RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Nlrp6Q91WS2 869 aa21.74■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Rad21Q61550 635 aaKnown RBP21.74■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Dnttip2Q8R2M2 758 aaKnown RBP21.73■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Spryd3E9Q9B3 442 aa21.72■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Zbtb4Q5F293 982 aa21.71■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Plcb2A3KGF7 1181 aa21.7■■□□□ 1.07
Col17a1-202ENSMUST00000086923 Ppm1gQ61074 542 aa21.7■■□□□ 1.06
Col17a1-202ENSMUST00000086923 Lmod2Q3UHZ5 550 aa21.67■■□□□ 1.06
Col17a1-202ENSMUST00000086923 Znf316Q6PGE4 1016 aa21.67■■□□□ 1.06
Col17a1-202ENSMUST00000086923 Ifnlr1Q8CGK5 535 aa21.65■■□□□ 1.06
Col17a1-202ENSMUST00000086923 Rtn4Q99P72 1162 aaKnown RBP21.62■■□□□ 1.05
Col17a1-202ENSMUST00000086923 Cep164Q5DU05 1446 aa21.61■■□□□ 1.05
Col17a1-202ENSMUST00000086923 Plcd4Q8K3R3 807 aa21.59■■□□□ 1.05
Col17a1-202ENSMUST00000086923 Ipo9Q91YE6 1041 aa21.59■■□□□ 1.05
Col17a1-202ENSMUST00000086923 Arid4bA2CG63 1314 aaKnown RBP21.58■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Ofd1Q80Z25 1017 aa21.56■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Slc4a3P16283 1227 aa21.56■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Zcchc6Q5BLK4 1491 aaKnown RBP21.53■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Abcc9P70170 1546 aa21.52■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Rrp12Q6P5B0 1295 aaKnown RBP21.52■■□□□ 1.04
Col17a1-202ENSMUST00000086923 Znf326O88291 580 aa21.51■■□□□ 1.03
Col17a1-202ENSMUST00000086923 Tcerg1Q8CGF7 1100 aaKnown RBP21.49■■□□□ 1.03
Col17a1-202ENSMUST00000086923 Ccer2J3QPU5 274 aa21.48■■□□□ 1.03
Col17a1-202ENSMUST00000086923 Prdm10Q3UTQ7 1184 aa21.46■■□□□ 1.03
Col17a1-202ENSMUST00000086923 Nolc1E9Q5C9 702 aaKnown RBP21.46■■□□□ 1.03
Col17a1-202ENSMUST00000086923 MsnP26041 577 aaKnown RBP21.45■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Erich6bQ9D4S6 220 aa21.45■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Clip1Q922J3 1391 aa21.44■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Rangap1P46061 589 aaKnown RBP21.43■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Adam1bQ8R534 806 aa21.43■■□□□ 1.02
Col17a1-202ENSMUST00000086923 Dbr1Q923B1 550 aa21.4■■□□□ 1.02
Col17a1-202ENSMUST00000086923 B4galnt3Q6L8S8 986 aa21.38■■□□□ 1.01
Col17a1-202ENSMUST00000086923 Dnai1Q8C0M8 701 aa21.38■■□□□ 1.01
Col17a1-202ENSMUST00000086923 IbspQ61711 324 aa21.37■■□□□ 1.01
Col17a1-202ENSMUST00000086923 Chic1Q8CBW7 227 aa21.33■■□□□ 1
Col17a1-202ENSMUST00000086923 Podxl2Q8CAE9 603 aa21.3■■□□□ 1
Col17a1-202ENSMUST00000086923 Trim26Q99PN3 545 aa21.3■■□□□ 1
Col17a1-202ENSMUST00000086923 Fbxo2Q80UW2 297 aa21.28■■□□□ 1
Col17a1-202ENSMUST00000086923 Pdcl3Q8BVF2 240 aa21.28■■□□□ 1
Col17a1-202ENSMUST00000086923 Ddrgk1Q80WW9 315 aa21.28■■□□□ 1
Col17a1-202ENSMUST00000086923 BccipQ9CWI3 316 aa21.26■□□□□ 0.99
Col17a1-202ENSMUST00000086923 Apbb1Q9QXJ1 710 aa21.22■□□□□ 0.99
Col17a1-202ENSMUST00000086923 Ipo4Q8VI75 1082 aa21.21■□□□□ 0.99
Col17a1-202ENSMUST00000086923 VgfQ0VGU4 617 aa21.2■□□□□ 0.98
Col17a1-202ENSMUST00000086923 ChgaP26339 463 aaKnown RBP21.2■□□□□ 0.98
Col17a1-202ENSMUST00000086923 Map7d2A2AG50 781 aa21.2■□□□□ 0.98
Col17a1-202ENSMUST00000086923 4933402E13RikQ9D4D2 429 aa21.19■□□□□ 0.98
Col17a1-202ENSMUST00000086923 Casc1Q6TDU8 730 aa21.19■□□□□ 0.98
Col17a1-202ENSMUST00000086923 Gm35339A0A140LHH9 1649 aa21.17■□□□□ 0.98
Col17a1-202ENSMUST00000086923 SlkO54988 1233 aa21.11■□□□□ 0.97
Col17a1-202ENSMUST00000086923 Kiaa0754Q69ZZ9 979 aa21.1■□□□□ 0.97
Col17a1-202ENSMUST00000086923 Chmp5Q9D7S9 219 aa21.1■□□□□ 0.97
Col17a1-202ENSMUST00000086923 Calcoco2A2A6M5 331 aa21.07■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Erich6D3Z6S9 713 aa21.06■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Becn1O88597 448 aa21.06■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Rrp9Q91WM3 475 aaKnown RBP21.05■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Mbd3Q9Z2D8 285 aaKnown RBP21.05■□□□□ 0.96
Col17a1-202ENSMUST00000086923 EspnQ9ET47 871 aa21.05■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Npm1Q61937 292 aaKnown RBP21.03■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Armcx1Q9CX83 456 aa21.03■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Fgd1P52734 960 aa21.02■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Map7O88735 730 aa21.02■□□□□ 0.96
Col17a1-202ENSMUST00000086923 Ush1cQ9ES64 910 aa21■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Wwc2Q6NXJ0 1187 aa20.99■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Mak16Q8BGS0 296 aaKnown RBP20.99■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Chic2Q9D9G3 165 aa20.98■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Ipo8Q7TMY7 1010 aa20.97■□□□□ 0.95
Col17a1-202ENSMUST00000086923 Gm973E9Q295 1059 aa20.95■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gm13697A2AK42 830 aa20.94■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Trim30aP15533 496 aa20.94■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gtf2a1Q99PM3 378 aa20.93■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Mre11Q61216 706 aa20.92■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gpatch11Q3UFS4 262 aa20.91■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Neurod2Q62414 383 aa20.91■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Fam43aQ8BUP8 424 aa20.91■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gtf3c5Q8R2T8 520 aa20.91■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Rwdd1Q9CQK7 243 aa20.89■□□□□ 0.94
Col17a1-202ENSMUST00000086923 Gm6268A2A3U9 297 aa20.88■□□□□ 0.93
Col17a1-202ENSMUST00000086923 Abcc8B2RUS7 1588 aa20.88■□□□□ 0.93
Col17a1-202ENSMUST00000086923 RdxP26043 583 aaKnown RBP20.87■□□□□ 0.93
Col17a1-202ENSMUST00000086923 SetQ9EQU5 289 aaKnown RBP20.86■□□□□ 0.93
Col17a1-202ENSMUST00000086923 TimelessQ9R1X4 1197 aa20.86■□□□□ 0.93
Col17a1-202ENSMUST00000086923 Sart3Q9JLI8 962 aaKnown RBP20.85■□□□□ 0.93
Col17a1-202ENSMUST00000086923 PtmsQ9D0J8 101 aaKnown RBP20.84■□□□□ 0.93
Col17a1-202ENSMUST00000086923 BlmO88700 1416 aa20.84■□□□□ 0.93
Col17a1-202ENSMUST00000086923 Pcmtd1P59913 357 aa20.84■□□□□ 0.93
Col17a1-202ENSMUST00000086923 KnstrnQ9D9Z1 312 aaKnown RBP20.83■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Atp1b4Q99ME6 356 aa20.81■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Tpm2P58774 284 aa20.8■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Rgl3Q3UYI5 709 aa20.8■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Q8BT18 775 aa20.8■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Exoc6Q8R313 802 aa20.78■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Cwc22Q8C5N3 908 aaKnown RBP20.77■□□□□ 0.92
Col17a1-202ENSMUST00000086923 Znf692Q3U381 531 aa20.76■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Stard8Q8K031 1019 aa20.76■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Mapk8ip3Q9ESN9 1337 aa20.73■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Mfap1aC0HKD8 439 aaKnown RBP20.73■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Mfap1bC0HKD9 439 aaKnown RBP20.73■□□□□ 0.91
Col17a1-202ENSMUST00000086923 Rbm10Q99KG3 930 aaKnown RBP20.7■□□□□ 0.9
Col17a1-202ENSMUST00000086923 Card11Q8CIS0 1159 aa20.69■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 103.1 ms