RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Irx3P81067 507 aa13.03□□□□□ -0.32
Col4a4-201ENSMUST00000087050 Gm13695A2AK44 830 aa13.03□□□□□ -0.32
Col4a4-201ENSMUST00000087050 PtmaP26350 111 aa13.03□□□□□ -0.32
Col4a4-201ENSMUST00000087050 Mrs2Q5NCE8 434 aa13.02□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Ppm1gQ61074 542 aa13.02□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Chic1Q8CBW7 227 aa13.01□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Eid3Q3V124 375 aa13.01□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Chmp4bQ9D8B3 224 aaKnown RBP13□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Tnnt2P50752 301 aa13□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Mapk8ip2Q9ERE9 830 aa12.99□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Fgd1P52734 960 aa12.98□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Zbtb4Q5F293 982 aa12.98□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Trim30dE9PWL0 497 aa12.97□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Mbd3Q9Z2D8 285 aaKnown RBP12.97□□□□□ -0.33
Col4a4-201ENSMUST00000087050 Map7O88735 730 aa12.95□□□□□ -0.34
Col4a4-201ENSMUST00000087050 Rad21Q61550 635 aaKnown RBP12.94□□□□□ -0.34
Col4a4-201ENSMUST00000087050 BlmO88700 1416 aa12.92□□□□□ -0.34
Col4a4-201ENSMUST00000087050 PtmsQ9D0J8 101 aaKnown RBP12.9□□□□□ -0.34
Col4a4-201ENSMUST00000087050 Cwc22Q8C5N3 908 aaKnown RBP12.89□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Prdm10Q3UTQ7 1184 aa12.89□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Baz1aO88379 1555 aa12.88□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Ofd1Q80Z25 1017 aa12.88□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Calcoco2A2A6M5 331 aa12.87□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Plcb2A3KGF7 1181 aa12.87□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Vsig10D3YX43 558 aa12.86□□□□□ -0.35
Col4a4-201ENSMUST00000087050 AU015836B2RUM3 263 aa12.86□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Mia2Q91ZV0 1396 aa12.85□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Zfp777B9EKF4 885 aa12.84□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Setd5Q5XJV7 1441 aa12.84□□□□□ -0.35
Col4a4-201ENSMUST00000087050 Eea1Q8BL66 1411 aa12.82□□□□□ -0.36
Col4a4-201ENSMUST00000087050 Casc1Q6TDU8 730 aa12.82□□□□□ -0.36
Col4a4-201ENSMUST00000087050 Gm973E9Q295 1059 aa12.81□□□□□ -0.36
Col4a4-201ENSMUST00000087050 PnnO35691 725 aaKnown RBP12.81□□□□□ -0.36
Col4a4-201ENSMUST00000087050 Znf326O88291 580 aa12.8□□□□□ -0.36
Col4a4-201ENSMUST00000087050 Golga3P55937 1487 aa12.79□□□□□ -0.36
Col4a4-201ENSMUST00000087050 KnstrnQ9D9Z1 312 aaKnown RBP12.79□□□□□ -0.36
Col4a4-201ENSMUST00000087050 4933402E13RikQ9D4D2 429 aa12.78□□□□□ -0.36
Col4a4-201ENSMUST00000087050 MccE9PWI3 1003 aa12.76□□□□□ -0.37
Col4a4-201ENSMUST00000087050 Arid4bA2CG63 1314 aaKnown RBP12.76□□□□□ -0.37
Col4a4-201ENSMUST00000087050 Ccdc18Q640L5 1455 aa12.75□□□□□ -0.37
Col4a4-201ENSMUST00000087050 NudcO35685 332 aaKnown RBP12.75□□□□□ -0.37
Col4a4-201ENSMUST00000087050 MsnP26041 577 aaKnown RBP12.75□□□□□ -0.37
Col4a4-201ENSMUST00000087050 IqubQ8CDK3 788 aa12.74□□□□□ -0.37
Col4a4-201ENSMUST00000087050 NacadQ5SWP3 1504 aa12.74□□□□□ -0.37
Col4a4-201ENSMUST00000087050 Mapk8ip3Q9ESN9 1337 aa12.73□□□□□ -0.37
Col4a4-201ENSMUST00000087050 Chic2Q9D9G3 165 aa12.73□□□□□ -0.37
Col4a4-201ENSMUST00000087050 Tcerg1Q8CGF7 1100 aaKnown RBP12.72□□□□□ -0.37
Col4a4-201ENSMUST00000087050 Rangap1P46061 589 aaKnown RBP12.71□□□□□ -0.37
Col4a4-201ENSMUST00000087050 Ifnlr1Q8CGK5 535 aa12.71□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Iqcf3Q9D498 203 aa12.71□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Rgl3Q3UYI5 709 aa12.69□□□□□ -0.38
Col4a4-201ENSMUST00000087050 SetQ9EQU5 289 aaKnown RBP12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Mtus2Q3UHD3 1353 aa12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Rrp12Q6P5B0 1295 aaKnown RBP12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Dnttip2Q8R2M2 758 aaKnown RBP12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Mak16Q8BGS0 296 aaKnown RBP12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 HnrnpuQ8VEK3 800 aaKnown RBP12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Fhad1A6PWD2 1420 aa12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Card11Q8CIS0 1159 aa12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Rsf1E9PWW9 1441 aaKnown RBP12.68□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Wwc2Q6NXJ0 1187 aa12.67□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Trim26Q99PN3 545 aa12.67□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Znf316Q6PGE4 1016 aa12.67□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Pde3bQ61409 1100 aa12.67□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Cald1E9QA15 768 aaKnown RBP12.66□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Map7d2A2AG50 781 aa12.66□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Ipo9Q91YE6 1041 aa12.65□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Dnai1Q8C0M8 701 aa12.65□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Pknox2Q8BG99 474 aa12.65□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Erich6bQ9D4S6 220 aa12.65□□□□□ -0.38
Col4a4-201ENSMUST00000087050 Rwdd1Q9CQK7 243 aa12.65□□□□□ -0.39
Col4a4-201ENSMUST00000087050 RdxP26043 583 aaKnown RBP12.64□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Ercc6F8VPZ5 1481 aa12.63□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Pes1Q9EQ61 584 aaKnown RBP12.63□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Gtf3c3Q3TMP1 882 aa12.63□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Srpk2O54781 681 aaKnown RBP12.63□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Exosc9Q9JHI7 438 aaKnown RBP12.62□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Ddrgk1Q80WW9 315 aa12.61□□□□□ -0.39
Col4a4-201ENSMUST00000087050 EspnQ9ET47 871 aa12.61□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Aebp2Q9Z248 504 aaKnown RBP12.6□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Hsp90b1P08113 802 aaKnown RBP12.59□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Fkbp15Q6P9Q6 1216 aaKnown RBP12.59□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Gm6268A2A3U9 297 aa12.58□□□□□ -0.39
Col4a4-201ENSMUST00000087050 Smarce1O54941 411 aaKnown RBP12.57□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Tpm3-rs7D3Z2H9 248 aa12.56□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Safb2Q80YR5 991 aaKnown RBP12.56□□□□□ -0.4
Col4a4-201ENSMUST00000087050 P3h3Q8CG70 732 aa12.56□□□□□ -0.4
Col4a4-201ENSMUST00000087050 R3hcc1Q8BSI6 488 aa12.55□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Becn1O88597 448 aa12.54□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Arhgap35Q91YM2 1499 aa12.54□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Mroh3A0A1D5RM54 893 aa12.54□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Apbb1Q9QXJ1 710 aa12.53□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Cspp1B2RX88 1205 aa12.53□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Sart3Q9JLI8 962 aaKnown RBP12.53□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Taok2Q6ZQ29 1240 aa12.52□□□□□ -0.4
Col4a4-201ENSMUST00000087050 Ubl4bQ9CQ84 188 aa12.52□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Atp6v1dP57746 247 aa12.52□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Eif4g2Q62448 906 aaKnown RBP12.51□□□□□ -0.41
Col4a4-201ENSMUST00000087050 Chmp5Q9D7S9 219 aa12.51□□□□□ -0.41
Col4a4-201ENSMUST00000087050 SafbD3YXK2 937 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms