08
Rffl-206ENSMUST00000108173 A2mQ6GQT1 1474 aa21.82■■□□□ 1.08
Rffl-206ENSMUST00000108173 Vps8Q0P5W1 1427 aa21.82■■□□□ 1.08
Rffl-206ENSMUST00000108173 Arhgap27A2AB59 869 aa21.8■■□□□ 1.08
Rffl-206ENSMUST00000108173 Exoc6Q8R313 802 aa21.8■■□□□ 1.08
Rffl-206ENSMUST00000108173 UacaQ8CGB3 1411 aa21.8■■□□□ 1.08
Rffl-206ENSMUST00000108173 Grwd1Q810D6 446 aaKnown RBP21.79■■□□□ 1.08
Rffl-206ENSMUST00000108173 Gm1043A0A140LJC2 1431 aa21.79■■□□□ 1.08
Rffl-206ENSMUST00000108173 Ankrd36D3Z4K0 1415 aa21.78■■□□□ 1.08
Rffl-206ENSMUST00000108173 Urb2E9Q7L1 1524 aaKnown RBP21.77■■□□□ 1.08
Rffl-206ENSMUST00000108173 Erich3F6QRE9 1637 aa21.77■■□□□ 1.08
Rffl-206ENSMUST00000108173 Slc4a3P16283 1227 aa21.76■■□□□ 1.07
Rffl-206ENSMUST00000108173 Usp47Q8BY87 1376 aa21.72■■□□□ 1.07
Rffl-206ENSMUST00000108173 Lmo7E9PYF4 1699 aaKnown RBP21.71■■□□□ 1.07
Rffl-206ENSMUST00000108173 Wdr43Q6ZQL4 677 aaKnown RBP21.7■■□□□ 1.06
Rffl-206ENSMUST00000108173 Ttbk1Q6PCN3 1308 aa21.68■■□□□ 1.06
Rffl-206ENSMUST00000108173 Slc4a2P13808 1237 aaKnown RBP21.68■■□□□ 1.06
Rffl-206ENSMUST00000108173 Samd9lQ69Z37 1561 aa21.67■■□□□ 1.06
Rffl-206ENSMUST00000108173 Naip5Q9R016 1403 aa21.66■■□□□ 1.06
Rffl-206ENSMUST00000108173 SynmQ70IV5 1561 aa21.65■■□□□ 1.06
Rffl-206ENSMUST00000108173 Trak1Q6PD31 939 aa21.65■■□□□ 1.06
Rffl-206ENSMUST00000108173 CadpsQ80TJ1 1355 aa21.64■■□□□ 1.06
Rffl-206ENSMUST00000108173 EprsQ8CGC7 1512 aaKnown RBP21.64■■□□□ 1.05
Rffl-206ENSMUST00000108173 Supt16hQ920B9 1047 aa21.63■■□□□ 1.05
Rffl-206ENSMUST00000108173 WrnO09053 1401 aa21.61■■□□□ 1.05
Rffl-206ENSMUST00000108173 Mtus2Q3UHD3 1353 aa21.61■■□□□ 1.05
Rffl-206ENSMUST00000108173 Rundc1Q0VDN7 615 aa21.6■■□□□ 1.05
Rffl-206ENSMUST00000108173 Ncoa2Q61026 1462 aa21.58■■□□□ 1.05
Rffl-206ENSMUST00000108173 Ofd1Q80Z25 1017 aa21.58■■□□□ 1.04
Rffl-206ENSMUST00000108173 Gpatch8A2A6A1 1505 aa21.57■■□□□ 1.04
Rffl-206ENSMUST00000108173 Rad21Q61550 635 aaKnown RBP21.55■■□□□ 1.04
Rffl-206ENSMUST00000108173 Card11Q8CIS0 1159 aa21.55■■□□□ 1.04
Rffl-206ENSMUST00000108173 NexmifQ5DTT1 1515 aa21.55■■□□□ 1.04
Rffl-206ENSMUST00000108173 Ifnlr1Q8CGK5 535 aa21.54■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms