RNA–Protein interactions for RNA: ENSMUST00000105413.7

Col6a2-202, Transcript of Collagen alpha-2(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a2, Length 4,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2-202ENSMUST00000105413 1700123L14RikQ3V2K7 440 aa18.66■□□□□ 0.58
Col6a2-202ENSMUST00000105413 Calr4Q3TQS0 420 aa18.65■□□□□ 0.58
Col6a2-202ENSMUST00000105413 Mrs2Q5NCE8 434 aa18.65■□□□□ 0.58
Col6a2-202ENSMUST00000105413 Erich6D3Z6S9 713 aa18.64■□□□□ 0.58
Col6a2-202ENSMUST00000105413 Pds5bQ4VA53 1446 aaKnown RBP18.63■□□□□ 0.57
Col6a2-202ENSMUST00000105413 Rapgef2Q8CHG7 1496 aa18.56■□□□□ 0.56
Col6a2-202ENSMUST00000105413 DiexfQ8BTT6 772 aaKnown RBP18.53■□□□□ 0.56
Col6a2-202ENSMUST00000105413 Ppp4r2Q0VGB7 417 aa18.5■□□□□ 0.55
Col6a2-202ENSMUST00000105413 Hspa5P20029 655 aaKnown RBP18.49■□□□□ 0.55
Col6a2-202ENSMUST00000105413 Rgl3Q3UYI5 709 aa18.49■□□□□ 0.55
Col6a2-202ENSMUST00000105413 Prdm10Q3UTQ7 1184 aa18.49■□□□□ 0.55
Col6a2-202ENSMUST00000105413 Gm13697A2AK42 830 aa18.48■□□□□ 0.55
Col6a2-202ENSMUST00000105413 Mia2Q91ZV0 1396 aa18.48■□□□□ 0.55
Col6a2-202ENSMUST00000105413 Hdac5Q9Z2V6 1113 aa18.47■□□□□ 0.55
Col6a2-202ENSMUST00000105413 Nlrp6Q91WS2 869 aa18.47■□□□□ 0.55
Col6a2-202ENSMUST00000105413 Smarca4Q3TKT4 1613 aaKnown RBP18.44■□□□□ 0.54
Col6a2-202ENSMUST00000105413 Clstn2Q9ER65 966 aa18.43■□□□□ 0.54
Col6a2-202ENSMUST00000105413 Cttnbp2B9EJA2 1648 aa18.42■□□□□ 0.54
Col6a2-202ENSMUST00000105413 Wdr43Q6ZQL4 677 aaKnown RBP18.42■□□□□ 0.54
Col6a2-202ENSMUST00000105413 Arhgap27A2AB59 869 aa18.4■□□□□ 0.54
Col6a2-202ENSMUST00000105413 Aebp1Q640N1 1128 aa18.4■□□□□ 0.54
Col6a2-202ENSMUST00000105413 Plppr3Q7TPB0 716 aa18.4■□□□□ 0.54
Col6a2-202ENSMUST00000105413 Atad2bE9Q166 1460 aaKnown RBP18.39■□□□□ 0.53
Col6a2-202ENSMUST00000105413 DaxxO35613 739 aa18.37■□□□□ 0.53
Col6a2-202ENSMUST00000105413 Rad21Q61550 635 aaKnown RBP18.37■□□□□ 0.53
Col6a2-202ENSMUST00000105413 Atp1b4Q99ME6 356 aa18.35■□□□□ 0.53
Col6a2-202ENSMUST00000105413 Baz1bQ9Z277 1479 aa18.34■□□□□ 0.53
Col6a2-202ENSMUST00000105413 Grwd1Q810D6 446 aaKnown RBP18.33■□□□□ 0.53
Col6a2-202ENSMUST00000105413 Upf2A2AT37 1269 aaKnown RBP18.32■□□□□ 0.52
Col6a2-202ENSMUST00000105413 P3h3Q8CG70 732 aa18.31■□□□□ 0.52
Col6a2-202ENSMUST00000105413 CntlnA2AM05 1397 aa18.31■□□□□ 0.52
Col6a2-202ENSMUST00000105413 Mtus2Q3UHD3 1353 aa18.3■□□□□ 0.52
Col6a2-202ENSMUST00000105413 Fyco1Q8VDC1 1437 aa18.3■□□□□ 0.52
Col6a2-202ENSMUST00000105413 Kif27Q7M6Z4 1394 aa18.3■□□□□ 0.52
Col6a2-202ENSMUST00000105413 Polr3glQ8R0C0 218 aa18.3■□□□□ 0.52
Col6a2-202ENSMUST00000105413 Cux2P70298 1426 aa18.3■□□□□ 0.52
Col6a2-202ENSMUST00000105413 Fam71e1A1L3C1 212 aa18.29■□□□□ 0.52
Col6a2-202ENSMUST00000105413 SafbD3YXK2 937 aaKnown RBP18.28■□□□□ 0.52
Col6a2-202ENSMUST00000105413 Card11Q8CIS0 1159 aa18.27■□□□□ 0.51
Col6a2-202ENSMUST00000105413 Ofd1Q80Z25 1017 aa18.26■□□□□ 0.51
Col6a2-202ENSMUST00000105413 Sin3aQ60520 1274 aaKnown RBP18.25■□□□□ 0.51
Col6a2-202ENSMUST00000105413 Cwc22Q8C5N3 908 aaKnown RBP18.25■□□□□ 0.51
Col6a2-202ENSMUST00000105413 Arhgap35Q91YM2 1499 aa18.24■□□□□ 0.51
Col6a2-202ENSMUST00000105413 Pkd2O35245 966 aa18.22■□□□□ 0.51
Col6a2-202ENSMUST00000105413 Carmil1Q6EDY6 1374 aa18.22■□□□□ 0.51
Col6a2-202ENSMUST00000105413 Wwc2Q6NXJ0 1187 aa18.2■□□□□ 0.5
Col6a2-202ENSMUST00000105413 Iqgap2Q3UQ44 1575 aa18.19■□□□□ 0.5
Col6a2-202ENSMUST00000105413 Cabp1Q9JLK7 227 aa18.19■□□□□ 0.5
Col6a2-202ENSMUST00000105413 Phldb1Q6PDH0 1371 aaKnown RBP18.18■□□□□ 0.5
Col6a2-202ENSMUST00000105413 Rrp7aQ9D1C9 280 aaKnown RBP18.17■□□□□ 0.5
Col6a2-202ENSMUST00000105413 Mphosph9A6H5Y1 991 aa18.17■□□□□ 0.5
Col6a2-202ENSMUST00000105413 Rpap1Q80TE0 1409 aa18.15■□□□□ 0.5
Col6a2-202ENSMUST00000105413 Cc2d2aQ8CFW7 1633 aa18.14■□□□□ 0.49
Col6a2-202ENSMUST00000105413 Kdm2aP59997 1161 aa18.14■□□□□ 0.49
Col6a2-202ENSMUST00000105413 Mroh3A0A1D5RM54 893 aa18.13■□□□□ 0.49
Col6a2-202ENSMUST00000105413 Top2aQ01320 1528 aaKnown RBP18.13■□□□□ 0.49
Col6a2-202ENSMUST00000105413 Gm13695A2AK44 830 aa18.12■□□□□ 0.49
Col6a2-202ENSMUST00000105413 LrpprcQ6PB66 1392 aaKnown RBP18.12■□□□□ 0.49
Col6a2-202ENSMUST00000105413 ArxO35085 564 aa18.11■□□□□ 0.49
Col6a2-202ENSMUST00000105413 4930567H17RikQ3V0K5 233 aa18.1■□□□□ 0.49
Col6a2-202ENSMUST00000105413 Map4P27546 1125 aaKnown RBP18.07■□□□□ 0.48
Col6a2-202ENSMUST00000105413 Rundc1Q0VDN7 615 aa18.06■□□□□ 0.48
Col6a2-202ENSMUST00000105413 Trak1Q6PD31 939 aa18.05■□□□□ 0.48
Col6a2-202ENSMUST00000105413 Ccnb3Q810T2 1396 aa18.05■□□□□ 0.48
Col6a2-202ENSMUST00000105413 Rangap1P46061 589 aaKnown RBP18.05■□□□□ 0.48
Col6a2-202ENSMUST00000105413 Exoc6Q8R313 802 aa18.04■□□□□ 0.48
Col6a2-202ENSMUST00000105413 Shroom4Q1W617 1475 aa18■□□□□ 0.47
Col6a2-202ENSMUST00000105413 Gm20521D3Z5F7 333 aa17.99■□□□□ 0.47
Col6a2-202ENSMUST00000105413 Dhx29Q6PGC1 1365 aaKnown RBP17.98■□□□□ 0.47
Col6a2-202ENSMUST00000105413 Srpk2O54781 681 aaKnown RBP17.97■□□□□ 0.47
Col6a2-202ENSMUST00000105413 UacaQ8CGB3 1411 aa17.94■□□□□ 0.46
Col6a2-202ENSMUST00000105413 BicraF8VPZ9 1578 aa17.93■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Trim26Q99PN3 545 aa17.93■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Apbb1Q9QXJ1 710 aa17.93■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Plekhh2Q8C115 1491 aa17.91■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Slc4a3P16283 1227 aa17.91■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Arap1Q4LDD4 1452 aa17.91■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Stk24Q99KH8 431 aa17.91■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Top2bQ64511 1612 aa17.91■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Neurod2Q62414 383 aa17.9■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Efcab5A0JP43 1406 aa17.9■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Naip1Q9QWK5 1403 aa17.9■□□□□ 0.46
Col6a2-202ENSMUST00000105413 CanxP35564 591 aaKnown RBP17.9■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Safb2Q80YR5 991 aaKnown RBP17.89■□□□□ 0.46
Col6a2-202ENSMUST00000105413 Ncapd3Q6ZQK0 1506 aa17.89■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Ifit1bl1D3Z6F0 470 aa17.87■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Trim30dE9PWL0 497 aa17.87■□□□□ 0.45
Col6a2-202ENSMUST00000105413 NrkQ9R0G8 1455 aa17.87■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Smg6P61406 1418 aaKnown RBP17.87■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Usp47Q8BY87 1376 aa17.87■□□□□ 0.45
Col6a2-202ENSMUST00000105413 PtprkP35822 1457 aa17.87■□□□□ 0.45
Col6a2-202ENSMUST00000105413 IqubQ8CDK3 788 aa17.87■□□□□ 0.45
Col6a2-202ENSMUST00000105413 AknaQ80VW7 1404 aa17.86■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Fhad1A6PWD2 1420 aa17.86■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Hsp90aa1P07901 733 aaKnown RBP17.86■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Nup155Q99P88 1391 aaKnown RBP17.85■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Zscan21Q07231 555 aa17.84■□□□□ 0.45
Col6a2-202ENSMUST00000105413 Dhx57Q6P5D3 1388 aaKnown RBP17.84■□□□□ 0.45
Col6a2-202ENSMUST00000105413 WrnO09053 1401 aa17.82■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Ankrd36D3Z4K0 1415 aa17.82■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms