RNA–Protein interactions for RNA: ENSMUST00000105413.7

Col6a2-202, Transcript of Collagen alpha-2(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a2, Length 4,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2-202ENSMUST00000105413 Rhox8Q6VSS7 320 aa24.5■■□□□ 1.51
Col6a2-202ENSMUST00000105413 NischQ80TM9 1593 aa22.97■■□□□ 1.27
Col6a2-202ENSMUST00000105413 Rpgrip1Q9EPQ2 1331 aa22.28■■□□□ 1.16
Col6a2-202ENSMUST00000105413 Ccdc136Q3TVA9 1136 aa22.13■■□□□ 1.13
Col6a2-202ENSMUST00000105413 Ehmt2Q9Z148 1263 aaKnown RBP22.1■■□□□ 1.13
Col6a2-202ENSMUST00000105413 Abcc9P70170 1546 aa21.71■■□□□ 1.07
Col6a2-202ENSMUST00000105413 Trim41Q5NCC3 630 aa21.58■■□□□ 1.04
Col6a2-202ENSMUST00000105413 Cngb1E1AZ71 1325 aa21.56■■□□□ 1.04
Col6a2-202ENSMUST00000105413 Esf1Q3V1V3 845 aaKnown RBP21.45■■□□□ 1.02
Col6a2-202ENSMUST00000105413 Gab3Q8BSM5 595 aa21.39■■□□□ 1.02
Col6a2-202ENSMUST00000105413 Ccdc180J3QNE4 1664 aa21.36■■□□□ 1.01
Col6a2-202ENSMUST00000105413 Abcc8B2RUS7 1588 aa21.24■□□□□ 0.99
Col6a2-202ENSMUST00000105413 Rtl1Q7M732 1744 aa21.23■□□□□ 0.99
Col6a2-202ENSMUST00000105413 Acin1Q9JIX8 1338 aaKnown RBP21.21■□□□□ 0.99
Col6a2-202ENSMUST00000105413 HrcG5E8J6 738 aa21.15■□□□□ 0.98
Col6a2-202ENSMUST00000105413 Zeb1Q64318 1117 aa21.05■□□□□ 0.96
Col6a2-202ENSMUST00000105413 Las1lA2BE28 776 aaKnown RBP20.93■□□□□ 0.94
Col6a2-202ENSMUST00000105413 Wdr66E9Q743 1299 aa20.93■□□□□ 0.94
Col6a2-202ENSMUST00000105413 Npm2Q80W85 207 aa20.89■□□□□ 0.93
Col6a2-202ENSMUST00000105413 Myt1lP97500 1187 aa20.86■□□□□ 0.93
Col6a2-202ENSMUST00000105413 Zcchc6Q5BLK4 1491 aaKnown RBP20.79■□□□□ 0.92
Col6a2-202ENSMUST00000105413 Gm35339A0A140LHH9 1649 aa20.75■□□□□ 0.91
Col6a2-202ENSMUST00000105413 NefmP08553 848 aa20.65■□□□□ 0.9
Col6a2-202ENSMUST00000105413 UbtfP25976 765 aaKnown RBP20.61■□□□□ 0.89
Col6a2-202ENSMUST00000105413 Ube2uB1AUC4 352 aa20.48■□□□□ 0.87
Col6a2-202ENSMUST00000105413 Pcgf6Q99NA9 353 aa20.47■□□□□ 0.87
Col6a2-202ENSMUST00000105413 Il27Q8K3I6 234 aa20.26■□□□□ 0.83
Col6a2-202ENSMUST00000105413 Rb1cc1Q9ESK9 1588 aa20.17■□□□□ 0.82
Col6a2-202ENSMUST00000105413 Supt5hO55201 1082 aaKnown RBP20.15■□□□□ 0.82
Col6a2-202ENSMUST00000105413 Dcaf1Q80TR8 1506 aa20.13■□□□□ 0.81
Col6a2-202ENSMUST00000105413 Mier1Q5UAK0 511 aa20.07■□□□□ 0.8
Col6a2-202ENSMUST00000105413 CenpbP27790 599 aa20■□□□□ 0.79
Col6a2-202ENSMUST00000105413 Ap3b1Q9Z1T1 1105 aa19.98■□□□□ 0.79
Col6a2-202ENSMUST00000105413 Cep164Q5DU05 1446 aa19.98■□□□□ 0.79
Col6a2-202ENSMUST00000105413 Chic1Q8CBW7 227 aa19.98■□□□□ 0.79
Col6a2-202ENSMUST00000105413 Pelp1Q9DBD5 1123 aaKnown RBP19.97■□□□□ 0.79
Col6a2-202ENSMUST00000105413 Cdk11bP24788 784 aaKnown RBP19.96■□□□□ 0.79
Col6a2-202ENSMUST00000105413 Brd4Q9ESU6 1400 aaKnown RBP19.94■□□□□ 0.78
Col6a2-202ENSMUST00000105413 Ppargc1bQ8VHJ7 1014 aa19.89■□□□□ 0.78
Col6a2-202ENSMUST00000105413 Fam50aQ9WV03 339 aaKnown RBP19.85■□□□□ 0.77
Col6a2-202ENSMUST00000105413 Nop58Q6DFW4 536 aaKnown RBP19.84■□□□□ 0.77
Col6a2-202ENSMUST00000105413 TonslQ6NZL6 1363 aa19.8■□□□□ 0.76
Col6a2-202ENSMUST00000105413 NacadQ5SWP3 1504 aa19.79■□□□□ 0.76
Col6a2-202ENSMUST00000105413 Stra8P70278 393 aa19.79■□□□□ 0.76
Col6a2-202ENSMUST00000105413 Baz1aO88379 1555 aa19.78■□□□□ 0.76
Col6a2-202ENSMUST00000105413 Plekhg3Q4VAC9 1341 aa19.74■□□□□ 0.75
Col6a2-202ENSMUST00000105413 Slc24a1Q91WD8 1130 aa19.73■□□□□ 0.75
Col6a2-202ENSMUST00000105413 NclP09405 707 aaKnown RBP19.69■□□□□ 0.74
Col6a2-202ENSMUST00000105413 Kdm5dQ62240 1548 aa19.56■□□□□ 0.72
Col6a2-202ENSMUST00000105413 ClspnQ80YR7 1315 aa19.53■□□□□ 0.72
Col6a2-202ENSMUST00000105413 Sall2Q9QX96 1004 aa19.53■□□□□ 0.72
Col6a2-202ENSMUST00000105413 Lmod2Q3UHZ5 550 aa19.52■□□□□ 0.72
Col6a2-202ENSMUST00000105413 Neurod1Q60867 357 aa19.52■□□□□ 0.72
Col6a2-202ENSMUST00000105413 Npm1Q61937 292 aaKnown RBP19.52■□□□□ 0.72
Col6a2-202ENSMUST00000105413 Clip1Q922J3 1391 aa19.51■□□□□ 0.71
Col6a2-202ENSMUST00000105413 Tnnt3Q9QZ47 272 aa19.46■□□□□ 0.71
Col6a2-202ENSMUST00000105413 Golga3P55937 1487 aa19.44■□□□□ 0.7
Col6a2-202ENSMUST00000105413 Eid3Q3V124 375 aa19.41■□□□□ 0.7
Col6a2-202ENSMUST00000105413 Rsf1E9PWW9 1441 aaKnown RBP19.38■□□□□ 0.69
Col6a2-202ENSMUST00000105413 NrdcQ8BHG1 1161 aa19.35■□□□□ 0.69
Col6a2-202ENSMUST00000105413 Myt1Q8CFC2 1127 aa19.3■□□□□ 0.68
Col6a2-202ENSMUST00000105413 Eif5bQ05D44 1216 aaKnown RBP19.24■□□□□ 0.67
Col6a2-202ENSMUST00000105413 Mapk8ip2Q9ERE9 830 aa19.21■□□□□ 0.67
Col6a2-202ENSMUST00000105413 Anks4bQ8K3X6 423 aa19.19■□□□□ 0.66
Col6a2-202ENSMUST00000105413 Amer1Q7TS75 1132 aa19.18■□□□□ 0.66
Col6a2-202ENSMUST00000105413 Anp32bQ9EST5 272 aaKnown RBP19.17■□□□□ 0.66
Col6a2-202ENSMUST00000105413 Ccdc88bQ4QRL3 1481 aa19.13■□□□□ 0.65
Col6a2-202ENSMUST00000105413 Ubl4bQ9CQ84 188 aa19.1■□□□□ 0.65
Col6a2-202ENSMUST00000105413 Csrnp3P59055 597 aa19.07■□□□□ 0.64
Col6a2-202ENSMUST00000105413 ScribQ80U72 1612 aa19.07■□□□□ 0.64
Col6a2-202ENSMUST00000105413 Aebp2Q9Z248 504 aaKnown RBP19.07■□□□□ 0.64
Col6a2-202ENSMUST00000105413 Setd5Q5XJV7 1441 aa19.06■□□□□ 0.64
Col6a2-202ENSMUST00000105413 BlmO88700 1416 aa19.06■□□□□ 0.64
Col6a2-202ENSMUST00000105413 Ttbk1Q6PCN3 1308 aa19.05■□□□□ 0.64
Col6a2-202ENSMUST00000105413 Crybg2B7ZCC2 1516 aa19.04■□□□□ 0.64
Col6a2-202ENSMUST00000105413 Ccer2J3QPU5 274 aa19.03■□□□□ 0.64
Col6a2-202ENSMUST00000105413 Zbtb7cQ8VCZ7 619 aa19.01■□□□□ 0.63
Col6a2-202ENSMUST00000105413 Sycp2Q9CUU3 1500 aa19.01■□□□□ 0.63
Col6a2-202ENSMUST00000105413 Os9Q8K2C7 672 aa18.98■□□□□ 0.63
Col6a2-202ENSMUST00000105413 Kif15Q6P9L6 1387 aa18.97■□□□□ 0.63
Col6a2-202ENSMUST00000105413 Gm38655A0A286YDK6 273 aa18.97■□□□□ 0.63
Col6a2-202ENSMUST00000105413 NeflP08551 543 aa18.95■□□□□ 0.62
Col6a2-202ENSMUST00000105413 Smarca2Q6DIC0 1577 aa18.94■□□□□ 0.62
Col6a2-202ENSMUST00000105413 Chic2Q9D9G3 165 aa18.91■□□□□ 0.62
Col6a2-202ENSMUST00000105413 Eea1Q8BL66 1411 aa18.91■□□□□ 0.62
Col6a2-202ENSMUST00000105413 Cecr2E9Q2Z1 1453 aa18.9■□□□□ 0.62
Col6a2-202ENSMUST00000105413 Hnrnpul2Q00PI9 745 aaKnown RBP18.87■□□□□ 0.61
Col6a2-202ENSMUST00000105413 Aplp2Q06335 707 aa18.85■□□□□ 0.61
Col6a2-202ENSMUST00000105413 Anp32aO35381 247 aa18.83■□□□□ 0.61
Col6a2-202ENSMUST00000105413 CftrP26361 1476 aa18.83■□□□□ 0.61
Col6a2-202ENSMUST00000105413 Cep162Q6ZQ06 1403 aa18.82■□□□□ 0.6
Col6a2-202ENSMUST00000105413 4933416C03RikQ3V063 378 aa18.81■□□□□ 0.6
Col6a2-202ENSMUST00000105413 Zbtb4Q5F293 982 aa18.81■□□□□ 0.6
Col6a2-202ENSMUST00000105413 Fkbp15Q6P9Q6 1216 aaKnown RBP18.81■□□□□ 0.6
Col6a2-202ENSMUST00000105413 Fmn1Q05860 1466 aa18.81■□□□□ 0.6
Col6a2-202ENSMUST00000105413 Rtl5Q5DTT4 599 aa18.76■□□□□ 0.59
Col6a2-202ENSMUST00000105413 Ccdc18Q640L5 1455 aa18.75■□□□□ 0.59
Col6a2-202ENSMUST00000105413 Ercc6F8VPZ5 1481 aa18.71■□□□□ 0.59
Col6a2-202ENSMUST00000105413 Synj1Q8CHC4 1574 aa18.71■□□□□ 0.59
Col6a2-202ENSMUST00000105413 Ifnlr1Q8CGK5 535 aa18.7■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms