RNA–Protein interactions for RNA: ENSMUST00000095439.10

Syne3-202, Transcript of Nesprin-3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Syne3, Length 3,357 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-202ENSMUST00000095439 NischQ80TM9 1593 aa22.66■■□□□ 1.22
Syne3-202ENSMUST00000095439 Gm35339A0A140LHH9 1649 aa22.08■■□□□ 1.12
Syne3-202ENSMUST00000095439 Abcc9P70170 1546 aa21.87■■□□□ 1.09
Syne3-202ENSMUST00000095439 Abcc8B2RUS7 1588 aa21.54■■□□□ 1.04
Syne3-202ENSMUST00000095439 Rhox8Q6VSS7 320 aa21.21■□□□□ 0.99
Syne3-202ENSMUST00000095439 ScribQ80U72 1612 aa20.3■□□□□ 0.84
Syne3-202ENSMUST00000095439 Kdm5dQ62240 1548 aa19.87■□□□□ 0.77
Syne3-202ENSMUST00000095439 Rb1cc1Q9ESK9 1588 aa19.85■□□□□ 0.77
Syne3-202ENSMUST00000095439 Ccdc136Q3TVA9 1136 aa19.78■□□□□ 0.76
Syne3-202ENSMUST00000095439 Rtl1Q7M732 1744 aa19.78■□□□□ 0.76
Syne3-202ENSMUST00000095439 Dcaf1Q80TR8 1506 aa19.71■□□□□ 0.75
Syne3-202ENSMUST00000095439 NacadQ5SWP3 1504 aa19.61■□□□□ 0.73
Syne3-202ENSMUST00000095439 Ccdc180J3QNE4 1664 aa19.53■□□□□ 0.72
Syne3-202ENSMUST00000095439 Zcchc6Q5BLK4 1491 aaKnown RBP19.51■□□□□ 0.71
Syne3-202ENSMUST00000095439 Baz1aO88379 1555 aa19.5■□□□□ 0.71
Syne3-202ENSMUST00000095439 Sycp2Q9CUU3 1500 aa19.23■□□□□ 0.67
Syne3-202ENSMUST00000095439 Smarca2Q6DIC0 1577 aa19.03■□□□□ 0.64
Syne3-202ENSMUST00000095439 Ehmt2Q9Z148 1263 aaKnown RBP18.96■□□□□ 0.63
Syne3-202ENSMUST00000095439 Cecr2E9Q2Z1 1453 aa18.95■□□□□ 0.62
Syne3-202ENSMUST00000095439 Trim41Q5NCC3 630 aa18.94■□□□□ 0.62
Syne3-202ENSMUST00000095439 BicraF8VPZ9 1578 aa18.94■□□□□ 0.62
Syne3-202ENSMUST00000095439 Crybg2B7ZCC2 1516 aa18.92■□□□□ 0.62
Syne3-202ENSMUST00000095439 Cngb1E1AZ71 1325 aa18.88■□□□□ 0.61
Syne3-202ENSMUST00000095439 HrcG5E8J6 738 aa18.76■□□□□ 0.59
Syne3-202ENSMUST00000095439 Esf1Q3V1V3 845 aaKnown RBP18.67■□□□□ 0.58
Syne3-202ENSMUST00000095439 Chic1Q8CBW7 227 aa18.65■□□□□ 0.58
Syne3-202ENSMUST00000095439 Gab3Q8BSM5 595 aa18.64■□□□□ 0.57
Syne3-202ENSMUST00000095439 Synj1Q8CHC4 1574 aa18.62■□□□□ 0.57
Syne3-202ENSMUST00000095439 Brd4Q9ESU6 1400 aaKnown RBP18.59■□□□□ 0.57
Syne3-202ENSMUST00000095439 Rsf1E9PWW9 1441 aaKnown RBP18.48■□□□□ 0.55
Syne3-202ENSMUST00000095439 CftrP26361 1476 aa18.46■□□□□ 0.55
Syne3-202ENSMUST00000095439 Ccdc88bQ4QRL3 1481 aa18.44■□□□□ 0.54
Syne3-202ENSMUST00000095439 Golga3P55937 1487 aa18.37■□□□□ 0.53
Syne3-202ENSMUST00000095439 Cep164Q5DU05 1446 aa18.36■□□□□ 0.53
Syne3-202ENSMUST00000095439 Smarca4Q3TKT4 1613 aaKnown RBP18.34■□□□□ 0.53
Syne3-202ENSMUST00000095439 Cttnbp2B9EJA2 1648 aa18.25■□□□□ 0.51
Syne3-202ENSMUST00000095439 Iqgap2Q3UQ44 1575 aa18.19■□□□□ 0.5
Syne3-202ENSMUST00000095439 Cc2d2aQ8CFW7 1633 aa18.17■□□□□ 0.5
Syne3-202ENSMUST00000095439 Top2bQ64511 1612 aa18.1■□□□□ 0.49
Syne3-202ENSMUST00000095439 Atad2bE9Q166 1460 aaKnown RBP18.08■□□□□ 0.48
Syne3-202ENSMUST00000095439 Acin1Q9JIX8 1338 aaKnown RBP18.06■□□□□ 0.48
Syne3-202ENSMUST00000095439 Pds5bQ4VA53 1446 aaKnown RBP18.02■□□□□ 0.48
Syne3-202ENSMUST00000095439 Il27Q8K3I6 234 aa18.02■□□□□ 0.48
Syne3-202ENSMUST00000095439 Myt1lP97500 1187 aa18■□□□□ 0.47
Syne3-202ENSMUST00000095439 Frmpd1A2AKB4 1549 aa17.91■□□□□ 0.46
Syne3-202ENSMUST00000095439 Npm2Q80W85 207 aa17.89■□□□□ 0.45
Syne3-202ENSMUST00000095439 Fmn1Q05860 1466 aa17.87■□□□□ 0.45
Syne3-202ENSMUST00000095439 Wdr62Q3U3T8 1523 aa17.81■□□□□ 0.44
Syne3-202ENSMUST00000095439 Rpgrip1Q9EPQ2 1331 aa17.78■□□□□ 0.44
Syne3-202ENSMUST00000095439 Ercc6F8VPZ5 1481 aa17.78■□□□□ 0.44
Syne3-202ENSMUST00000095439 Kif15Q6P9L6 1387 aa17.77■□□□□ 0.44
Syne3-202ENSMUST00000095439 Top2aQ01320 1528 aaKnown RBP17.76■□□□□ 0.43
Syne3-202ENSMUST00000095439 Rapgef2Q8CHG7 1496 aa17.75■□□□□ 0.43
Syne3-202ENSMUST00000095439 UbtfP25976 765 aaKnown RBP17.7■□□□□ 0.42
Syne3-202ENSMUST00000095439 Unc13aQ4KUS2 1712 aa17.69■□□□□ 0.42
Syne3-202ENSMUST00000095439 Ubl4bQ9CQ84 188 aa17.66■□□□□ 0.42
Syne3-202ENSMUST00000095439 Cep162Q6ZQ06 1403 aa17.64■□□□□ 0.42
Syne3-202ENSMUST00000095439 PtprkP35822 1457 aa17.63■□□□□ 0.41
Syne3-202ENSMUST00000095439 Ap3b1Q9Z1T1 1105 aa17.62■□□□□ 0.41
Syne3-202ENSMUST00000095439 Dnajc5bQ9CQ94 199 aa17.62■□□□□ 0.41
Syne3-202ENSMUST00000095439 Zeb1Q64318 1117 aa17.61■□□□□ 0.41
Syne3-202ENSMUST00000095439 Mier1Q5UAK0 511 aa17.61■□□□□ 0.41
Syne3-202ENSMUST00000095439 Plekhg3Q4VAC9 1341 aa17.58■□□□□ 0.4
Syne3-202ENSMUST00000095439 TnnQ80Z71 1560 aa17.57■□□□□ 0.4
Syne3-202ENSMUST00000095439 Lamc3Q9R0B6 1581 aa17.53■□□□□ 0.4
Syne3-202ENSMUST00000095439 Thoc2B1AZI6 1594 aaKnown RBP17.51■□□□□ 0.39
Syne3-202ENSMUST00000095439 Phldb1Q6PDH0 1371 aaKnown RBP17.49■□□□□ 0.39
Syne3-202ENSMUST00000095439 Cux2P70298 1426 aa17.49■□□□□ 0.39
Syne3-202ENSMUST00000095439 Npm1Q61937 292 aaKnown RBP17.47■□□□□ 0.39
Syne3-202ENSMUST00000095439 Camsap1A2AHC3 1581 aa17.46■□□□□ 0.39
Syne3-202ENSMUST00000095439 Clip1Q922J3 1391 aa17.44■□□□□ 0.38
Syne3-202ENSMUST00000095439 Arhgap35Q91YM2 1499 aa17.42■□□□□ 0.38
Syne3-202ENSMUST00000095439 Ccdc18Q640L5 1455 aa17.39■□□□□ 0.37
Syne3-202ENSMUST00000095439 Grin2bQ01097 1482 aa17.34■□□□□ 0.37
Syne3-202ENSMUST00000095439 Eif4g1Q6NZJ6 1600 aaKnown RBP17.33■□□□□ 0.37
Syne3-202ENSMUST00000095439 Shroom4Q1W617 1475 aa17.33■□□□□ 0.36
Syne3-202ENSMUST00000095439 Baz1bQ9Z277 1479 aa17.3■□□□□ 0.36
Syne3-202ENSMUST00000095439 NrkQ9R0G8 1455 aa17.29■□□□□ 0.36
Syne3-202ENSMUST00000095439 Supt5hO55201 1082 aaKnown RBP17.28■□□□□ 0.36
Syne3-202ENSMUST00000095439 Pcgf6Q99NA9 353 aa17.27■□□□□ 0.35
Syne3-202ENSMUST00000095439 Lmod2Q3UHZ5 550 aa17.25■□□□□ 0.35
Syne3-202ENSMUST00000095439 Setd5Q5XJV7 1441 aa17.25■□□□□ 0.35
Syne3-202ENSMUST00000095439 Fam135aQ6NS59 1506 aa17.25■□□□□ 0.35
Syne3-202ENSMUST00000095439 LrpprcQ6PB66 1392 aaKnown RBP17.23■□□□□ 0.35
Syne3-202ENSMUST00000095439 Arap1Q4LDD4 1452 aa17.23■□□□□ 0.35
Syne3-202ENSMUST00000095439 Duox2A2AQ99 1517 aa17.18■□□□□ 0.34
Syne3-202ENSMUST00000095439 Dhx29Q6PGC1 1365 aaKnown RBP17.18■□□□□ 0.34
Syne3-202ENSMUST00000095439 Eea1Q8BL66 1411 aa17.17■□□□□ 0.34
Syne3-202ENSMUST00000095439 Mroh2bQ7M6Y6 1581 aa17.17■□□□□ 0.34
Syne3-202ENSMUST00000095439 Rad54l2Q99NG0 1466 aa17.16■□□□□ 0.34
Syne3-202ENSMUST00000095439 Ppargc1bQ8VHJ7 1014 aa17.15■□□□□ 0.34
Syne3-202ENSMUST00000095439 PogzQ8BZH4 1409 aaKnown RBP17.14■□□□□ 0.34
Syne3-202ENSMUST00000095439 AqrQ8CFQ3 1481 aaKnown RBP17.12■□□□□ 0.33
Syne3-202ENSMUST00000095439 NefmP08553 848 aa17.12■□□□□ 0.33
Syne3-202ENSMUST00000095439 Samd9lQ69Z37 1561 aa17.09■□□□□ 0.33
Syne3-202ENSMUST00000095439 Kif21aQ9QXL2 1672 aa17.08■□□□□ 0.32
Syne3-202ENSMUST00000095439 BlmO88700 1416 aa17.06■□□□□ 0.32
Syne3-202ENSMUST00000095439 Cux1P53564 1515 aa17.06■□□□□ 0.32
Syne3-202ENSMUST00000095439 Eid3Q3V124 375 aa17.06■□□□□ 0.32
Syne3-202ENSMUST00000095439 Efcab5A0JP43 1406 aa17.06■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms