RNA–Protein interactions for RNA: ENSMUST00000095439.10

Syne3-202, Transcript of Nesprin-3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Syne3, Length 3,357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-202ENSMUST00000095439 Ankrd26Q811D2 1581 aa17.04■□□□□ 0.32
Syne3-202ENSMUST00000095439 Map3k1P53349 1493 aa17.04■□□□□ 0.32
Syne3-202ENSMUST00000095439 Mrc2Q64449 1479 aa17.03■□□□□ 0.32
Syne3-202ENSMUST00000095439 Arhgef5E9Q7D5 1581 aa17.03■□□□□ 0.32
Syne3-202ENSMUST00000095439 Fam50aQ9WV03 339 aaKnown RBP17■□□□□ 0.31
Syne3-202ENSMUST00000095439 Carmil1Q6EDY6 1374 aa16.98■□□□□ 0.31
Syne3-202ENSMUST00000095439 Pcf11G3X9Z4 1553 aa16.98■□□□□ 0.31
Syne3-202ENSMUST00000095439 Aebp2Q9Z248 504 aaKnown RBP16.98■□□□□ 0.31
Syne3-202ENSMUST00000095439 Wdr66E9Q743 1299 aa16.97■□□□□ 0.31
Syne3-202ENSMUST00000095439 Plb1Q3TTY0 1478 aa16.96■□□□□ 0.31
Syne3-202ENSMUST00000095439 Naip1Q9QWK5 1403 aa16.96■□□□□ 0.31
Syne3-202ENSMUST00000095439 Crocc2F6XLV1 1638 aa16.96■□□□□ 0.31
Syne3-202ENSMUST00000095439 Sall2Q9QX96 1004 aa16.96■□□□□ 0.31
Syne3-202ENSMUST00000095439 Slx4Q6P1D7 1565 aa16.96■□□□□ 0.31
Syne3-202ENSMUST00000095439 Ncapd3Q6ZQK0 1506 aa16.95■□□□□ 0.3
Syne3-202ENSMUST00000095439 SynmQ70IV5 1561 aa16.93■□□□□ 0.3
Syne3-202ENSMUST00000095439 Aebp1Q640N1 1128 aa16.92■□□□□ 0.3
Syne3-202ENSMUST00000095439 Tiam1Q60610 1591 aa16.91■□□□□ 0.3
Syne3-202ENSMUST00000095439 Urb2E9Q7L1 1524 aaKnown RBP16.88■□□□□ 0.29
Syne3-202ENSMUST00000095439 Las1lA2BE28 776 aaKnown RBP16.86■□□□□ 0.29
Syne3-202ENSMUST00000095439 Rpap1Q80TE0 1409 aa16.85■□□□□ 0.29
Syne3-202ENSMUST00000095439 Erich3F6QRE9 1637 aa16.85■□□□□ 0.29
Syne3-202ENSMUST00000095439 Pla2r1Q62028 1487 aa16.85■□□□□ 0.29
Syne3-202ENSMUST00000095439 TonslQ6NZL6 1363 aa16.83■□□□□ 0.28
Syne3-202ENSMUST00000095439 Lmo7E9PYF4 1699 aaKnown RBP16.82■□□□□ 0.28
Syne3-202ENSMUST00000095439 EprsQ8CGC7 1512 aaKnown RBP16.82■□□□□ 0.28
Syne3-202ENSMUST00000095439 Magi3Q9EQJ9 1476 aa16.81■□□□□ 0.28
Syne3-202ENSMUST00000095439 Chic2Q9D9G3 165 aa16.8■□□□□ 0.28
Syne3-202ENSMUST00000095439 Fyco1Q8VDC1 1437 aa16.8■□□□□ 0.28
Syne3-202ENSMUST00000095439 Grin2aP35436 1464 aa16.79■□□□□ 0.28
Syne3-202ENSMUST00000095439 Disp1Q3TDN0 1521 aa16.79■□□□□ 0.28
Syne3-202ENSMUST00000095439 Arhgap27A2AB59 869 aa16.78■□□□□ 0.28
Syne3-202ENSMUST00000095439 CntlnA2AM05 1397 aa16.77■□□□□ 0.27
Syne3-202ENSMUST00000095439 CadpsQ80TJ1 1355 aa16.76■□□□□ 0.27
Syne3-202ENSMUST00000095439 3425401B19RikD3Z1D3 1412 aa16.76■□□□□ 0.27
Syne3-202ENSMUST00000095439 WizO88286 1684 aaKnown RBP16.75■□□□□ 0.27
Syne3-202ENSMUST00000095439 Ube2uB1AUC4 352 aa16.74■□□□□ 0.27
Syne3-202ENSMUST00000095439 PxdnQ3UQ28 1475 aa16.74■□□□□ 0.27
Syne3-202ENSMUST00000095439 Fkbp15Q6P9Q6 1216 aaKnown RBP16.74■□□□□ 0.27
Syne3-202ENSMUST00000095439 Setd1bQ8CFT2 1985 aa16.73■□□□□ 0.27
Syne3-202ENSMUST00000095439 Gm7298A0A0N4SVU1 1476 aa16.73■□□□□ 0.27
Syne3-202ENSMUST00000095439 Gm1043A0A140LJC2 1431 aa16.71■□□□□ 0.27
Syne3-202ENSMUST00000095439 Gpatch8A2A6A1 1505 aa16.71■□□□□ 0.26
Syne3-202ENSMUST00000095439 Kif27Q7M6Z4 1394 aa16.68■□□□□ 0.26
Syne3-202ENSMUST00000095439 Mapk8ip2Q9ERE9 830 aa16.68■□□□□ 0.26
Syne3-202ENSMUST00000095439 Lrriq1Q0P5X1 1673 aa16.66■□□□□ 0.26
Syne3-202ENSMUST00000095439 Kdm5bQ80Y84 1544 aa16.66■□□□□ 0.26
Syne3-202ENSMUST00000095439 WrnO09053 1401 aa16.66■□□□□ 0.26
Syne3-202ENSMUST00000095439 Ccnb3Q810T2 1396 aa16.65■□□□□ 0.26
Syne3-202ENSMUST00000095439 Polr1aO35134 1717 aaKnown RBP16.65■□□□□ 0.26
Syne3-202ENSMUST00000095439 Abca5Q8K448 1642 aa16.59■□□□□ 0.25
Syne3-202ENSMUST00000095439 Hspa5P20029 655 aaKnown RBP16.58■□□□□ 0.25
Syne3-202ENSMUST00000095439 BC005561E9Q5E2 1589 aa16.58■□□□□ 0.24
Syne3-202ENSMUST00000095439 Abca16E9PWJ7 1678 aa16.58■□□□□ 0.24
Syne3-202ENSMUST00000095439 Ift140E9PY46 1464 aa16.57■□□□□ 0.24
Syne3-202ENSMUST00000095439 Adamts12Q811B3 1600 aa16.56■□□□□ 0.24
Syne3-202ENSMUST00000095439 A2mQ6GQT1 1474 aa16.56■□□□□ 0.24
Syne3-202ENSMUST00000095439 Nup160Q9Z0W3 1402 aaKnown RBP16.55■□□□□ 0.24
Syne3-202ENSMUST00000095439 Neurod1Q60867 357 aa16.54■□□□□ 0.24
Syne3-202ENSMUST00000095439 NexmifQ5DTT1 1515 aa16.54■□□□□ 0.24
Syne3-202ENSMUST00000095439 TchhA0A0B4J1F9 1599 aa16.54■□□□□ 0.24
Syne3-202ENSMUST00000095439 Soga1E1U8D0 1418 aa16.53■□□□□ 0.24
Syne3-202ENSMUST00000095439 ClspnQ80YR7 1315 aa16.52■□□□□ 0.23
Syne3-202ENSMUST00000095439 Peg3Q3URU2 1571 aa16.52■□□□□ 0.23
Syne3-202ENSMUST00000095439 Ncoa3O09000 1398 aa16.51■□□□□ 0.23
Syne3-202ENSMUST00000095439 Cabp1Q9JLK7 227 aa16.51■□□□□ 0.23
Syne3-202ENSMUST00000095439 Zfp644E9QA22 1323 aa16.5■□□□□ 0.23
Syne3-202ENSMUST00000095439 Ifnlr1Q8CGK5 535 aa16.49■□□□□ 0.23
Syne3-202ENSMUST00000095439 Abcc2Q8VI47 1543 aa16.49■□□□□ 0.23
Syne3-202ENSMUST00000095439 Naip2Q9QUK4 1447 aa16.48■□□□□ 0.23
Syne3-202ENSMUST00000095439 NclP09405 707 aaKnown RBP16.48■□□□□ 0.23
Syne3-202ENSMUST00000095439 AknaQ80VW7 1404 aa16.48■□□□□ 0.23
Syne3-202ENSMUST00000095439 Zbtb7cQ8VCZ7 619 aa16.47■□□□□ 0.23
Syne3-202ENSMUST00000095439 Shroom2A2ALU4 1481 aa16.44■□□□□ 0.22
Syne3-202ENSMUST00000095439 Arhgap31A6X8Z5 1425 aa16.44■□□□□ 0.22
Syne3-202ENSMUST00000095439 Mug1P28665 1476 aa16.43■□□□□ 0.22
Syne3-202ENSMUST00000095439 Cc2d2bA0A286YDU8 1405 aa16.41■□□□□ 0.22
Syne3-202ENSMUST00000095439 Arhgef40Q3UPH7 1517 aa16.41■□□□□ 0.22
Syne3-202ENSMUST00000095439 Neo1P97798 1493 aa16.41■□□□□ 0.22
Syne3-202ENSMUST00000095439 Fhad1A6PWD2 1420 aa16.4■□□□□ 0.22
Syne3-202ENSMUST00000095439 Dennd4bQ3U1Y4 1499 aa16.4■□□□□ 0.22
Syne3-202ENSMUST00000095439 Lmtk2Q3TYD6 1471 aa16.39■□□□□ 0.21
Syne3-202ENSMUST00000095439 Kdm6bQ5NCY0 1641 aa16.39■□□□□ 0.21
Syne3-202ENSMUST00000095439 Mia2Q91ZV0 1396 aa16.39■□□□□ 0.21
Syne3-202ENSMUST00000095439 Rapgef6Q5NCJ1 1609 aa16.37■□□□□ 0.21
Syne3-202ENSMUST00000095439 Vps8Q0P5W1 1427 aa16.37■□□□□ 0.21
Syne3-202ENSMUST00000095439 Rusc2Q80U22 1514 aa16.35■□□□□ 0.21
Syne3-202ENSMUST00000095439 Sin3aQ60520 1274 aaKnown RBP16.34■□□□□ 0.21
Syne3-202ENSMUST00000095439 Abcc5Q9R1X5 1436 aa16.34■□□□□ 0.21
Syne3-202ENSMUST00000095439 Pbrm1Q8BSQ9 1634 aaKnown RBP16.33■□□□□ 0.21
Syne3-202ENSMUST00000095439 Nop58Q6DFW4 536 aaKnown RBP16.33■□□□□ 0.2
Syne3-202ENSMUST00000095439 Jph4Q80WT0 628 aa16.33■□□□□ 0.2
Syne3-202ENSMUST00000095439 Mphosph9A6H5Y1 991 aa16.32■□□□□ 0.2
Syne3-202ENSMUST00000095439 Prex2Q3LAC4 1598 aa16.32■□□□□ 0.2
Syne3-202ENSMUST00000095439 Tdrd9Q14BI7 1383 aa16.31■□□□□ 0.2
Syne3-202ENSMUST00000095439 Arhgef11Q68FM7 1552 aa16.31■□□□□ 0.2
Syne3-202ENSMUST00000095439 Zcchc11B2RX14 1644 aaKnown RBP16.3■□□□□ 0.2
Syne3-202ENSMUST00000095439 Mroh2aD3Z750 1679 aa16.3■□□□□ 0.2
Syne3-202ENSMUST00000095439 Gcc2Q8CHG3 1679 aa16.29■□□□□ 0.2
Syne3-202ENSMUST00000095439 Mtus2Q3UHD3 1353 aa16.28■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 114.2 ms