RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Lmod3E9QA62 571 aa20.35■□□□□ 0.85
Casc4-201ENSMUST00000078752 Rb1cc1Q9ESK9 1588 aa20.28■□□□□ 0.84
Casc4-201ENSMUST00000078752 Rsf1E9PWW9 1441 aaKnown RBP20.27■□□□□ 0.83
Casc4-201ENSMUST00000078752 Spryd3E9Q9B3 442 aa20.24■□□□□ 0.83
Casc4-201ENSMUST00000078752 Fgd1P52734 960 aa20.22■□□□□ 0.83
Casc4-201ENSMUST00000078752 Npm1Q61937 292 aaKnown RBP20.19■□□□□ 0.82
Casc4-201ENSMUST00000078752 Clip1Q922J3 1391 aa20.16■□□□□ 0.82
Casc4-201ENSMUST00000078752 AU015836B2RUM3 263 aa20.15■□□□□ 0.82
Casc4-201ENSMUST00000078752 Pak3Q61036 559 aa20.14■□□□□ 0.81
Casc4-201ENSMUST00000078752 IbspQ61711 324 aa20.14■□□□□ 0.81
Casc4-201ENSMUST00000078752 Ipo9Q91YE6 1041 aa20.13■□□□□ 0.81
Casc4-201ENSMUST00000078752 ChgaP26339 463 aaKnown RBP20.13■□□□□ 0.81
Casc4-201ENSMUST00000078752 Brd4Q9ESU6 1400 aaKnown RBP20.12■□□□□ 0.81
Casc4-201ENSMUST00000078752 Znf692Q3U381 531 aa20.1■□□□□ 0.81
Casc4-201ENSMUST00000078752 Vsig10D3YX43 558 aa20.09■□□□□ 0.81
Casc4-201ENSMUST00000078752 Rad21Q61550 635 aaKnown RBP20.07■□□□□ 0.8
Casc4-201ENSMUST00000078752 Ipo4Q8VI75 1082 aa20.05■□□□□ 0.8
Casc4-201ENSMUST00000078752 Ccer2J3QPU5 274 aa20.03■□□□□ 0.8
Casc4-201ENSMUST00000078752 Dnttip2Q8R2M2 758 aaKnown RBP20.01■□□□□ 0.79
Casc4-201ENSMUST00000078752 Trim44Q9QXA7 346 aa20.01■□□□□ 0.79
Casc4-201ENSMUST00000078752 Os9Q8K2C7 672 aa20■□□□□ 0.79
Casc4-201ENSMUST00000078752 Ofd1Q80Z25 1017 aa20■□□□□ 0.79
Casc4-201ENSMUST00000078752 B4galnt3Q6L8S8 986 aa20■□□□□ 0.79
Casc4-201ENSMUST00000078752 Tcerg1Q8CGF7 1100 aaKnown RBP19.99■□□□□ 0.79
Casc4-201ENSMUST00000078752 Dbr1Q923B1 550 aa19.98■□□□□ 0.79
Casc4-201ENSMUST00000078752 Znf710Q3U288 666 aa19.97■□□□□ 0.79
Casc4-201ENSMUST00000078752 Trim30dE9PWL0 497 aa19.97■□□□□ 0.79
Casc4-201ENSMUST00000078752 Fkbp15Q6P9Q6 1216 aaKnown RBP19.96■□□□□ 0.79
Casc4-201ENSMUST00000078752 Ccdc88bQ4QRL3 1481 aa19.95■□□□□ 0.78
Casc4-201ENSMUST00000078752 DekQ7TNV0 380 aaKnown RBP19.92■□□□□ 0.78
Casc4-201ENSMUST00000078752 Hsp90ab1P11499 724 aaKnown RBP19.91■□□□□ 0.78
Casc4-201ENSMUST00000078752 Wwc2Q6NXJ0 1187 aa19.91■□□□□ 0.78
Casc4-201ENSMUST00000078752 Arid4bA2CG63 1314 aaKnown RBP19.91■□□□□ 0.78
Casc4-201ENSMUST00000078752 Chic2Q9D9G3 165 aa19.89■□□□□ 0.77
Casc4-201ENSMUST00000078752 Prdm10Q3UTQ7 1184 aa19.86■□□□□ 0.77
Casc4-201ENSMUST00000078752 Sin3aQ60520 1274 aaKnown RBP19.84■□□□□ 0.77
Casc4-201ENSMUST00000078752 Tnnt2P50752 301 aa19.83■□□□□ 0.76
Casc4-201ENSMUST00000078752 Pdcl3Q8BVF2 240 aa19.8■□□□□ 0.76
Casc4-201ENSMUST00000078752 Baz1aO88379 1555 aa19.8■□□□□ 0.76
Casc4-201ENSMUST00000078752 Polr3glQ8R0C0 218 aa19.8■□□□□ 0.76
Casc4-201ENSMUST00000078752 Dnai1Q8C0M8 701 aa19.77■□□□□ 0.76
Casc4-201ENSMUST00000078752 Golga3P55937 1487 aa19.77■□□□□ 0.76
Casc4-201ENSMUST00000078752 Ppm1gQ61074 542 aa19.77■□□□□ 0.75
Casc4-201ENSMUST00000078752 Htatsf1Q8BGC0 757 aa19.77■□□□□ 0.75
Casc4-201ENSMUST00000078752 Plcb2A3KGF7 1181 aa19.76■□□□□ 0.75
Casc4-201ENSMUST00000078752 Ubl4bQ9CQ84 188 aa19.76■□□□□ 0.75
Casc4-201ENSMUST00000078752 NacadQ5SWP3 1504 aa19.75■□□□□ 0.75
Casc4-201ENSMUST00000078752 Apbb1Q9QXJ1 710 aa19.75■□□□□ 0.75
Casc4-201ENSMUST00000078752 Sart3Q9JLI8 962 aaKnown RBP19.71■□□□□ 0.75
Casc4-201ENSMUST00000078752 BlmO88700 1416 aa19.7■□□□□ 0.74
Casc4-201ENSMUST00000078752 Hspa5P20029 655 aaKnown RBP19.7■□□□□ 0.74
Casc4-201ENSMUST00000078752 Erich6D3Z6S9 713 aa19.7■□□□□ 0.74
Casc4-201ENSMUST00000078752 Zfp777B9EKF4 885 aa19.68■□□□□ 0.74
Casc4-201ENSMUST00000078752 Rangap1P46061 589 aaKnown RBP19.67■□□□□ 0.74
Casc4-201ENSMUST00000078752 Armcx1Q9CX83 456 aa19.66■□□□□ 0.74
Casc4-201ENSMUST00000078752 Iqcf3Q9D498 203 aa19.66■□□□□ 0.74
Casc4-201ENSMUST00000078752 CatipB9EKE5 520 aa19.64■□□□□ 0.73
Casc4-201ENSMUST00000078752 Trim26Q99PN3 545 aa19.64■□□□□ 0.73
Casc4-201ENSMUST00000078752 Kdm5dQ62240 1548 aa19.64■□□□□ 0.73
Casc4-201ENSMUST00000078752 Exoc6Q8R313 802 aa19.63■□□□□ 0.73
Casc4-201ENSMUST00000078752 Gm13697A2AK42 830 aa19.63■□□□□ 0.73
Casc4-201ENSMUST00000078752 Setd5Q5XJV7 1441 aa19.61■□□□□ 0.73
Casc4-201ENSMUST00000078752 AampJ3QN89 436 aa19.59■□□□□ 0.73
Casc4-201ENSMUST00000078752 Rrp12Q6P5B0 1295 aaKnown RBP19.58■□□□□ 0.72
Casc4-201ENSMUST00000078752 Chmp5Q9D7S9 219 aa19.58■□□□□ 0.72
Casc4-201ENSMUST00000078752 Erich6bQ9D4S6 220 aa19.57■□□□□ 0.72
Casc4-201ENSMUST00000078752 Gtf3c5Q8R2T8 520 aa19.57■□□□□ 0.72
Casc4-201ENSMUST00000078752 PtmaP26350 111 aa19.56■□□□□ 0.72
Casc4-201ENSMUST00000078752 Znf316Q6PGE4 1016 aa19.55■□□□□ 0.72
Casc4-201ENSMUST00000078752 Gtf2a1Q99PM3 378 aa19.55■□□□□ 0.72
Casc4-201ENSMUST00000078752 DmtnQ9WV69 405 aa19.54■□□□□ 0.72
Casc4-201ENSMUST00000078752 SlkO54988 1233 aa19.53■□□□□ 0.72
Casc4-201ENSMUST00000078752 BccipQ9CWI3 316 aa19.53■□□□□ 0.72
Casc4-201ENSMUST00000078752 Rrp9Q91WM3 475 aaKnown RBP19.53■□□□□ 0.72
Casc4-201ENSMUST00000078752 Gm6268A2A3U9 297 aa19.52■□□□□ 0.72
Casc4-201ENSMUST00000078752 Fbxo2Q80UW2 297 aa19.51■□□□□ 0.71
Casc4-201ENSMUST00000078752 Kcnh8P59111 1102 aa19.5■□□□□ 0.71
Casc4-201ENSMUST00000078752 TimelessQ9R1X4 1197 aa19.5■□□□□ 0.71
Casc4-201ENSMUST00000078752 Washc2Q6PGL7 1334 aa19.49■□□□□ 0.71
Casc4-201ENSMUST00000078752 Kif15Q6P9L6 1387 aa19.46■□□□□ 0.71
Casc4-201ENSMUST00000078752 Nlrp6Q91WS2 869 aa19.45■□□□□ 0.7
Casc4-201ENSMUST00000078752 Cep162Q6ZQ06 1403 aa19.44■□□□□ 0.7
Casc4-201ENSMUST00000078752 Vgll3P85442 326 aa19.42■□□□□ 0.7
Casc4-201ENSMUST00000078752 Stard8Q8K031 1019 aa19.42■□□□□ 0.7
Casc4-201ENSMUST00000078752 Smg6P61406 1418 aaKnown RBP19.41■□□□□ 0.7
Casc4-201ENSMUST00000078752 Liat1Q810M6 228 aa19.41■□□□□ 0.7
Casc4-201ENSMUST00000078752 EspnQ9ET47 871 aa19.4■□□□□ 0.7
Casc4-201ENSMUST00000078752 Mre11Q61216 706 aa19.4■□□□□ 0.7
Casc4-201ENSMUST00000078752 Atp1b4Q99ME6 356 aa19.4■□□□□ 0.7
Casc4-201ENSMUST00000078752 Eif2s2Q99L45 331 aaKnown RBP19.39■□□□□ 0.69
Casc4-201ENSMUST00000078752 Arhgap27A2AB59 869 aa19.39■□□□□ 0.69
Casc4-201ENSMUST00000078752 Rbm10Q99KG3 930 aaKnown RBP19.39■□□□□ 0.69
Casc4-201ENSMUST00000078752 Plppr3Q7TPB0 716 aa19.38■□□□□ 0.69
Casc4-201ENSMUST00000078752 Znf326O88291 580 aa19.37■□□□□ 0.69
Casc4-201ENSMUST00000078752 Rgl3Q3UYI5 709 aa19.36■□□□□ 0.69
Casc4-201ENSMUST00000078752 Neurod2Q62414 383 aa19.35■□□□□ 0.69
Casc4-201ENSMUST00000078752 Eea1Q8BL66 1411 aa19.34■□□□□ 0.69
Casc4-201ENSMUST00000078752 Paxip1Q6NZQ4 1056 aa19.34■□□□□ 0.69
Casc4-201ENSMUST00000078752 VgfQ0VGU4 617 aa19.33■□□□□ 0.69
Casc4-201ENSMUST00000078752 MsnP26041 577 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms