RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Gm156Q58A37 223 aa22.3■■□□□ 1.16
Hmgb1-202ENSMUST00000093196 Ms4a5Q810P8 197 aa22.3■■□□□ 1.16
Hmgb1-202ENSMUST00000093196 PtprkP35822 1457 aa22.22■■□□□ 1.15
Hmgb1-202ENSMUST00000093196 Cep170Q6A065 1588 aa22.21■■□□□ 1.15
Hmgb1-202ENSMUST00000093196 Rusc2Q80U22 1514 aa22.2■■□□□ 1.14
Hmgb1-202ENSMUST00000093196 Pprc1Q6NZN1 1644 aa22.17■■□□□ 1.14
Hmgb1-202ENSMUST00000093196 Kif15Q6P9L6 1387 aa22.07■■□□□ 1.12
Hmgb1-202ENSMUST00000093196 Cyb5rlB1AS42 316 aa22.05■■□□□ 1.12
Hmgb1-202ENSMUST00000093196 Gapvd1Q6PAR5 1458 aa22.04■■□□□ 1.12
Hmgb1-202ENSMUST00000093196 Npm1Q61937 292 aaKnown RBP22.03■■□□□ 1.12
Hmgb1-202ENSMUST00000093196 Alpk3Q924C5 1678 aa22■■□□□ 1.11
Hmgb1-202ENSMUST00000093196 CatipB9EKE5 520 aa21.97■■□□□ 1.11
Hmgb1-202ENSMUST00000093196 Hecw2Q6I6G8 1578 aa21.96■■□□□ 1.11
Hmgb1-202ENSMUST00000093196 Ercc6l2Q9JIM3 1537 aa21.91■■□□□ 1.1
Hmgb1-202ENSMUST00000093196 Tcf3P15806 651 aa21.91■■□□□ 1.1
Hmgb1-202ENSMUST00000093196 Dhx29Q6PGC1 1365 aaKnown RBP21.87■■□□□ 1.09
Hmgb1-202ENSMUST00000093196 CftrP26361 1476 aa21.85■■□□□ 1.09
Hmgb1-202ENSMUST00000093196 Cttnbp2B9EJA2 1648 aa21.84■■□□□ 1.09
Hmgb1-202ENSMUST00000093196 Cep164Q5DU05 1446 aa21.81■■□□□ 1.08
Hmgb1-202ENSMUST00000093196 G430095P16RikE9Q913 147 aa21.81■■□□□ 1.08
Hmgb1-202ENSMUST00000093196 GapdhsQ64467 440 aa21.81■■□□□ 1.08
Hmgb1-202ENSMUST00000093196 Ift140E9PY46 1464 aa21.79■■□□□ 1.08
Hmgb1-202ENSMUST00000093196 Ccdc88bQ4QRL3 1481 aa21.77■■□□□ 1.07
Hmgb1-202ENSMUST00000093196 Ppp1r18Q8BQ30 594 aa21.75■■□□□ 1.07
Hmgb1-202ENSMUST00000093196 Crocc2F6XLV1 1638 aa21.75■■□□□ 1.07
Hmgb1-202ENSMUST00000093196 Rapgef2Q8CHG7 1496 aa21.75■■□□□ 1.07
Hmgb1-202ENSMUST00000093196 Ifnlr1Q8CGK5 535 aa21.72■■□□□ 1.07
Hmgb1-202ENSMUST00000093196 Setbp1Q9Z180 1582 aa21.69■■□□□ 1.06
Hmgb1-202ENSMUST00000093196 Synj1Q8CHC4 1574 aa21.65■■□□□ 1.06
Hmgb1-202ENSMUST00000093196 Prdm16A2A935 1275 aa21.65■■□□□ 1.06
Hmgb1-202ENSMUST00000093196 Brwd3A2AHJ4 1799 aa21.64■■□□□ 1.06
Hmgb1-202ENSMUST00000093196 Taok2Q6ZQ29 1240 aa21.62■■□□□ 1.05
Hmgb1-202ENSMUST00000093196 Lamc3Q9R0B6 1581 aa21.61■■□□□ 1.05
Hmgb1-202ENSMUST00000093196 Ythdc2B2RR83 1445 aaKnown RBP21.59■■□□□ 1.05
Hmgb1-202ENSMUST00000093196 Arhgef11Q68FM7 1552 aa21.57■■□□□ 1.04
Hmgb1-202ENSMUST00000093196 Setd1bQ8CFT2 1985 aa21.56■■□□□ 1.04
Hmgb1-202ENSMUST00000093196 MlecQ6ZQI3 291 aaKnown RBP21.54■■□□□ 1.04
Hmgb1-202ENSMUST00000093196 Ak9G3UYQ4 1894 aa21.53■■□□□ 1.04
Hmgb1-202ENSMUST00000093196 Camsap1A2AHC3 1581 aa21.51■■□□□ 1.03
Hmgb1-202ENSMUST00000093196 Fgd6Q69ZL1 1399 aa21.48■■□□□ 1.03
Hmgb1-202ENSMUST00000093196 LrpprcQ6PB66 1392 aaKnown RBP21.48■■□□□ 1.03
Hmgb1-202ENSMUST00000093196 Arid3aQ62431 601 aa21.47■■□□□ 1.03
Hmgb1-202ENSMUST00000093196 AdgbG3UZ78 1657 aa21.46■■□□□ 1.03
Hmgb1-202ENSMUST00000093196 Abcc1O35379 1528 aa21.45■■□□□ 1.02
Hmgb1-202ENSMUST00000093196 MpndQ3TV65 487 aa21.45■■□□□ 1.02
Hmgb1-202ENSMUST00000093196 Disp1Q3TDN0 1521 aa21.45■■□□□ 1.02
Hmgb1-202ENSMUST00000093196 Il27Q8K3I6 234 aa21.41■■□□□ 1.02
Hmgb1-202ENSMUST00000093196 Zbtb12Q9Z150 459 aa21.41■■□□□ 1.02
Hmgb1-202ENSMUST00000093196 Cc2d2bA0A286YDU8 1405 aa21.39■■□□□ 1.02
Hmgb1-202ENSMUST00000093196 Top2aQ01320 1528 aaKnown RBP21.39■■□□□ 1.01
Hmgb1-202ENSMUST00000093196 Rhox8Q6VSS7 320 aa21.38■■□□□ 1.01
Hmgb1-202ENSMUST00000093196 Dnajc5gQ8C632 165 aa21.37■■□□□ 1.01
Hmgb1-202ENSMUST00000093196 Nup160Q9Z0W3 1402 aaKnown RBP21.37■■□□□ 1.01
Hmgb1-202ENSMUST00000093196 Ppp1r37Q8BKR5 712 aa21.35■■□□□ 1.01
Hmgb1-202ENSMUST00000093196 Chd1P40201 1711 aa21.35■■□□□ 1.01
Hmgb1-202ENSMUST00000093196 AknaQ80VW7 1404 aa21.33■■□□□ 1.01
Hmgb1-202ENSMUST00000093196 Fbln2P37889 1221 aa21.33■■□□□ 1.01
Hmgb1-202ENSMUST00000093196 EprsQ8CGC7 1512 aaKnown RBP21.32■■□□□ 1
Hmgb1-202ENSMUST00000093196 Zbtb7aO88939 569 aaKnown RBP21.31■■□□□ 1
Hmgb1-202ENSMUST00000093196 Mapkbp1Q6NS57 1503 aa21.3■■□□□ 1
Hmgb1-202ENSMUST00000093196 Npm3Q9CPP0 175 aaKnown RBP21.29■■□□□ 1
Hmgb1-202ENSMUST00000093196 Ttc37F8VPK0 1563 aa21.27■□□□□ 0.99
Hmgb1-202ENSMUST00000093196 Golga3P55937 1487 aa21.26■□□□□ 0.99
Hmgb1-202ENSMUST00000093196 Esf1Q3V1V3 845 aaKnown RBP21.25■□□□□ 0.99
Hmgb1-202ENSMUST00000093196 Egfem1Q8C088 590 aa21.25■□□□□ 0.99
Hmgb1-202ENSMUST00000093196 Ccdc18Q640L5 1455 aa21.24■□□□□ 0.99
Hmgb1-202ENSMUST00000093196 PogzQ8BZH4 1409 aaKnown RBP21.22■□□□□ 0.99
Hmgb1-202ENSMUST00000093196 Clasp1Q80TV8 1535 aaKnown RBP21.21■□□□□ 0.99
Hmgb1-202ENSMUST00000093196 Pbrm1Q8BSQ9 1634 aaKnown RBP21.21■□□□□ 0.99
Hmgb1-202ENSMUST00000093196 AqrQ8CFQ3 1481 aaKnown RBP21.16■□□□□ 0.98
Hmgb1-202ENSMUST00000093196 Brd4Q9ESU6 1400 aaKnown RBP21.15■□□□□ 0.98
Hmgb1-202ENSMUST00000093196 AI481877A2ALV5 1481 aa21.14■□□□□ 0.98
Hmgb1-202ENSMUST00000093196 CadpsQ80TJ1 1355 aa21.13■□□□□ 0.97
Hmgb1-202ENSMUST00000093196 Fndc1E9Q043 1732 aa21.12■□□□□ 0.97
Hmgb1-202ENSMUST00000093196 Gtpbp6Q3U6U5 514 aa21.1■□□□□ 0.97
Hmgb1-202ENSMUST00000093196 Duox2A2AQ99 1517 aa21.09■□□□□ 0.97
Hmgb1-202ENSMUST00000093196 Soga1E1U8D0 1418 aa21.08■□□□□ 0.97
Hmgb1-202ENSMUST00000093196 Ppp6r1Q7TSI3 856 aa21.06■□□□□ 0.96
Hmgb1-202ENSMUST00000093196 Kdm6bQ5NCY0 1641 aa21.06■□□□□ 0.96
Hmgb1-202ENSMUST00000093196 Depdc5P61460 1591 aa21.05■□□□□ 0.96
Hmgb1-202ENSMUST00000093196 Rnf216P58283 853 aa21.04■□□□□ 0.96
Hmgb1-202ENSMUST00000093196 Grwd1Q810D6 446 aaKnown RBP21.04■□□□□ 0.96
Hmgb1-202ENSMUST00000093196 Samd9lQ69Z37 1561 aa20.98■□□□□ 0.95
Hmgb1-202ENSMUST00000093196 Skida1Q80YR3 822 aa20.95■□□□□ 0.94
Hmgb1-202ENSMUST00000093196 Spock2Q9ER58 423 aa20.92■□□□□ 0.94
Hmgb1-202ENSMUST00000093196 Kif7B7ZNG0 1348 aa20.92■□□□□ 0.94
Hmgb1-202ENSMUST00000093196 Neo1P97798 1493 aa20.92■□□□□ 0.94
Hmgb1-202ENSMUST00000093196 Grin2aP35436 1464 aa20.91■□□□□ 0.94
Hmgb1-202ENSMUST00000093196 Zfyve16Q80U44 1528 aa20.89■□□□□ 0.94
Hmgb1-202ENSMUST00000093196 Abcb7Q61102 752 aaKnown RBP20.86■□□□□ 0.93
Hmgb1-202ENSMUST00000093196 Magi3Q9EQJ9 1476 aa20.86■□□□□ 0.93
Hmgb1-202ENSMUST00000093196 Rad54l2Q99NG0 1466 aa20.85■□□□□ 0.93
Hmgb1-202ENSMUST00000093196 NrkQ9R0G8 1455 aa20.84■□□□□ 0.93
Hmgb1-202ENSMUST00000093196 Skap1Q3UUV5 355 aa20.84■□□□□ 0.93
Hmgb1-202ENSMUST00000093196 Dnmt1P13864 1620 aaKnown RBP20.84■□□□□ 0.93
Hmgb1-202ENSMUST00000093196 TnnQ80Z71 1560 aa20.83■□□□□ 0.92
Hmgb1-202ENSMUST00000093196 Gm14025A2AP89 1413 aa20.82■□□□□ 0.92
Hmgb1-202ENSMUST00000093196 PtprmP28828 1452 aa20.81■□□□□ 0.92
Hmgb1-202ENSMUST00000093196 Arid3cA6PWV5 409 aa20.8■□□□□ 0.92
Hmgb1-202ENSMUST00000093196 Arhgef12Q8R4H2 1543 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms