RNA–Protein interactions for RNA: ENSMUST00000090134.11

Pdlim5-203, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-203ENSMUST00000090134 Nlrp6Q91WS2 869 aa11.73□□□□□ -0.53
Pdlim5-203ENSMUST00000090134 Bach1P97302 739 aa11.72□□□□□ -0.53
Pdlim5-203ENSMUST00000090134 Iqgap2Q3UQ44 1575 aa11.72□□□□□ -0.53
Pdlim5-203ENSMUST00000090134 1700123L14RikQ3V2K7 440 aa11.7□□□□□ -0.54
Pdlim5-203ENSMUST00000090134 Atad2bE9Q166 1460 aaKnown RBP11.69□□□□□ -0.54
Pdlim5-203ENSMUST00000090134 Cnksr2Q80YA9 1032 aa11.69□□□□□ -0.54
Pdlim5-203ENSMUST00000090134 Plcd4Q8K3R3 807 aa11.67□□□□□ -0.54
Pdlim5-203ENSMUST00000090134 Cc2d2aQ8CFW7 1633 aa11.66□□□□□ -0.54
Pdlim5-203ENSMUST00000090134 Esf1Q3V1V3 845 aaKnown RBP11.66□□□□□ -0.54
Pdlim5-203ENSMUST00000090134 Fmn1Q05860 1466 aa11.65□□□□□ -0.54
Pdlim5-203ENSMUST00000090134 CenpbP27790 599 aa11.64□□□□□ -0.55
Pdlim5-203ENSMUST00000090134 Pds5bQ4VA53 1446 aaKnown RBP11.64□□□□□ -0.55
Pdlim5-203ENSMUST00000090134 Znf316Q6PGE4 1016 aa11.61□□□□□ -0.55
Pdlim5-203ENSMUST00000090134 Top2aQ01320 1528 aaKnown RBP11.59□□□□□ -0.55
Pdlim5-203ENSMUST00000090134 Sox12Q04890 314 aa11.58□□□□□ -0.56
Pdlim5-203ENSMUST00000090134 Igsf3Q6ZQA6 1194 aa11.57□□□□□ -0.56
Pdlim5-203ENSMUST00000090134 NclP09405 707 aaKnown RBP11.56□□□□□ -0.56
Pdlim5-203ENSMUST00000090134 Gtf3c3Q3TMP1 882 aa11.55□□□□□ -0.56
Pdlim5-203ENSMUST00000090134 TnnQ80Z71 1560 aa11.54□□□□□ -0.56
Pdlim5-203ENSMUST00000090134 Prm3Q62100 101 aa11.52□□□□□ -0.56
Pdlim5-203ENSMUST00000090134 Rapgef2Q8CHG7 1496 aa11.52□□□□□ -0.57
Pdlim5-203ENSMUST00000090134 Wdr62Q3U3T8 1523 aa11.51□□□□□ -0.57
Pdlim5-203ENSMUST00000090134 Gm13697A2AK42 830 aa11.5□□□□□ -0.57
Pdlim5-203ENSMUST00000090134 Frmpd1A2AKB4 1549 aa11.47□□□□□ -0.57
Pdlim5-203ENSMUST00000090134 Rad21Q61550 635 aaKnown RBP11.46□□□□□ -0.57
Pdlim5-203ENSMUST00000090134 Stag3O70576 1240 aa11.45□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 Cers3Q1A3B0 383 aa11.44□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 Scaf1Q5U4C3 1256 aaKnown RBP11.43□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 Lamc3Q9R0B6 1581 aa11.43□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 Ercc6F8VPZ5 1481 aa11.42□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 Eif4g1Q6NZJ6 1600 aaKnown RBP11.41□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 Rangap1P46061 589 aaKnown RBP11.4□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 Pknox2Q8BG99 474 aa11.4□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 WdpcpQ8C456 722 aa11.4□□□□□ -0.58
Pdlim5-203ENSMUST00000090134 Unc13aQ4KUS2 1712 aa11.39□□□□□ -0.59
Pdlim5-203ENSMUST00000090134 Ythdc1E9Q5K9 736 aaKnown RBP11.39□□□□□ -0.59
Pdlim5-203ENSMUST00000090134 Arid4bA2CG63 1314 aaKnown RBP11.39□□□□□ -0.59
Pdlim5-203ENSMUST00000090134 Irx6Q9ER75 438 aa11.38□□□□□ -0.59
Pdlim5-203ENSMUST00000090134 Cep162Q6ZQ06 1403 aa11.38□□□□□ -0.59
Pdlim5-203ENSMUST00000090134 Ubap1lG3UW59 384 aa11.32□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 Cdca7Q9D0M2 382 aa11.32□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 Thoc2B1AZI6 1594 aaKnown RBP11.32□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 Kiaa1211Q5PR69 1207 aa11.31□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 HomezQ80W88 542 aa11.31□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 Camsap1A2AHC3 1581 aa11.3□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 NrkQ9R0G8 1455 aa11.3□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 NefmP08553 848 aa11.29□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 Tmem132aQ922P8 1018 aa11.29□□□□□ -0.6
Pdlim5-203ENSMUST00000090134 Hsp90b1P08113 802 aaKnown RBP11.27□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Samd1D3YXK1 519 aa11.26□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Kif15Q6P9L6 1387 aa11.25□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Ciz1Q8VEH2 845 aa11.25□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Map3k1P53349 1493 aa11.24□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Shroom4Q1W617 1475 aa11.24□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Arhgap35Q91YM2 1499 aa11.23□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 MyclP10166 368 aa11.23□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Hmgb1P63158 215 aaKnown RBP11.23□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Phldb1Q6PDH0 1371 aaKnown RBP11.22□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Fam135aQ6NS59 1506 aa11.22□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Ccdc18Q640L5 1455 aa11.21□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Znf704Q9ERQ3 566 aa11.21□□□□□ -0.61
Pdlim5-203ENSMUST00000090134 Npm1Q61937 292 aaKnown RBP11.19□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 Pcgf6Q99NA9 353 aa11.19□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 PtprkP35822 1457 aa11.19□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 Grin2bQ01097 1482 aa11.19□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 Skap1Q3UUV5 355 aa11.18□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 NrdcQ8BHG1 1161 aa11.18□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 Mier1Q5UAK0 511 aa11.16□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 Slc4a5E9Q3M5 1116 aa11.15□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 Zbtb38Q3LR78 1197 aa11.15□□□□□ -0.62
Pdlim5-203ENSMUST00000090134 Gpatch11Q3UFS4 262 aa11.15□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Baz1bQ9Z277 1479 aa11.14□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Clip1Q922J3 1391 aa11.14□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 AqrQ8CFQ3 1481 aaKnown RBP11.14□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Irx3P81067 507 aa11.12□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Plcd3Q8K2J0 785 aa11.12□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Mroh2bQ7M6Y6 1581 aa11.12□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 DaxxO35613 739 aa11.11□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Dnajc5P60904 198 aa11.11□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Myt1lP97500 1187 aa11.11□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Egfem1Q8C088 590 aa11.11□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Erich3F6QRE9 1637 aa11.11□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Eea1Q8BL66 1411 aa11.1□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Ifnlr1Q8CGK5 535 aa11.1□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Cux2P70298 1426 aa11.1□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Arap1Q4LDD4 1452 aa11.09□□□□□ -0.63
Pdlim5-203ENSMUST00000090134 Arhgef5E9Q7D5 1581 aa11.08□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Grwd1Q810D6 446 aaKnown RBP11.08□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Efcab5A0JP43 1406 aa11.08□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Brd2Q7JJ13 798 aaKnown RBP11.07□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 G430095P16RikE9Q913 147 aa11.06□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Spryd3E9Q9B3 442 aa11.06□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Zbtb7aO88939 569 aaKnown RBP11.06□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Fgd1P52734 960 aa11.06□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Skida1Q80YR3 822 aa11.06□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Styxl1Q9DAR2 321 aa11.06□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 PogzQ8BZH4 1409 aaKnown RBP11.04□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Gtf3c6Q9D8P7 227 aa11.04□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Ankrd26Q811D2 1581 aa11.04□□□□□ -0.64
Pdlim5-203ENSMUST00000090134 Kdm2aP59997 1161 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 68.9 ms